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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29018_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:0.31 TPM:0.31
ORF EntryO_SariMG10496_internal:A_SariMG_comp29018_c1_seq4
Sequence
(Nucleotide)
TTACCGTTTTATTACCGCTTTTGTCCTCCATCATACTCATTATAATTGATGATTTCGGTT
GCCTCTGAGGGGCGAGGCGCGGGGCGAGCTTGCCGCCGACCGTTAGGGCCGGCGCTGATG
AGTTTTTCTGTAACGCTGGTAAGTTATCCGGTTGTGGTTGTAATCTACTTTCAGGTGGAT
TTGATCCATCGTTACTAATAATACTTCCATCCTGAGTCCTCTGTTGCGTACAGACGGCAA
AGTGTTGTGACCAGTGCGCCCTCTGGCATGGGTAATCGCAATACGAAGTGTTCCAGCAAC
AATAGAACTGCGCCTCTTGACTACAGTTCGCGCACCATTGTTTAGACTTAGCGAGTTTTA
CGGCCGCTTCGAGTTCGGACTGCGCGTTTCGTCTCGCTTCGTTCACAGCTCGTACCTTCT
CTTTCTCGAACGATGTACGCATTTCAGTCAATACCAACTCATGATTATGCTGAATCTCTT
CGAGCTGTTGCTGGTTCTTCCACTTTAACTGTTCAAGTTGCAACCTCATCGAAGCCGCTT
GTGATGTCGGATCGTCCAGTTTATCCAACGAGTCTTCCAGTAACGTACGGAAGAAATCTG
CCAATTTAACAGCGTTCTGATTGAGTTTAGCGGTGAGTGGTCCGGCTGCAGAGGGCGGAG
GGACAGTGCCGCTGGGCACGTTGACGTCCAGAGGGTTTAGGATTGTCGGCCGTTGCTGAA
GTCTTGGTGGGTCTCCAGGAGTCGGCACGTCATTGTTGGGCTTATTCGCAGTGGAAGGTA
GAGACTGCCCAGCAGAATGGCTGCGATCCGATATTCCATTAATCGCGGGACTAGAAGACG
TTGTACTGTCAACTCCGCCCACTGACATCACCGGCTGTAAGCTGAACATCCACTGCCCGT
TGACGGAGGTCATCAGCGGGACCGTGTGGACCGCTGTGGGCACTTGCCCAATGGTAGGCA
CTTGCCCAATTGTGGGCACTTGCCCAATAGTGGACACTTGCTCAATAGTGGGCACGCTCT
GCACAGCCGCTGGTACTGACGTCGCCGTCGTAATACTGGACGGTGTTCCGGATAAAGACG
TTATCATAGGCACCAGGGGAGTCGTTACGGTGTTTACAACGTTGTTTGCAGTAGTAGTGA
TGACGGTAGTTCGTGTTGCTATTGCGTTTACAACTGGGCCGTTAGTGTTGGCCGGTTTCG
TGAACCGCACCGGCGCCTGCGTCATCGGCGGCTGGATAGGGATGTACACCATAGAGTTTT
TGCCATTCAGCTGGCCGTCCTCGGGTTTCTTCGGCTGGGGGAAAGTCTTCTTCGCTCTGG
GACGGATTTCGGCCTGCTTCGTCGGTGTCCATCGATTCAGTGGTGTAACTACAACCTTAT
TGACCCGCACCTCACGTAAACTGGACGACGGGTTCACCGGGCGCAGTTTGAACGCGTTCA
TCAGGTCCATCTTCTCCATATGACGCTCCGGTTCGTCCAGGTCTATCGATTCCGCTTTGA
TCTCGACTTGCATGTTCTCGTTGGGCTGTTTCTCCGGTGACGTCATACGAGCGAACGCTC
TCACCCCCACCCTACCCACCATCGGTTCGTTCTCGTTCCTCAACCTTTGCAATTTATTAG
CGTTATCTTTGACATTAACAATATCCTCACTGCTGCCCGTAGTCGGTGTGAATATACTAG
AATCCGGATCCACTTCGATCGTAACTTCCACTGTCTTCGGTACTTCTGTATGCGGAGTGT
TCGTTTGATTTGATGTCTTCGTTTTCGATAGACTAATAACGCTACTGATCGTAGGCAGTC
CGCTAATATTGTTATTCGTTGTGGAATTTTTAGTCGATCCACGTGCTAACACCGCTAATG
ATGTATTATCATCATATATAAAACAATCCTTGTCTATTTTCGAAGAATTTTTAATAACGC
TGCAATGTACCGAAGCAGTTTCCCTGTTATTATTACCAGATTTTCCATTATCACTAGTTT
TACATCTGACCGAATTCTCTTTCGGTTTGTCCTTACTGTTATTGGATGTTGGTTCATCGG
ATTTTTCAGATTTTACAGAGTTATTACTAAGGGATCTGTTGCTTTTACTGCGTCTTCTCT
CAGACTTTGGAGTTTCATCTTTATTTTTCTCACTTAGAGATTTATCTCTTTTCGATTTCT
GTCTCTGCAATAATTGTTTTTCCTCTTTTTGCATAATTTGTATATGTTTTGTTTTATCAT
CATCAGCCGTTGATGATTTGGGGCTACCTTTAGTATCGGTTTTGATAATGTGTTTATTTA
ATTTAGTCTGTATCGTTATTTTCGTTGGGGTTTTTGGTTTTCCTGTTTTATCTTTAGTGT
GAATCGTCTTATCCTTCACCGCAGAACTGCTGGACGGTTCATCGTCTTTTACTGTTACTA
TTTGGTGAACGGTTTTGACGTTTTCTTGCACATCTTTAGGATTTTCCGTGACAATTTCAC
AATCTTTTTGGCCATCTTTACTGCTGCTAGGTTCTTGACAGACCGCGTTGTTATCTTCTA
TTTGATTGTCTTTCACTCGTTTACGTTTTTCAGTTCTTCCGCTATCTAATATCGTGATAA
CGGCCTCTTCAAGGTCCGACCGACGTCGTTTTCTTATTGTTGTAGAAGTTCTAATATCCC
GTTTGACATCTTCGATGTTGATTATTTCAACGTTCATAGATCTGTCTTTGTCCACTGCAG
CTATAGAATCGTCATCTTTTGTTAAATTAACATCATTATCCACTCCATTATTAGGTGATA
GCCTCAAAGGATCTTCCATTTCACTGATATCACAATCGTTGAAACTCTTCGATCTTTTTG
AGGACCTTCTGATCTTGTTCTTGCCCAAATTGGGTGATGAATTCAATGATTTATTACTAA
CAGGCGTACGCACTTCACCTTCGAATGATGGTATCATCATTTTAAGTTGTTCGTTTAGTT
TTGTCGGATCAAACTGTGTCTTGAACGGCGGGTAAACAAATTTTCCATACTTTTTCGATA
CATTCCTTATGTGCTGTTCTGCTTCCTGCATACTGTCCAATAGATCCTGACGTTTTGTCC
TAAAATTATTAGGATCTTTCTCTGAATATAGGAAGCAGTCCTTAGCCGGTACCCAGGCTC
GGTCGTGGGCACCGAAGAATCTAACATCCACCAGTCCTGCTTGACTAACCGACATGCCCT
TGGCAGGCCAATATGGAAAACCTTTAAGCTTAGCCCAAAGCAGTATATGTGGTGTGGAGC
AGACATCAGTGAACCAGGTCGGTCTGCGGGCGTGCGCCGCCGCGTAACACTCCGGGCACG
CTTCTATCTCGCCCATCTCAGCGCGACACGATCTGACCAACGCACGAGCCCCGCTTGTCA
GTTTAGATTGTAATGTGTTGAATATAATACTATTGTGTAGTATCCATTGCGCGTCTGCTG
CGAAAGCCTCCGTGCTACCATATAGCCCGTTAGCGATGTTTGACTTCATCAGCGATAAAT
CCATAGGACGAATAATGTACTTCGCGTAATCAGGAAACACTTCCCGATCTACTCTGTTTA
CAAACGGTTCCACCCCGTTAATTTCCATCATTCGCTCCAATGCAAATTTCAATAAGTCAC
AGAGCATACCCAGCGAGATCTTTTTCATGGCTGGGGATCTGGTTTCTGAACTTTCTGCAT
GCAATATATTCATACAGTCAGGGCAAACCCAACATTTTTCATTATTTGTTTTGTTGCGTT
CTGCACTAGATAGACATTTAAAATGGAATGATCGTGGGCAGACTGTACAAAACAAGGGGG
TGTGTGCCTTCTCACTAGATTGTTCAACAGCCCAATGACATCTCCAGCAGTATGGGTCAC
TATGTAGCTTCCCAGCAGTTCCTATATTAATCTCCTCAAGTTTTCTTTTTTTAGGTGTAC
TGCTTGAGACTGGTACTACAGACTCTTCCCTTACATGATTCTTACTATCATCAAGATCAT
CATCTGTTATATCTTCATCTTTTTGAGATTTTCCCGTGACTGAATTCAAGAATTGTTTCA
CTTTACTTACAAACTCAGGGTTCTGTGACCTCATTGATCTCTTTAAAACATTGCTATCAG
ATTTCTCACTGCAATTGCTCTTTTGTGATACATTACTGTTTCTTCTAGTTCCTTGTATCT
TGTCTGCTTCGACTGATGAGTTCAAACTTACATTAGAGCTATCTAATACTGTTCTTGGCT
TCCTCATTTTAGTAGTGAGCTGTGTACATTCACTTATAATTTTAGATTCCTTTGCAGAGT
TTATTAAGGATTTTAATTCTCTACTTATACTTTTACTGTGCTCCTTTTCAGAATTTTCTG
AAATTGATTCAATGTCTACTGAAGTTTGCCTCTCAATTGTAATATCTATTGGAATTACTG
TATTGTTACTATTATGTTTTTTCTGTTCTTTTGTTTGATTTTCATTTGTTTTATTTTTTT
CTGTTGCTGACATCTG
(4456 bp)

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