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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29208_c2_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_syntaxin-1B-like_[Papilio_xuthus]
Ontology
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0006936 P muscle contraction
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007349 P cellularization
GO:0007482 P haltere development
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017157 P regulation of exocytosis
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042335 P cuticle development
GO:0043195 C terminal bouton
GO:0048278 P vesicle docking
Transcript
Level		FPKM:10.25 TPM:10.28
ORF EntryO_SariMG10913_5prime_partial:A_SariMG_comp29208_c2_seq4
Sequence
(Nucleotide)
GAGAGCGTGGTGAGTTCGCGGGGGCGCGGGTGCGGGCGCGGACACACGCGAGCCGCTAAC
ACTCGTTATCAGTCGGTGTGTGGAGCGAGGCCGGTGCGCACCGCCGCCATGACCTGCAAG
GACCGGCTCGCGGAGCTGCACCACCTGTCGAGCAGCGCGGCCGGAGTATACCATGACACC
GTACAGCTGGAGCTGGCGGACCCGCCGGACAACCTCAAGGAGATCGAACAGATATTCCAC
GAGGTGGAGACCGCACGGGTCCTACTCGACGAGCTGAGAGACAACACGCAGCTGATCAGA
CGCTTGCACTCTGACCCTACCTTCCACCACAACCAGCAGTTGCAGGAGCGGCTGGAGGCG
GCAGTGTCGGCAAGCGCGACGCTCGGCGGTCGGCTGGGCCCTGCGCTGCGCAGGCTCGAA
GAGCGCGCGAGCGTTGCGGGGGGCACGGGGGCGGCAGGCCGGGTCGCGCGCCTCCAGTAC
CTGTGTTTGCGGCGGCGGTATGCGGAGGCGCTGCGCGACCATCACGGTACACTCGACGTG
CTGCGGGACCAGCGCCTGCACCTGCTACACGCGCAGATAAAACTCACTAACCTCGCGATA
TCGGACGACGAATGCCAGGCGCTGCTCGATTCCAACAACATTTCACTTTTCGTCGACAAC
GTGCGCGCGGAGACTGCAGCGGCGCGCGGCGCTCTGCGTGCTGTCGAGGCGCGGCACGAG
GAGCTGACGCGCGTCGAGGTGGCGCTACGCGACGTGCGCGATCTCTTCCAACAGCTAGCG
ACGCTGGTCGCGCTGCAACAGGACCACATCGACAGTGTCGAGTACTACGCTCTGCAGACG
ACGCACCACGTCGAATCCGGCGGACAACACTTGCTCAAAGGCACTGTTACCCGGACAAAA
GCTAGAAAGAAAAAAATGAGTTTGGTGATATGTCTCGTGGTGGGATTCATGCTTGTACTG
TTCGTGCTGGTGGTCACGTAGCGACACGCGACAAGACGCGCACGGTCGCGTGTGCTTTCG
CGTGCGCCGTCGCCGTGTTGTTTTGTGACAGACTATAATACTTAAGAGATTAGTAATTAA
TAAGAATATTTATAAAATTCAACTCATTATTTAAATCGTGCGTATTAATTTGCCAAATAT
GTTGAGAATAATGAATTTCGATCGTGTTGTGATCAACAAGGCGATTGGTTGTGGGACCAA
GTTCGGGGAGCGGGCAACGACGACGAACAAACCTAGTCATGTATGTATGTTCCAAGATAA
ATTAATTATTGGTGTATTATTGTATTCAATAAGATTTTATTTAACAATGCGAATAGATTA
CATTAAAATTATTATGATTGTTTTTATTATATTATTAATTTACGGTTGAACAACATTGAA
AGACCACATTTTGTTTGTGCTAATTTATTATATAAACCTAAAACAATAAAACACAACTGA
ATATTGTTAAAACACTTAAGCTCGACAATAACTACTAAACAAAAAAAAGAAAACATCTTT
TCTGTTCCGATCTGTTTTATTTTTACTTTTTTATTATTTATAGGCTCAGGCGTTTTGATT
GTGATTTAATCAGATGTTTTGATATTTTGCTGTTTTGGTTAGGAAGTTTAGTATTCATCG
TTATCTCCAGATTCCTAATGTGGCACTATCTAAATACGATGTATTATTCAAACGAAGTTT
TAGGGATCCATTTCCGGTATATAAACATTTACCTTCACTGCTTGCGTTTCTCTCACTGCC
CAGCCTAATTGTCGCAAAATTAAATGGCTATTTCAGAAAGAATCTAAATTTACACAATAT
TACAGAGAATATGATTTCTAAATTTTATAGAGTTAGCAAGTACCACTTACATGTTAATCT
GTTGGAGAATCTGTAAAAAGTGAAATGCGCAGTCTGCCGATTTATTAACATTGGAAAATC
TACTTTCACAAATTAGCGACGATAGGCGCCACTAACATTATTAATTTAGAATTGAAGCCT
CCAAAATATTTGATTAATAACGAAATGAATCTTAAATCTGTTATTACTTACAATTAAATC
CTTAACCAAATTAATGTCATAACATCTACTTATACAAAGTATGCGCCTCGTGGCGCTCAA
AAAATTAATTATTCACAATTTTAAACTATTATCGGGTTCATCATCTCCCTGCCCTTATCC
TAGTTTTATTTGGGGTCGGCGCAATATGT
(2189 bp)

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