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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29072_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_7-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008022 F protein C-terminus binding
GO:0008134 F transcription factor binding
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016032 P viral process
GO:0016579 P protein deubiquitination
GO:0016604 C nuclear body
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0050821 P protein stabilization
GO:0051090 P regulation of DNA-binding transcription factor activity
GO:1904353 P regulation of telomere capping
Transcript
Level		FPKM:1.47 TPM:1.48
ORF EntryO_SariMG10634_complete:A_SariMG_comp29072_c0_seq2
Sequence
(Nucleotide)
ATTGTTCCAGCGTATTATATATATTTATATATTTCAAATACTTACAAGATAATAATACAC
GACAAAAAGCAAAATGATAATCTCGAAATTAACGACTGCCGATTCAAATTAAAAGAAGCA
TATTTTCATTGACAATAATAAATTTAAACGTAGTACTATTATTATTGCTGATTAATATAA
ATTAATGGATATTAACAACTTTCTATACATTTTTCAATACAAGTTTCCAATGAAAATACA
CCACTAATCAACTGATTAATTTGTGTGTGTGTGTGTGTAGTTACTATCGCACATTTTTTT
CCCGTATTTTTGAAAAAAAAAAAAACAAACAAGTAAACACGGTTTTATTTTTCCCGTTTA
AGTATATCGCCCCTCGCGCCGACCGGGTGTTTGTTACCGTCAAGCGGACCAGGGCGCGTA
GGTTATGGCTCAGTTGTATATCTTGATCGCTTTCTCTAAGTAGTTGACGCGCGTGCGCTT
CGGCGTCTTGTTAATGTGTTCCAGCCCGAGCCAGGGTCGGCCGGACGCGTCTGGAAGGGA
CAGATTTGCGGTACTACTTGGCCTGAAATCGGTAATATTTACTATCGCGCCTTCACTTAT
GTAATTAGGTCTGCTATTTGTGACAATAGCGAAATTGTACTTTTCCCACTCCTTATCCGG
TATATCTAGTTTCTTCTGGAGCCTGTCCCTTACCGTTTGGAAAGGCTCGTTGTGTTTGAT
ACGCACGTAAAACGGTATACCGAATGTCGCATATACTTGCTTTTGGAAATGCGCACACGG
CACTAACACTTCATCCTCTTGTAAGTGTAACTCGTCTCTTGGTATCTCCTCTATTCTGTA
TAGTTTTGGTGGTGATATCGTCACCTGGTCGAGCGTCAATTCCGGATCCGGACCCGGTAA
TAATTTGTGACAAGAAACCTCCACGATTCGTAACCTGCCAGATCCTTCTGGAGACATTTC
CACGACCTTAGCTGCTTCTTCCAGTATGTCAGCAACTTTACCACCTTTATTTGGATATAA
AATTAATTCCTTATCTTCTTTGTAATTTGGACCCACCCATAAACATTTAAACTGTTTCTT
GTTATCCAATTCGTTAACTTTAATAGATAATATCTGGTAGAACAATTTCTTAGGGCACTT
TGGCTTACAGTACACTAACAAATCCTTAAGTATACCATCGTAAGAGTATCTCAGTGGGAG
TCCTGGGGTGTCCTTGTAATTTTGACACTTGAAGAACTGTATTAAGTACGGGTCGACGTT
GAGTCTATGTCCGACCGCTCGAGCCATTTGATCGTAACGCATTTGCATCGATAACTCCAT
TGTGAATCCGGGATCATTCGGTACGGTCTTATCGACGAACTGGACCTCGACCTTGTAGAA
TATGTACTTGAAGTAGTCCTGGCATGTCGGCAGCTCGAGGTCCTCGTGCCGGTGGTCTGC
GCGCTCGAAAACGATGATGTCGCCGTCCATCAGCTTTTCAAGGGGTTCGTTGTAGTTGTT
GACTTTCTCCACAAAATCTGGTTTTATTTCTTCGTACAAGATGAGCGGTGTGTTTGAGGG
GAAGCCAGCGCGTTTGTTCAGTATCGGTATGAGATCGGCCGGTTTACTCGCTATAGGCAG
GTAATGGTGACCGCAGTAATGTATCCGCTTCTGTTTCGGATCGTAGTATTTGAAGAACAG
TACGACATCGTTCTCCTTGTCGAATGTAGGCAGCGCCGCGAGACCAGAGTCCGGTGGCAA
CAGCTCCAGGAATATGTTCCAAGGGTTCGTGTTCTCTGATATATCGGCGATGATTTTATG
TTGATCGTTGACGATGTCCAAACAAGTCGGCCTGCAAGTCTGATTAGAGCGGGCACTGAA
TGGCCAAGGCCGTATTTGTTTCAGGGGGTACTTGAAGTTCTCAGCGAGCATCTCCATAAG
CTCGGCCACCGTCGCTTGCTTCCGGACGCGGAACACTCTGAAGTGGGCTCGTTCCGGATC
ATACAAGTCGTTGCCCTGGTGTCCGTCGAACGCTTCCTCCAAAACGACATTCACGTTCAT
ATACAAATGGGCCTCGTTACGCTCTTTACGACGAATAGTTTCAATTCTCTTTTCTTCAGC
CAATCGCTCGCTTAATTCGGTTGGTATGTCCGCCTGTGTGACCTCTTGCAGAACAGTCTT
CAACTGTGAATCTCTAATATAAACAAGCATGTAGGCGTTGGTGCAATGGCGCACGGTCAA
CGCCATGTCCTCGTCGTGACCGCCGTAGTTGTACTCGATGGCCTCCTGCTTAGTGCATCG
GGACACCACGTCGTCGTCGAACTTGCACCACTTCCCATCACCTCTAGGATTAATAAACAC
AACGTAATGTCCTCCATGATTGTCACCGGAATGCACAAGTACGGCGTGCAGCGTATAGTC
TGCTGGAGTCTCGGGCTTCTCTTGTAGATACGCGTCCAAGTTAATATGTTCGTAGAATTC
AAACCTGTCATTGAATTTCACAGAACTATCCGTAATCGGGTCATATTGAAACCGCATCAA
GTGTAGATGCAGAACCGGTGGGAACGATGCAAATATCACTCCCTTCTCTGCCTCTTGAAG
ACCGTGTTCACCCGCATCGTACTTATTCTCACCGTCTAGTGTTTCTGTACTTATGTAGTC
TTTGAACGATTCATCAATGTTTTTCTTTCCCTTTATATTTAGCTGGATATCGTAAAACGT
TTCCACGCGCGTACTCGATACGTTGACATTCTTGCACTTAATGTATGACGTCATTTTCCC
CTCAAACAGCCGCGGCACCGTACCCTCCACACATGTCCCTTTCATTTTACTTTCCAATTT
ATCAAGGAGCACCCTTAGGAATTCTTGTACGTCGTGCTGCATAAAAGAATCAAGCGTCTC
CCAGCCGAAGCTTTTAGTCAATTTCTTAGTCCCAACGGGTTTATCAGAAAATTGGAGTTC
ATAGAACACTCTTTGTAGTGCTAGTGCCACAGATCTAGTGCTATCATCAGATTCTGTGGG
CATCTTGTACACCGCTTTACGCAATTGATTTGTGAAATATAGCGTTTGTAACAATGAATT
CATATAACAAGTTGCACCTTGATTCTTCAGACCAACATATCCGGTGTGTTTTTTAGAATC
CCATGACACGCCGTGTGGGGCTTCAGCTGTGACATGCACCTCAAGGATAATCGAGTCGTC
TTTTATGAAACCTTTCTCAGGATCCGACACGTCGTTCCACGCCATGAAGTGGGAGAAACC
CCAATCGTTCTCTTTGCTGTAGAATAAATGCTGAATCTTCCTGAAAAAAGGTTCTACATC
GGGCTTCTGTGGAATAAGCCTTAACTCTGCCATGGCATAACAAGACCAGCTGGATGATTC
GCTTTCGCCATTACACTGAAGGAAAAATCCCAACGACTTCTGCTGTTGTCTGTCGGGAGA
TGGTGCCTGACGGGGCATCGCCATGATCTTCCAGGGTAAATTACGAACGTAGCATGGTGG
CGAGAGTACAGAGTCCTTCATGCTCCTGAAATTAGGAACCGTAAAACGGAACGTCGCTTC
GGAACGCGCCTCATCATCTTCCATTTCTACATCGAGACAGGCCAACGGCATTTCTGAAGA
TGTCGTCTCTTGAGTCTTCATAACATCACTCATGACAACTTCACCGTTGGATCCCTTTAT
TAGATCATCGTCCCAAGTCTTGTCTGTAACTGTGTATACAGTTTCCACGTCTTGTGTTTC
CATCTCTTCAACTTGGTCCACATTGGAGTCGTGCTGCTGCCTGTCCGGGGCAGGCGTGTG
ATTCATGTTAGCCGGGCGCGCCACGGGGGACTCTCGCCCACAACTCTTCGAAATTTCCTT
TAAAGCCAGGGGCTTGCTTCCTTTACACTTGCCGAAAATCCGTTGAACGAATTTCAGCGA
ACCTTTCTCATCGACTCGATTACCCTGCGTGTTAGGGATTTTGTTCTTCTTTAACAATAG
GGAATTAATTTTTGACGGGTGTTTACTGGCGGTGCAGCCGATGTCTGCAATTTTCAACAC
AAGGGACCGACAGTCGACAGGTACGCTAATAGCACATTCCTAATCTTATAATCATTGCCA
GAATTGCCGTGTCACTTTGTTGTTTGTGGAAAGAAGACGAATAATCACTGTATCTAGGTA
ATAAGTTATTTTCGCAAAAATAAACAAAATGGTGGATGATAATTTTAATTTCGGACTAAG
ATGTGTGGCCCGGTTTGATCGACGAATAATCACTGTATCTAGGTAATAAGTTATTTTCGC
AAAAATAAACAAAATGGTGGATGATAATTTTAATTTCGGACTAAGATGTGTGGCCCGGTT
TGATC
(4325 bp)

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