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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29140_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RNF126-B_isoform_X1_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070534 P protein K63-linked ubiquitination
GO:0070936 P protein K48-linked ubiquitination
Transcript
Level		FPKM:6.03 TPM:6.05
ORF EntryO_SariMG10802_complete:A_SariMG_comp29140_c0_seq2
Sequence
(Nucleotide)
TTCAATGCACAGTTTTACGGGCAAATGTTTGAATTTAAGAGAAATATTTTTACTTTACCT
TTTTTTTTTTTTTAATTTAAGTTTTTTTTTAGGGGCTTTTGACATAAGTCATATCAGCCC
CATCATAATACTTTATCTTAGTACTACATAATTATTTGGAAAATAATTTGTGTACCATAT
AAAAAAAAAAATCAAACGCAGTGAAGAACATATGAAACGTTGGCGCACCCGCGGGTACGC
AGCTAGTCTATTAATATAATGAAAAAAAAAATAGTTCTAAATTATGTAGTTATTTACATC
TTTGTTATTATTATATACTCCTAGTGTTGTAGAAACTTCTAGTTGCGTTACCTGACTAAT
TTCATTACGTGTTCATCTACAAAAAAAAATTAAAAACTCCAGATTTTGTACTCCAAGTAT
AACACTATAATTAACGACATTATATATTATATTATCCTCATAGATTTAGAACCCGTATAT
ATAATGAATAGTCGATAATGGACTTGGTTAATGTTAAGATATACTTTATTTTCAAATTCA
ATGAACTAAACGAAATGCCTTCGAGAATTATTTACATACTCATAAATAAAAAAAAATTAA
TAATGTCATCACTATTCCACATATATGTTTATTATTTCGATTCTAATAATTTATCCCGTT
CATGTCATGTTATAGAACTAATTTCATAACAGTTCTCTGTTAAATTCAAATGTTTCCGAT
TAAATAACTGATCCATAGATCTTCAAATTTATAAACAGATTCTAATTTACACAGACAATT
TCATTACAAATGAAAGGCACGCGACAATTAATATTTTCCTTTATATGACCATAGCACTTT
TCTATATTACAGACAACTTTAATATCAACTATTTATATATATATATACTTTGATATAAAC
AATAATTCTTCTCACGATGGTCGTATTCATGTATAATATGATATATCTTTAGTTTTATTT
ATTTATTCTCTTTATACATAACACATAATAAACACTCGATTTATTATTGTCCTTTTAGTT
ATATTATGAAACACTTGACACTGCATTAACGTCACCAACACAACCACTGTATAGATGAGA
GTTGAGTCACAACGGACAGTACGGCGTCCGGGGGGACAACATGGCGTCCGGCGGTACAAC
AAAGCGTCCGGCGGGGAACACGCTGTCCGGAGCGCAGAGGGATACATTAGTCATAGTCAA
TGTCCATGTTGTACTGGCGTTCCCTCTCGTTCGAGTCGAGGGATGCGGTGGAGTTGGTGT
TGGTAACCGAGGAGCCAGTGGAGGCAGACCCTGACGAGCTGCTCGTGTCGGCGAGCAGAT
CCCAAGGCGGCCTTATCGGACCAATAACGCGACGTCTTTGATCTTGACGCATCAACAGAC
GCGTCAACAGCGCCGGTATTGCATTCGTAATTGTAGCCCGTGGCGTAGCGGCCGGTCGGA
CGTTGGACGCGGTGGTGGTAGTGGCGGTGGCGGCGTTGGGGGCGGTGGCGGGACCAGCGG
GCGTCACGGGGTTAGCCGGTGTGACGGGCTCACCGGAGGGGACGCTGCCCGTGGTAGGGG
TAGCGGACAAGTCGACCGGCTCGTCCGTTAACATCGAGCGTCGACAGATCGGACAGGTCG
CGTGCAGCTGAAGCCACGGCGTTATACACGTCGAATGGAATATATGATCACACCCCAGTT
TCGATACTGTTTCACCTAATTGGAAGTTTTCCCAGCATACTGAACATGATGCATTAGCTG
TGATATGTGCATCGGTGATTTGTTCACTAGGTAAGGCTGCTATCTGGTCTCGGGACAGGG
GCGGAGGCCCAGCATTCTCTAACTGTCCTAACAACTGTGTCACAACTGCATCCAATCCTT
CACCACCGAAAACATAGTCTCCAGGTGCTCCTATGAAGACGAAGGGCGCTCCGGCCGTCA
CCGCGCCTGAGCCAGGCCTTCCACCACCAATCGTCCAAATGATATGTTCCATCAGTGTTT
CTCTTCGAGGGTCAATGCGCGACCTTCTGCCGGACATTAAAATTGCGAGCTCGTTTAACA
ACGGTGGTGGACCCTGTGTGGTGTGAACATCATCAGAATCTCCCAAATTGCTAGCATCAT
CAATGTTACTCATTTCATCAATATTACTCATGTCTGCATCACTAAAGTTATCATTAGTTA
ACACTCCAGAGTCTGTATCGTTCTCCAGTTGCTCAATAAAGCCACTTGAACAGAATGGGC
ATTTGTAATCCTGTAAAATGTCTTCAAATTCAATGTTACACCTGTGACAAAAGAATCGAA
TAGTTGGTCTTCGTTCTACCATTGCATCAGCCATAGTAGTAGTTTATATAACACAAATAC
ACCGATAAATATTTAATATTTTAATATATACGCTTTTTTATTGTGCTTTCAAACTCTCAA
CAAAAATTTATCAATCGCCATTTTTTG
(2427 bp)

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