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Last updated: 2022/11/18
NameA_SariMG_comp29216_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_collagen_alpha-5(IV)_chain_[Papilio_machaon]
Ontology
GO:0002119 P nematode larval development
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005604 C basement membrane
GO:0007517 P muscle organ development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030198 P extracellular matrix organization
GO:0050714 P positive regulation of protein secretion
Transcript
Level
FPKM:15.20 TPM:15.25
ORF EntryO_SariMG10929_5prime_partial:A_SariMG_comp29216_c1_seq1
Sequence
(Nucleotide)
CGCGGCACAGCCATGTCGGGCCCGGCGCGTGTGCGTTTCAACGCGCTCCATCTCGTGCCC
GCCGCGCTTCTTCTTCTCCTATTGAAACCAAATCCTGCATCAGCAGTAATTTGTAATCAA
ACATTATGTGATTGCACTGGCTTGAAAGGCGACCGAGGAGACGTTGGACCTCCGGGTATC
CCTGGTTATCAAGGGGATTATGGCGACGATGGCCCTGAGGGTCGTATGGGAGTTGTTGGA
GAAGTCGGAGACTGGGGTGATCGTGGCGATATCGGTGACAAAGGAGAACGGGGTGTGGAT
GGACCATATGGCCCGAGAGGTTCTCCAGGCTTACAGGGTCCATCGGGATTGGAAGGAGTC
GTAGGATTCGCTGGTCTGGATGGGTGTAGTGGTGTAGACGGAGCTGTAGGCCCACCTGGT
AGGATAGGTATTCCTGGAGATAGAGGCATGCCTGGTCCATATGGAGAAAAAGGTAGCCAA
GGGTTAGCGGGTGAAGGAGGTGTTAATTCCAGGGGAGCAAAAGGTGATCAAGGAGATTTC
GGATATTCTGGCACTCCTGGTCCTATGGGGGTGCAAGGGTGGAGAGGAGACAGTGGTCTG
CGTGGAGAAGAAGGTGATCAGGGCCCGATTGGCTTAAAAGGAGAACCAGGATATAGAGGT
AACACTGGTGATGATACCATCGGTCCAGCAGGTGAAAAAGGAGATCAAGGAGAAACAGGT
GCACCAGGTAAAACAACTAGGGTCGTTATAGACCATCTTCAAGGTAACGTAAGTGTTGTA
ACAAAAGGAGAAAAGGGAGAGAAAGGCTTGGCTGGTCAACAAGGTGTCAAAGGAATGAAA
GGAGACCTCGGATCAAGAGGGCAAGTAGGATCTTACGGTATTAACGGTCCACAAGGTTAC
AAAGGAGATCAAGGCGATGAAGGACCGAGAGGTAAACCCGGACATAGGGGTGAAGTAGGA
CCACCTGGCTCGAAAGGAGATAAGGGCGCTCCTGGCTATGCTGGACCCGATGGTGAAGAT
GGATTACCAGGAGCAAGAGGAGAAGAAGGAAAAATTGGAAACCCTGGACCGCAAGGGCCA
CCTGGAGAACCAGGAATTTTCGACGAAACTTTAAATGAACCATTACTACCTGGATTTGCA
GGACCACAAGGCCCTGAGGGGCTTGTAGGACCTACTGGACCAGCCGGTCGTAATGGTCCG
CCTGGTTTACCTGGCATTATGGGATTACCTGGTTTGCCTGGAACAAAAGGATTTCCTGGT
AGGATGGGAGCTCCTGGTATTTCACCGAAAGGAGAACCTGGAAATGATGGTTTTAAAGGT
TTGCCAGGTCTTCAAGGAGCACAAGGGTATCCTGGAGCAGAAGGAATAATGGGTCCTAAA
GGCTTTAAAGGAACCACAGTTAGAGGACCAGATGGTGAAGACGGTACACCAGGTTTAGAT
GGAATATCCGGTTTGAGAGGAGATCGAGGTGAACCGGGATTTATAGGAGCACCTGGATAC
CCGGGAAGGGGTGTTTATGGAGCGGGACCACCTGGAGAAGATGGTCCACCAGGGCCTCCA
GGCATTTTTGGCGAACCTGGTCAGCCTGGTCGACCCGGTTTTAACGGTTTAAAAGGAGAA
CGCGGTGATAATTGTCCGTTCTGCCCATCAGGACAACCAGGGCCAAGAGGACAAAGAGGT
GACGATGGCTTCCTAGGGCAAGCTGGCTTCCCCGGATTCGAAGGCCTACCAGGACCACGT
GGTCAAAAAGGTTTGCCCGGGACGTCTGGGACTCCTGGAGCAAAGGGACCGAAAGGCAAT
AAAGGACAATCTGGTGTTGTCGGGCCACAAGGTCCTAAAGGTTATCCAGGTAATCTCGTT
ATGCCACCGAAGGATCTAACTATACCAGACGCTGGAATACCAGGAGATCAAGGTTCCATG
GGCCCCTTTGGTCTACCAGGAAATGCCGGATGGCCTGGACTAGTGGGTGATTTTGGCATA
AAAGGCGTTAAAGGCAAAAAAGGCGACATAGGATCGCCCGGATTCCCGGGACGCAATGGA
ACAAGAGGACGTGATGGCTTTCCTGGTTGGCCTGGTGAATCAGCAGATATTCCCGTGGTA
TTCCTACGCGGTGACAAGGGAGACAGTGGAATCAAAGGTGAAACTGGCGATATAGGTGAA
GAAGGAGAAATAGGAGAAGTGGGTGACTCTTCGAAACATTTATATAATACGACCGGTGAC
AGGGGTATACCTGGTGTATTCGGATTAAAAGGCATACGTGGAAGAAAAGGTCTGCGTGGT
GATATGGGATATGATGGATTTCCTGGTGTTCGAGGAAATCAAGGAGTGCCAGGAATTACG
ATCGCTGGCATCAAAGGCCTGAAAGGATTTCCAGGAGACAAAGGCGATATTGGTCCGTTT
GGGGAACTAGGTGTCCCAGGACAACCCGGGCCCGTCGGTTATGCAGGAAATAAAGGTTAC
AAAGGATCTCGGGGAGATATGGATACGGCTATTATTCCCGGTGAAAAGGGTAATTCCGGT
GTAGATGGAGAGCGTGGAGAAGCTGGAGAACAGGGTTATTCAGGTTCACCAGGACGTGCT
GGTGTTATAGGACTAAAAGGACAAACTGGGTTACCTGGAGACGTCGGCCCTGACGGACCC
ATTGGACCCAGAGGACGCAAAGGGTTTAGCGGTATTGAGATACAAGGAGCTCCAGGAATG
CCTGGTAGAGCTGGATTATCAGGAAAAATGGGTCCAATTGGTGAACCTGGCTTACAAGGA
TACAATGGCTTACAAGGAGATATGGGACCTAAAGGCATGAAAGGAGAGGCAGGGCGTTTT
GGACTAAGAGGACAGTCCGGTGAGGCCGGGTCTGTTGGTTTTCCCGGATTCCCCGGAATG
ATTGGAAGACCCGGATCAACTGGGCAATTCGGAGAACGAGGAGAAACTGGTCCTCCAGGT
TTCATTGGAGAACCTGGACGGATCGGTATAATAGGCCCACGAGGTTTAAAAGGTTTCCGT
GGTGATATAGGCATGCCTGGAAGCCCTGGTTTGGATGGTTGGCAAGGTGCAAAAGGAGAA
TCTGGTGATACAGGATTTATGGGACCACAAGGATTAAGGGGGGAAAACGGTGTAGATGGT
ATGAAAGGAGACCTTGGAGATCGTGGCCTCAATGGTGTTTTTGGCAGACCTGGTTCACCT
GGATTCAATGGTCAAAAAGGTGAAGAAGGAATGCCAGGCTTAAACATAGAAGGACCAGCA
GGATATAAAGGCGAAAAGGGAAATACGGGTTATCCAGGAAGACTCGGCTTTACAGGAGTA
AAAGGCAGTATTGGTGACAGTGGTATACCTGGCCGACCTGGCGAACCTGGGTACCCAGGG
ATTCAAGGTTCTCCAGGTATTCCTGGAAGACATGGATTTGATGGTATAAAAGGTAAACAA
GGTCCTGGGGGTCGTACAGGTGAGAAAGGAGTAAAAGGTAATACAGGTTATTATGGAGAA
CCTGGACGAATGGGAGCTCCTGGACTTCCAGGTGACCAAGGGTTACAAGGATCAGTAGGA
CCAAGAGGATTTACAGGAATTAAGGGTGTAACAGGAGATATAGGTTTAAGTACAATTACA
CCAGCAACCAAGGGTGACATAGGAGATATTGGAATGGTTGGCTTCACTGGTTCTGGCGGT
GAATACGGTGAACCTGGTTTCCCTGGACAAAAAGGTGAAAAGGGAGAGCACGGAGAAATC
GGCCTTCAAGGAGAGTATGGAGATGATGGTTCTACTGGAAATAAAGGATTACGTGGCGCT
ATGGGTCCTCAAGGTTTTCCTGGTCTTAATGGTGAAAATGCTCAAAGAGGTGAACAAGGT
AAACCAGGAATTGATGGTCTTTCCGGCTGGCCAGGACCTATGGGTCAAAAAGGCGCACCT
GGTGAATATGGTGTTGATGGACCTGTAGGTACCCCTGGTCAACCAGGATTGACGTTCCAA
GGGCCTAAGGGTGATGTAGGAAATGATGGATGGCCAGGACGACAAGGTTATCAAGGTATA
CCTGGAGCTCGTGGTATGGAAGGAGCACCTGGATTAAAGGGGTACAGAGGTGACTTAGGA
GAGCCCGGTATTGCTATAAGTCCGAAAGGTCAACGTGGAGAACGAGGTTGGCCAGGAATA
GAAGGATTAAAAGGAGAACAGGGAGAAAACGGGGAATTTGGTTTAGATGGATTTACAGGG
CCAGTAGGTTTAAAAGGAATAAAAGGAGAAAGAGGAGATGAGGGTGAAGAAGGTTTCTTT
GGAATCGCTGGACCTAAAGGAATAAAAGGAGATCAAGGAGAGGGCCTACTTCCATCTGAT
ATTCTACCCGGCGAGCGTGGTGAAACCGGTTTTCCAGGTCTTGATGGCCGGCCAGGACTT
AATGGAATGCCAGGAAAGTTTGGTCCTAACGGCATCCCTGGAAAAAAAGGTGAAATAGGA
GATATAGGTCCAATGGGATCCATCGGAATACCAGGAGCCCGAGGCTTACAAGGAATCCAA
GGCCGCGTAGGATTAAAAGGATTCGAAGGTCTTCAAGGATCTATAGGTCGACCAGGTGCA
CCTGCACCACCTCCTCCAATACCAAAATCACGTGGATTCTATTTTACCATACATTCGCAA
ACGAGGTTAATACCACAATGTCCTGCAGGAACATCATCGCTGTGGGAAGGATTTTCTTTA
ATTCACATCGTTGCTAATGGGAAAGCTCATGGCCAAGATTTAGGTGCCCCTGGCAGTTGC
TTACGCAAATTCTCAACAATGCCATACATGTTCTGTAATTTGAACAACGTTTGTGATTTC
GCTCAACGAGAAGACTATAGTTTCTGGCTGTCGACGCCAGAACCCATGCCCATGGCTATG
ACTCCTATACAAGCAAGAGACGTAGGCACATATATTTCAAGATGTCAAGTTTGCGAAGCT
CCGACACGAACGATCGCTGTACACAGTCAAAGTAATACAGTACCCACCTGCCCTAATGGC
TGGGAAGAACTCTGGATCGGTTACAGCTTTTTAATGCACACCGCTGGCGCAGATGCATCG
GGACAAAGTCTTATATCTCCTGGGTCATGTTTGCGAGAGTTCCGTAACCGACCATTCATT
GAATGTAACGGTCTCGGCCGTTGCAACTATTTCGCCACAGCCGTCTCGTACTGGTTATCT
ACTATAGATGATAACAAAATGTTCTTGAAACCAGAACAGAAAACGTTGAAAGCCGATCGA
GTGACCAAAGTCAGCAGGTGTGCTGTATGTATGAGGCAGTGGCTAGGTCAACGACCAGGC
GCTGTTTACCCTGGAGCGGATGTAGGGTCCGTACCGAAGGAAGTGCAACGCAGACCAAAT
CCTCCGGGCCGTCGTCCATACTACCCGAGACAAAATGGCTACCGTCGCGGTCGCATAGTG
CGCGGAAGACGCCGACAGTGAACAATTATAAACTTCACCATGTGATATATAGTACTTTAA
TAAAATTAATATTTGTTTTTAATTAATCATTCAATACTTCTGTGAAATAATAAATGTGAA
GTAACATTTACAATGAAAATTATATATTATTCTATATATTAACTCTATATAGGACTAAAA
CCACTGCCATTTGAACAATTTATTTACTAATAATTATAATTAAGACACAGTGTGTCCGCA
TAATAATTATGGGATACGAAGTACTTATAAATATAGTGACACTAACTTTTGTAATGTATG
ATATAAAATACGTTCCTACACAAAAATTTACTTAGTATCAGTCTTATTCTATTCATCCTT
TTAAGAGATCTAACAAGTATCTCATCGTTTAGGGTAGGTACCAAAATAAACCAGCATTTA
TCCATCTACCTAGTCTCCTCAATTAGTACCTAGTTACAGACTTCATAGTCAGGTAATTAA
ATAGGTACATAACTTTGTAAATAAGTAGCTACTTGTATGATGTATAATAAAATTCGTG
(5938 bp)

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