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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29114_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_HIV_Tat-specific_factor_1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
Transcript
Level		FPKM:10.21 TPM:10.24
ORF EntryO_SariMG10748_5prime_partial:A_SariMG_comp29114_c0_seq1
Sequence
(Nucleotide)
TATTTATCTACTGTTTCAAATAAACAGCATAACAAAGACGAATATTAAATTATAAATTTT
CAACTACAAAACCTAAAAATCATAGCGTTTATTTTATTATTAACAGTTAGAAAGGGTTTA
TGCGTTATTATAAACCACGAAGAGTCCACAGTTAAAAGAAATCGAGAGACAGAGATAGGT
TTTAAAGTGATGACAAAAAAAAAGAAACCTCATACATGGAACTCGAAAATTGAGGAGCGT
TTTCACAAAACATTACATGTCTTTTTCGACAATTTATTTATTTTTCTAGAGGTAAGAAGT
TTTAATAAGTTATGAATACTTTGTGGTAGATTTTGAGCAGTTTATGTATTGGTTACAGAA
ATTTAGTTGATGTCAATAAAATCAGATATGGAGAAAGAAACAAAACAACAGAAAAAACTT
TTTGTTGAGACGATGCTTGTTGTAACGCTTTGTGAAAACACTCCTCAATCTTATTTTTAT
TTCTAGGATACAACTTTTTCTATTTGATTCTCAGTTTCTGGCTTCAGTATTGTATCTTTG
TTATTTCTTGTGTCCTGTTGATTTTTGTCATCCTTTCCTTCTAAAAACTGATCCCATTTA
TCAATCCTTTTATTAATATCTGCATCAGTCTCTGCAATTTTGTATTTAGTTCTTCCATCC
CATATTTCAGCTGTAATTTGTCTTTTACCGAACCATCTTCCATTTATCAACTGGACAACT
GCATCAGCTTGTTCAGGTTCCTTCATGTTGATCTGAGCTACACCATCAGGATGTCCATCA
TAAATGACTACTTTACGTACATCACCACATTTTGTACATTCCTCTCTCAAATCTTGTTGA
TAGTCTAGGATCAGTTGTACCTCTTTGTCAAAGTCACTTGGACTAAACAAATTTTTTACA
ATAACAACTTTCTCATGTTTAGCTCTTTCTCCAATAATTTTCTCTGGTCTCCAATCAAAC
AACTTCTGTTGCATTTTCTTGATCTTCTCTAACTCTTTCTTCTTCTTTTTTTTAGGTTTC
AGAGCTGGATTGTAATCACCCTTTTGTTGGAAACGAGCTCTTTCTACTTTTATGGTATTA
CCTTTATAATGACTACCATCTAACAACTTTAATGCTAAGTCTACAGACTCAATTTTTATG
TAAGTACATAAAGCATCTCCTTTAAAACAATTCTGGTCTTTGTCCATATACAACTTTATT
TTCATTTTTTGAGAATTAGGATCTCGCTCCACAAGACCACACTTTTGCATTAAATTAACA
AATTCCTCTTCATCCAAGTCAAGTGGTAAGTTAGAAACATACACCTTTGTATTTTTTTCA
TCAGACTGTTCAAACCATTGCGGTTCGTTCTTACGTTTAACACCAACAGGGTCTACACTC
TTAACCTCTTCTATTTTCTCTACTTTCTCCTTTTTGTCTTCTGTTTTATTATCAACAAAT
CCATATGACATTTGGTAATAAGCTAAGAATTCATCATCTACTTTAGGAATCCAAGCTTTT
TTATCAACATCCCAGAAGTACTTTGATCCATCTGATTCGGTATAAATATGAGTATCATCT
TCGTAACTGTATACTCTACCAGGAA
(1585 bp)

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