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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29018_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:0.99 TPM:1.00
ORF EntryO_SariMG10493_5prime_partial:A_SariMG_comp29018_c1_seq3
Sequence
(Nucleotide)
TTCCACTTTGCCAAAAATGAGTTGTATTGTAGATAGCCAGTTTGATTCTATTCGACTCAT
ATGTATGTGTGTGTTGCTAGTTACAATACCGACTTATAATTGATGATTTCGGTTGCCTCT
GAGGGGCGAGGCGCGGGGCGAGCTTGCCGCCGACCGTTAGGGCCGGCGCTGATGAGTTTT
TCTGTAACGCTGGTAAGTTATCCGGTTGTGGTTGTAATCTACTTTCAGGTGGATTTGATC
CATCGTTACTAATAATACTTCCATCCTGAGTCCTCTGTTGCGTACAGACGGCAAAGTGTT
GTGACCAGTGCGCCCTCTGGCATGGGTAATCGCAATACGAAGTGTTCCAGCAACAATAGA
ACTGCGCCTCTTGACTACAGTTCGCGCACCATTGTTTAGACTTAGCGAGTTTTACGGCCG
CTTCGAGTTCGGACTGCGCGTTTCGTCTCGCTTCGTTCACAGCTCGTACCTTCTCTTTCT
CGAACGATGTACGCATTTCAGTCAATACCAACTCATGATTATGCTGAATCTCTTCGAGCT
GTTGCTGGTTCTTCCACTTTAACTGTTCAAGTTGCAACCTCATCGAAGCCGCTTGTGATG
TCGGATCGTCCAGTTTATCCAACGAGTCTTCCAGTAACGTACGGAAGAAATCTGCCAATT
TAACAGCGTTCTGATTGAGTTTAGCGGTGAGTGGTCCGGCTGCAGAGGGCGGAGGGACAG
TGCCGCTGGGCACGTTGACGTCCAGAGGGTTTAGGATTGTCGGCCGTTGCTGAAGTCTTG
GTGGGTCTCCAGGAGTCGGCACGTCATTGTTGGGCTTATTCGCAGTGGAAGGTAGAGACT
GCCCAGCAGAATGGCTGCGATCCGATATTCCATTAATCGCGGGACTAGAAGACGTTGTAC
TGTCAACTCCGCCCACTGACATCACCGGCTGTAAGCTGAACATCCACTGCCCGTTGACGG
AGGTCATCAGCGGGACCGTGTGGACCGCTGTGGGCACTTGCCCAATGGTAGGCACTTGCC
CAATTGTGGGCACTTGCCCAATAGTGGACACTTGCTCAATAGTGGGCACGCTCTGCACAG
CCGCTGGTACTGACGTCGCCGTCGTAATACTGGACGGTGTTCCGGATAAAGACGTTATCA
TAGGCACCAGGGGAGTCGTTACGGTGTTTACAACGTTGTTTGCAGTAGTAGTGATGACGG
TAGTTCGTGTTGCTATTGCGTTTACAACTGGGCCGTTAGTGTTGGCCGGTTTCGTGAACC
GCACCGGCGCCTGCGTCATCGGCGGCTGGATAGGGATGTACACCATAGAGTTTTTGCCAT
TCAGCTGGCCGTCCTCGGGTTTCTTCGGCTGGGGGAAAGTCTTCTTCGCTCTGGGACGGA
TTTCGGCCTGCTTCGTCGGTGTCCATCGATTCAGTGGTGTAACTACAACCTCACGTAAAC
TGGACGACGGGTTCACCGGGCGCAGTTTGAACGCGTTCATCAGGTCCATCTTCTCCATAT
GACGCTCCGGTTCGTCCAGGTCTATCGATTCCGCTTTGATCTCGACTTGCATGTTCTCGT
TGGGCTGTTTCTCCGGTGACGTCATACGAGCGAACGCTCTCACCCCCACCCTACCCACCA
TCGGTTCGTTCTCGTTCCTCAACCTTTGCAATTTATTAGCGTTATCTTTGACATTAACAA
TATCCTCACTGCTGCCCGTAGTCGGTGTGAATATACTAGAATCCGGATCCACTTCGATCG
TAACTTCCACTGTCTTCGGTACTTCTGTATGCGGAGTGTTCGTTTGATTTGATGTCTTCG
TTTTCGATAGACTAATAACGCTACTGATCGTAGGCAGTCCGCTAATATTGTTATTCGTTG
TGGAATTTTTAGTCGATCCACGTGCTAACACCGCTAATGATGTATTATCATCATATATAA
AACAATCCTTGTCTATTTTCGAAGAATTTTTAATAACGCTGCAATGTACCGAAGCAGTTT
CCCTGTTATTATTACCAGATTTTCCATTATCACTAGTTTTACATCTGACCGAATTCTCTT
TCGGTTTGTCCTTACTGTTATTGGATGTTGGTTCATCGGATTTTTCAGATTTTACAGAGT
TATTACTAAGGGATCTGTTGCTTTTACTGCGTCTTCTCTCAGACTTTGGAGTTTCATCTT
TATTTTTCTCACTTAGAGATTTATCTCTTTTCGATTTCTGTCTCTGCAATAATTGTTTTT
CCTCTTTTTGCATAATTTGTATATGTTTTGTTTTATCATCATCAGCCGTTGATGATTTGG
GGCTACCTTTAGTATCGGTTTTGATAATGTGTTTATTTAATTTAGTCTGTATCGTTATTT
TCGTTGGGGTTTTTGGTTTTCCTGTTTTATCTTTAGTGTGAATCGTCTTATCCTTCACCG
CAGAACTGCTGGACGGTTCATCGTCTTTTACTGTTACTATTTGGTGAACGGTTTTGACGT
TTTCTTGCACATCTTTAGGATTTTCCGTGACAATTTCACAATCTTTTTGGCCATCTTTAC
TGCTGCTAGGTTCTTGACAGACCGCGTTGTTATCTTCTATTTGATTGTCTTTCACTCGTT
TACGTTTTTCAGTTCTTCCGCTATCTAATATCGTGATAACGGCCTCTTCAAGGTCCGACC
GACGTCGTTTTCTTATTGTTGTAGAAGTTCTAATATCCCGTTTGACATCTTCGATGTTGA
TTATTTCAACGTTCATAGATCTGTCTTTGTCCACTGCAGCTATAGAATCGTCATCTTTTG
TTAAATTAACATCATTATCCACTCCATTATTAGGTGATAGCCTCAAAGGATCTTCCATTT
CACTGATATCACAATCGTTGAAACTCTTCGATCTTTTTGAGGACCTTCTGATCTTGTTCT
TGCCCAAATTGGGTGATGAATTCAATGATTTATTACTAACAGGCGTACGCACTTCACCTT
CGAATGATGGTATCATCATTTTAAGTTGTTCGTTTAGTTTTGTCGGATCAAACTGTGTCT
TGAACGGCGGGTAAACAAATTTTCCATACTTTTTCGATACATTCCTTATGTGCTGTTCTG
CTTCCTGCATACTGTCCAATAGATCCTGACGTTTTGTCCTAAAATTATTAGGATCTTTCT
CTGAATATAGGAAGCAGTCCTTAGCCGGTACCCAGGCTCGGTCGTGGGCACCGAAGAATC
TAACATCCACCAGTCCTGCTTGACTAACCGACATGCCCTTGGCAGGCCAATATGGAAAAC
CTTTAAGCTTAGCCCAAAGCAGTATATGTGGTGTGGAGCAGACATCAGTGAACCAGGTCG
GTCTGCGGGCGTGCGCCGCCGCGTAACACTCCGGGCACGCTTCTATCTCGCCCATCTCAG
CGCGACACGATCTGACCAACGCACGAGCCCCGCTTGTCAGTTTAGATTGTAATGTGTTGA
ATATAATACTATTGTGTAGTATCCATTGCGCGTCTGCTGCGAAAGCCTCCGTGCTACCAT
ATAGCCCGTTAGCGATGTTTGACTTCATCAGCGATAAATCCATAGGACGAATAATGTACT
TCGCGTAATCAGGAAACACTTCCCGATCTACTCTGTTTACAAACGGTTCCACCCCGTTAA
TTTCCATCATTCGCTCCAATGCAAATTTCAATAAGTCACAGAGCATACCCAGCGAGATCT
TTTTCATGGCTGGGGATCTGGTTTCTGAACTTTCTGCATGCAATATATTCATACAGTCAG
GGCAAACCCAACATTTTTCATTATTTGTTTTGTTGCGTTCTGCACTAGATAGACATTTAA
AATGGAATGATCGTGGGCAGACTGTACAAAACAAGGGGGTGTGTGCCTTCTCACTAGATT
GTTCAACAGCCCAATGACATCTCCAGCAGTATGGGTCACTATGTAGCTTCCCAGCAGTTC
CTATATTAATCTCCTCAAGTTTTCTTTTTTTAGGTGTACTGCTTGAGACTGGTACTACAG
ACTCTTCCCTTACATGATTCTTACTATCATCAAGATCATCATCTGTTATATCTTCATCTT
TTTGAGATTTTCCCGTGACTGAATTCAAGAATTGTTTCACTTTACTTACAAACTCAGGGT
TCTGTGACCTCATTGATCTCTTTAAAACATTGCTATCAGATTTCTCACTGCAATTGCTCT
TTTGTGATACATTACTGTTTCTTCTAGTTCCTTGTATCTTGTCTGCTTCGACTGATGAGT
TCAAACTTACATTAGAGCTATCTAATACTGTTCTTGGCTTCCTCATTTTAGTAGTGAGCT
GTGTACATTCACTTATAATTTTAGATTCCTTTGCAGAGTTTATTAAGGATTTTAATTCTC
TACTTATACTTTTACTGTGCTCCTTTTCAGAATTTTCTGAAATTGATTCAATGTCTACTG
AAGTTTGCCTCTCAATTGTAATATCTATTGGAATTACTGTATTGTTACTATTATGTTTTT
TCTGTTCTTTTGTTTGATTTTCATTTGTTTTATTTTTTTCTGTTGCTGACATCTG
(4495 bp)

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