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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29102_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_1_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:6.01 TPM:6.03
ORF EntryO_SariMG10715_complete:A_SariMG_comp29102_c0_seq1
Sequence
(Nucleotide)
AAAATTTCTAGTTTATACGCTGAAATAGGCTATTGAGCAATATTTCATACGAAATAGTGT
ATATTGTTTGATTTCGTGTTAATTGAAACATGGGATTTATAAAATAGATTAAAAAGCGTA
AAATAAAATAGCTACAATGTGTGACAGTGATGATCCTGGCGACTCTAGTCGCTTTGGTTT
GGATTTGACCGGGTTTCTATTTGGAAACATTGATGAATGCGGTCAATTAGAAGATGATGG
TCTCCTTGACGGTGATTCCAAACGTATGTTGTCGTCACTCAGTCGTTTGGGTCTGGGCTC
TATGTTGTCTGAAGTCTTGGAATCAGAGGAACCTAGTAAAGAAGAAGATGAAGTAAAAGA
TTATACTCAAAAGAGCCCTTCTGCAGTTGATTTTTTTGATATTGATGATGCTGCAGAAGA
GTCCAAGGATGTAGATTTAGTAACTAACCAGGATTCAAAGGGCAATGAAAAAAATATATG
CACGGAGGTGAAAGACTCGGCTGAAAATCCTTTAAACAATGTAACTACAGAAGAATCTGT
AAGCGATTGTCCACAGAATGATGTAAAGGAGGAAGATATAAATGAAGAGAATGTGAAGGA
AGAGGTTATTATAGATAATTGGAAAGATGATGAGAATTATTATGAACAAGAAGTACGGAG
TACAAATGATGAAGGTTATGAAGGCGACATGGAAGGTGATGGTGATCTCATGCCCCCACC
TTCTACAATACCTCACTTTAAAATTGAAAAGCCAAAGAAGCTGGAAACACCACTAGCAGC
AATGCTTCCTTCTAAGTACGCCAATGTTGATGTCACAGAATTGTTTCCAGACTTCAGACC
TGATAAAGTATTATTGTTTTCTCGTCTCTTTGGGCCGGGTAAGCTATCGAGCTTGCCACA
GATATGGCGCGGTGTTAAGAAACGTAGACGTCGCAAACGCAGTGGTAGTACCAGTAGTGA
CACTACTCCGCAATTACCAGATAACCAAGAACCGCAGTACGCCAGTGATGATGAGGAGAA
ACTTCTCAGACCGATGGAAGAATCACAGCATACGGCGTTTGATGACAAGATGTCTGGCCC
CGGTGACAAGTCACAGAGGCCAACACCAGCCCACTGGCGTTTCGGTCCGGCTCAAGTTTG
GTACGATATGTTAAATGTACCCGAAACTGGAGACGGATTCGATTATGGATTTAAGTTGAA
GGCTCCATCTTATGAAAATGAAGATGCACCGAAGGAATTAGAACGGGTCAAAACTGAAAT
AGAAGAAAATAGTGATAATTCTGAAAGTGATTTTCCAGATGATGCTTTTCTTATGGTATC
ACAGTTGCATTGGGAAGATGATGTGATATGGGATGGAAGTGAAATGAAACATAAGGTCCT
GGCTCGTCTAAACAGCAAGAGCAACGCAGCCGGTTGGGTGCCAACATCAGTCAGTCGTAC
TGCGCAGCAGTTCTCGCACCCGCGCCCTCAACCGACGACAACTTTACAACCAAAGCCTCC
CACAGCCACAGCAACATCCACAAACAGTCAGACAGGTCCCGGGCAACAAGAGAGTGATGG
TAACACATGGTATAGCATATTTCCTGTTGAAAATGAGGAGCTGGTGTATGGTACATGGGA
GGACGAAGTGATTTGGGATGCGGAGAATATGGGCAAAATACCCAAACCGAAGATATTGAC
TTTAGACCCTAATGATGAGAACATTATACTTGGCATACCTGATGACGTGGATCCATCAAA
GATTACCAGAGAGAGAGGTCCAACTCCGAAGGTTAAGATTCCACATCCTCATGTTAAGAA
GTCAAAGATACTACTGGGTAAAGCTGGTGTGATTAATGTTCTACAAGAGGATGCTCCGCC
ACCACCGCCTAAGTCCCCTGACAGAGATCCGTTTAATATATCCAATGATGTGTACTACCA
ACCGAAGTCGCAGAATCCACGTTTGAAAGTGGGAGGCGGTCAACTAATCCAGCATAGTAC
ACCTGTGGTGGAGTTACGTTCACCGTTCATCCAGACCCACATGGGTCCGGCGCGTCTACG
TGCTTTCCATCGGCCGGCGCTTAGGAAACATACTTACGGGCCCCTCGCTGCGCCTGGACC
ACATCCTGTACAACCGCTGTTGAAACATATCAAGAAGAAGGCTAAACAACGTGAGGCCGA
ACGTTTGGCGTCGGGTGGTGGTGACGTGTTCTTCATGCGAACACCCGAGGACTTGAGCGG
AAGGGATGGCGAACTCATACTGGTGGAGTTCTGTGAGGAACACCCCCCGCTCATCAGCCA
AGTCGGAATGTGCACCAAGATAAAGAATTACTACAAGCGCACAGCTACTAAGGATAATGG
ACCGAAACCATTAAAATATGGTGAGATCGCGTACGCGCACACTTCGCCTTTCCTCGGTAT
ATTGCCACCCGGTGCCACGCAACCCGTGGTCGAGAATAATATGTACCGAGCCCCGATATA
TGAACATACTATATCACAGACCGATTTCCTTGTTATCAGAACTAGACAAGCGTTTTATGT
ACGCGAAGTCGATGCGCTGTATGTAGCTGGTCAGGAGTGTCCATTGTATGAAGTGCCTGG
TCCGAATTCCAAAAGGGCGAATAATTTTGTTCGTGATTTCTTACAGGTTTTCATATATCG
ATTGTTCTGGAAATCACGAGACAGACCGAGACGTATCAAGATGGATGATATAAAGAAAGC
GTTCCCTTCGCATTCCGAAAGTTCAATAAGAAAACGACTCAAGCTCTGTGCGGACTTTAA
ACGTACTGGATTGGATTCCAATTGGTGGGTCATAAAACCAGAATTTCGTTTACCGTCTGA
GGAGGAGATACGAGCGATGGTATCGCCCGAGCAATGCTGTTCGTACTTCAGTATGGCCGC
CGCCGAGCAAAGATTAAAAGATGCCGGTTATGGAGAAAAGTTTATTTTCACACCGCAGGA
AGACGACGATGAAGAAATGCAGTTAAAAATGGACGACGAGGTTAAAGTGGCACCGTGGAA
CACCACCCGAGCGTACATCCAAGCGATGCGCGGCAAATGTTTGCTCCAACTAATCGGGCC
GGCTGACCCAACGGGTTGCGGGGAGGGTTTCTCGTACGTACGCGTGCCGAACAAACCGAC
GCAACAGCCGAACGACGAGCAACAGCCGAAACGGACCGTCACCGGTACCGACGCCGACTT
GAGGCGGCTGAGCTTGAACAACGCGAAGGCTCTATTAAGAAAGTTCGGTGTACCCGAGGA
AGAGATAAAAAAATTATCAAGATGGGAAGTTATTGATGTCGTACGGACATTATCTACTGA
GAAAGCGAAAGCTGGTGAAGAAGGCATGACAAAGTTTTCTAGAGGCAACAGGTTCTCTAT
AGCTGAACATCAAGAAAGATATAAAGAAGAATGTCAACGTATATTCGAGTTGCAAAACCG
TGTACTTCAAAGCACAGAAGTGCTGAGTACGGACGAAGCTGAAAGCTCAGTCAGTGAAGA
GTCAGACTTAGAAGAGATGGGGAAGAATCTAGAAAATATGTTAGCGAATAAAAAGACTAC
AGAACAGTTATCATTAGAAAGAGAGGAGGCAGAGAGAGCTGAACTGAGAAAAATGATAAT
GGGACAGTCTGAGAAAAAACCACAAATCAATCAAACCGACCAACAGCAGTCATCTCATCA
AGGTCGCGTATTACGAATAGTGCGTACGTTCCGTAACGCGACCGGTCAGCGGTACACGCG
CGTCGAACTAGTCCGTAAGGCGGCCGTAATCGAGGCCTACACTAAGATACGTTCTACCAA
GGACGACATATTCATACGGCAGTTCGCATCCATGGACGAGACGCAGAAGGAAGAAATGAA
GAGGGAGAAGAGAAGAATTCAGGAACAACTGAGAAGAATAAAGAGGAATCAAGAGAGGGA
AAGACTGGCTGGAAACGTCACAGTACCAGGACCTAGTATTTCTGATAACTCGAGCATGAC
GTCATCGACGATGGATTTATCTTTGCCATCCCAGGGTTTGATACCGTTAGGTCAGATTAA
ACAGGAACCGGATCTCCTCCACACGACGTCGCGACGACGAGCTAAGCTGAAGCCCGATTT
GAAGTTAAAGTGCGGTGCGTGCGGTCAAGTGGGTCATATGCGTACAAACAAGGCGTGTCC
CCTGTATACCGGTTCTATGGCTGGAGGACCTTCTTCTCCACTTGATACGGATGCTGAACC
ACCTTCCATAGAACCTGAAGACGACGACCTGGGCTACGTCGACGGTACTAAACTCACTTT
ACCTTCGAAGATTATTAAGCAATCCGCGGAAGAGTTAAGCCGTCGGAGCGGGTCGCGGCG
TAGCGAGGTACGCGCGTTAGGTCGTACTAAACGACGCGGTACCGGCGCTGACCCCTGCGA
GTACTTAGTACGGCGACCCGCCGAGCGCCGGCGTACCGACCCTCTCGTCACTCTCTCCTC
CTTACTGGAGGGCGTCCTCAAACACATGCGCCATCTGCCCGACGTGCAACCGTTCTTCTT
TCCCGTCAACCCTAAGTTGGTCGCGGATTACTATCGCATCGTATCTCGACCTATGGATTT
GCAAACCATCAGGGATAATTTACGGCAGAAGCACTATCAGAGCCGGGAAGATTTCCTTGC
GGACGTAAACCAGATTGTTGAGAATAGCACTCTTTATAATGGACCGACGAGTAGTCTGAC
TGTTGCCGCGCAGCGAATGTTGCAGCGTTGTGTTGAAAAGTTGGCCGAAAAGGAAGAACA
ACTCATGAAACTGGAGAAACTGATAAATCCCTTGTTGGATGATAATGATCAGGTTGCGCT
TTCATTTATACTCGAGAACTTGTTGACTACAAAACTCAAAATTATGCCGGAAGCTTGGCC
ATTTTTGAAACCTGTAAATAAGAAGCAAGTTAAGGACTATTATAATGTGATAAAGAGACC
TATAGACATGGAAACTATGGGAAAGAAAATACAAGCTCACAAGTACCACAGCCGGAATGA
GTTCCTACAGGATATTCAGCTGTTGGTAGACAACTGTCGGGCATATAACGGTCCGTCTTC
ACAGTTTACTAGACAGGCTGAGGCTATATTGAAAGTTACTCAGGACGCATTGGAACAGTT
CGAGGAGCATGTGAGTCAGTTGGAGGCGAACATTGCGCGCGTGCAACAGAAGATGCTAGA
AGACGCTGAACAGTCCGAAGTGGAGGGAGAAGACGGTTCCTCACAGCAGTCGGACGAGAA
GAGAGGGCGCGGGAGACCCAGAAAACACAAACCCTCAACCTCCACCTCCGCACTTGATGG
AGCAACGCCGAGAAAGCGCGGACGTCCACGGAAAGATCAGAATAGTTTGGAAGAAGATCT
TCAGTATTCTGATAGCGGTAGTTCTGAACTGGAGGAAGTGGAACAGAAAGACGTCGCCGA
GGCAATGGTGCAACTGTCTGTACGGCCGGAGGACGATTTGCCTGGAGGCGAGACCAGCCT
TGGTTTCGATACGTCTGAATTCTTGATAAAACGGGAAATCCCCGACGAACCGCCGCATTC
GGCGGACGGTTACGTCGACTTGGACCAACATAACGATTACACATTCCCGCCTGTTGTTAA
GGAGGAACCGGTTGAACCGGATATGAACATGGAACCGGGAATGATGATGGAGGGAAGCTC
AATGGAACCGCCACCACAATTCAAAGAGGAACCGCCAGAGAACTGGCAGCCCGATCCGGC
TATACAAGACGACTTGCAAGTGACGGACAGCGAAGAAGAAGCCGAAGATGGCTTATGGTT
CTAAGATAATTATCATTTTAAAGAATACATAAATAATAATAAATGATTCGTTTATTTATA
TTCAATCGTTT
(5831 bp)

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