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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29200_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_04775_[Danaus_plexippus]
Ontology
GO:0000339 F RNA cap binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005846 C nuclear cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0016246 P RNA interference
GO:0022008 P neurogenesis
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0035195 P gene silencing by miRNA
GO:0045071 P negative regulation of viral genome replication
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0051028 P mRNA transport
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:12.72 TPM:12.76
ORF EntryO_SariMG10889_complete:A_SariMG_comp29200_c0_seq1
Sequence
(Nucleotide)
GAAAACTTTATATGTATAACAATTTACACTTTGTCGTCGCAATATAATATATTTCCTTCA
ATCCATTGCCTGTTTATTGAGGGTTTGAGGCAATTGACACGTAACTTCATTCGTCATGAA
CAGTCTTTATTTGATGCGGATGATCGTGACGGCGCTATGCCGTCAGCGCAACGAACTGGT
GGAACACGTCGAGGATGTGAGGGTCCAGGTCCTGGGTGAACAGCAACGTTTCCAAGGTGC
TGCTGTACTTCTGCACTTGTTCGTGATGAACTAGGAACACCTGCTGCAACCGTCCGACGG
TGCTCTTGTACCAGTACGTGTCCGGATCGCGCGCGTCCGTGTCCGCGCGCACGAGATGCT
CCGAAAGGATCATTATGAATCGCTGGAACACGATCAGGAAGAGGCGCTTCTGGTCCATAT
GCGCGGCCTCTAGCCTCTCCTCCATCCGTTCCACCGCCTCCTCGGTGGGTTTGTCCTGAT
CCTTCTTCTTTTTATTACTCTCATCTTCCGAGTCTGAACTGCTAGAGTCTGCTCTCGCCA
ACGCTTCCCTCGCCTCCTGGAGTTCATCACTGAGTTTGGAGACGTGTTTGTTCATCTTGT
CTATGGTGAGATGCAGCATCTCCCAGAGGCTGGCGTGCGTGAAGTACGGCGCCATCTCCT
TGGAGAAGAGCCAGGTCGCGACGGCGCCGCACTCGACTATCTGGGTCTTCAGCATTTTGT
CGACGAGGACGGTCACCATCTGCGTGTGCCGCTGCCACAGCTCCCATACATTGCGCAGTA
CGCAGATTTGCGCTTCTTCGGATTCCGCTAAAATTTTGAACACATAATGGAACTTGGATA
TAGCGGCGAAACTGTGCGATATGCTCTTGCTGCCGAGATTGAGCAAGGTCTGCACGAACA
CGTCTATCTTCAATGGGTTATGCGGTGAGGCTTGCGGAGCGGGTTGTTCACCTTCGCGTA
GCGGGTTCGGCAGTTCCCTGAGCACGTTCAGTGCTTCTTCCGGGGTGCATTTGTTCCGAA
CGCAGACCACCAGCTGATGTGCGGCCTCCGTACCCGGCAGAGACGCTGCACCCTCCATAG
AATACTTGTAAATGGGTTCCGGCTTTAGAGGTACAAAGGCAGCGAATGTTTCTGGTGTGA
TTTCTTTAATCCTTTGATGGTATGATAACCTTAAACATTTACCAAGGACTTCCCTAATGA
AACGTGGTTTCGGATGATCTGGGTCCAGTTGAACACACCCTTCCCAATCTTCCCATGACC
AACGGTATTGGAAGTTGCTTAGATGATATGAAAACCAATTTACAAATCTATCAAAACAAG
CTACATTCATGGTGTCAATCCTCATAAATAATATTTCTGTGGCTTGGGCTAACACTTGCG
GCATCGTTGAAGGCTGAAGCTTACATAGTTCAATAAATACTGATCCATAACAGATCTCCA
AGTATCTTGGTCTCGGCAAGTTAAACAGCTCCGCAAATATGACTTCTACAATGCAATATT
CTAAAGGAATCTTAGCTTTATACGGAAAACATAATAGTTGTGCAGCGCACTCTTTACGTT
CCAAATGATAAGCCTCTATGATATTATGCAAGTGTTCTTCAATTAGGAACCGTTCAATAG
AATGGGCTCCTGGCAAAACTGGGCCATCAGGGCAGTCTGTGTAATCAAACATACGAAAAA
TGACACGCGGCATTGGATATGTGTCATTGTCATTGTGTGGTGGAGGCTGAATTGATGGTA
ATGTATGTTGTAAAGCTTCACACAATATTGAATCGAATGCCAGATAAGGTCTTGGTATGT
GTTTTTCAGACCAATTATCCTGCTTTAACTTCTTAATCTGAGCCCACAGACAATCTAAAT
ATTCCTCCTGTAAGTGTGGAGAATCTGCTGACCAAACTTTTAATGCTGGCCAATGTTTCT
TACTGCGCTTATTTAAGAATACTTCAATTGTGACTAATAAATGATCCAGCTGAGATTCTT
TTTTCTCATAAAGCTCTCTACCAACCCAAGGCAAAGTAGATAGAGTAGCAAACACATACC
AATCGCGTCTCACTTGTGGTACACCATCCTCATTTGCACAATCAACTAATGTCTCTAATA
GAGTTAAAAGAGATGATGCTGCCAACACATGGCAGTTTACTAAATCTGAGATGAATCGAA
GACAGTATCTCGCTGCATTCCATTTCCCAGTTTTCAAATTTTCTTTGAACGTCTTTACAA
TATAGTCAACAAATTCACCACCAAAATTGTAGTTTTTTGCATTGAGTAAACCAACGAGTG
TGGCGTATATAGTGCATTTTTCTGGCATACGTATAGCACATTCTGTTAGTATCCGTAAGA
TTTTGACCCTAAAAGCGCTTAAGTCTGCCTCTAGTACGCTTGCTAATCCTTCTAAGTTGC
TCTCTAAACTAGAACTACTTTTTTCTCCAACTCTAAGTATTAACGATTCCAAGCGATCCT
CTATTTCCTGGTTCTCAGAAACACGACGACGTTTGCGATGAAGACGATCGTAACCATCAT
CTTCTTCGTGTCCTCTTCTACGGTTCATAGCCGTTGTTTATTCAGAAATAGAATAAATTC
GTGATGTAATATACAAATGAAAAAAATGTTTCGAAT
(2616 bp)

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