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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29018_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:1.06 TPM:1.07
ORF EntryO_SariMG10490_5prime_partial:A_SariMG_comp29018_c1_seq2
Sequence
(Nucleotide)
TTCCACTTTGCCAAAAATGAGTTGTATTGTAGATAGCCAGTTTGATTCTATTCGACTCAT
ATGTATGTGTGTGTTGCTAGTTACAATACCGACTTATAATTGATGATTTCGGTTGCCTCT
GAGGGGCGAGGCGCGGGGCGAGCTTGCCGCCGACCGTTAGGGCCGGCGCTGATGAGTTTT
TCTGTAACGCTGGTAAGTTATCCGGTTGTGGTTGTAATCTACTTTCAGGTGGATTTGATC
CATCGTTACTAATAATACTTCCATCCTGAGTCCTCTGTTGCGTACAGACGGCAAAGTGTT
GTGACCAGTGCGCCCTCTGGCATGGGTAATCGCAATACGAAGTGTTCCAGCAACAATAGA
ACTGCGCCTCTTGACTACAGTTCGCGCACCATTGTTTAGACTTAGCGAGTTTTACGGCCG
CTTCGAGTTCGGACTGCGCGTTTCGTCTCGCTTCGTTCACAGCTCGTACCTTCTCTTTCT
CGAACGATGTACGCATTTCAGTCAATACCAACTCATGATTATGCTGAATCTCTTCGAGCT
GTTGCTGGTTCTTCCACTTTAACTGTTCAAGTTGCAACCTCATCGAAGCCGCTTGTGATG
TCGGATCGTCCAGTTTATCCAACGAGTCTTCCAGTAACGTACGGAAGAAATCTGCCAATT
TAACAGCGTTCTGATTGAGTTTAGCGGTGAGTGGTCCGGCTGCAGAGGGCGGAGGGACAG
TGCCGCTGGGCACGTTGACGTCCAGAGGGTTTAGGATTGTCGGCCGTTGCTGAAGTCTTG
GTGGGTCTCCAGGAGTCGGCACGTCATTGTTGGGCTTATTCGCAGTGGAAGGTAGAGACT
GCCCAGCAGAATGGCTGCGATCCGATATTCCATTAATCGCGGGACTAGAAGACGTTGTAC
TGTCAACTCCGCCCACTGACATCACCGGCTGTAAGCTGAACATCCACTGCCCGTTGACGG
AGGTCATCAGCGGGACCGTGTGGACCGCTGTGGGCACTTGCCCAATGGTAGGCACTTGCC
CAATTGTGGGCACTTGCCCAATAGTGGACACTTGCTCAATAGTGGGCACGCTCTGCACAG
CCGCTGGTACTGACGTCGCCGTCGTAATACTGGACGGTGTTCCGGATAAAGACGTTATCA
TAGGCACCAGGGGAGTCGTTACGGTGTTTACAACGTTGTTTGCAGTAGTAGTGATGACGG
TAGTTCGTGTTGCTATTGCGTTTACAACTGGGCCGTTAGTGTTGGCCGGTTTCGTGAACC
GCACCGGCGCCTGCGTCATCGGCGGCTGGATAGGGATGTACACCATAGAGTTTTTGCCAT
TCAGCTGGCCGTCCTCGGGTTTCTTCGGCTGGGGGAAAGTCTTCTTCGCTCTGGGACGGA
TTTCGGCCTGCTTCGTCGGTGTCCATCGATTCAGTGGTGTAACTACAACCTTATTGACCC
GCACCTCACGTAAACTGGACGACGGGTTCACCGGGCGCAGTTTGAACGCGTTCATCAGGT
CCATCTTCTCCATATGACGCTCCGGTTCGTCCAGGTCTATCGATTCCGCTTTGATCTCGA
CTTGCATGTTCTCGTTGGGCTGTTTCTCCGGTGACGTCATACGAGCGAACGCTCTCACCC
CCACCCTACCCACCATCGGTTCGTTCTCGTTCCTCAACCTTTGCAATTTATTAGCGTTAT
CTTTGACATTAACAATATCCTCACTGCTGCCCGTAGTCGGTGTGAATATACTAGAATCCG
GATCCACTTCGATCGTAACTTCCACTGTCTTCGGTACTTCTGTATGCGGAGTGTTCGTTT
GATTTGATGTCTTCGTTTTCGATAGACTAATAACGCTACTGATCGTAGGCAGTCCGCTAA
TATTGTTATTCGTTGTGGAATTTTTAGTCGATCCACGTGCTAACACCGCTAATGATGTAT
TATCATCATATATAAAACAATCCTTGTCTATTTTCGAAGAATTTTTAATAACGCTGCAAT
GTACCGAAGCAGTTTCCCTGTTATTATTACCAGATTTTCCATTATCACTAGTTTTACATC
TGACCGAATTCTCTTTCGGTTTGTCCTTACTGTTATTGGATGTTGGTTCATCGGATTTTT
CAGATTTTACAGAGTTATTACTAAGGGATCTGTTGCTTTTACTGCGTCTTCTCTCAGACT
TTGGAGTTTCATCTTTATTTTTCTCACTTAGAGATTTATCTCTTTTCGATTTCTGTCTCT
GCAATAATTGTTTTTCCTCTTTTTGCATAATTTGTATATGTTTTGTTTTATCATCATCAG
CCGTTGATGATTTGGGGCTACCTTTAGTATCGGTTTTGATAATGTGTTTATTTAATTTAG
TCTGTATCGTTATTTTCGTTGGGGTTTTTGGTTTTCCTGTTTTATCTTTAGTGTGAATCG
TCTTATCCTTCACCGCAGAACTGCTGGACGGTTCATCGTCTTTTACTGTTACTATTTGGT
GAACGGTTTTGACGTTTTCTTGCACATCTTTAGGATTTTCCGTGACAATTTCACAATCTT
TTTGGCCATCTTTACTGCTGCTAGGTTCTTGACAGACCGCGTTGTTATCTTCTATTTGAT
TGTCTTTCACTCGTTTACGTTTTTCAGTTCTTCCGCTATCTAATATCGTGATAACGGCCT
CTTCAAGGTCCGACCGACGTCGTTTTCTTATTGTTGTAGAAGTTCTAATATCCCGTTTGA
CATCTTCGATGTTGATTATTTCAACGTTCATAGATCTGTCTTTGTCCACTGCAGCTATAG
AATCGTCATCTTTTGTTAAATTAACATCATTATCCACTCCATTATTAGGTGATAGCCTCA
AAGGATCTTCCATTTCACTGATATCACAATCGTTGAAACTCTTCGATCTTTTTGAGGACC
TTCTGATCTTGTTCTTGCCCAAATTGGGTGATGAATTCAATGATTTATTACTAACAGGCG
TACGCACTTCACCTTCGAATGATGGTATCATCATTTTAAGTTGTTCGTTTAGTTTTGTCG
GATCAAACTGTGTCTTGAACGGCGGGTAAACAAATTTTCCATACTTTTTCGATACATTCC
TTATGTGCTGTTCTGCTTCCTGCATACTGTCCAATAGATCCTGACGTTTTGTCCTAAAAT
TATTAGGATCTTTCTCTGAATATAGGAAGCAGTCCTTAGCCGGTACCCAGGCTCGGTCGT
GGGCACCGAAGAATCTAACATCCACCAGTCCTGCTTGACTAACCGACATGCCCTTGGCAG
GCCAATATGGAAAACCTTTAAGCTTAGCCCAAAGCAGTATATGTGGTGTGGAGCAGACAT
CAGTGAACCAGGTCGGTCTGCGGGCGTGCGCCGCCGCGTAACACTCCGGGCACGCTTCTA
TCTCGCCCATCTCAGCGCGACACGATCTGACCAACGCACGAGCCCCGCTTGTCAGTTTAG
ATTGTAATGTGTTGAATATAATACTATTGTGTAGTATCCATTGCGCGTCTGCTGCGAAAG
CCTCCGTGCTACCATATAGCCCGTTAGCGATGTTTGACTTCATCAGCGATAAATCCATAG
GACGAATAATGTACTTCGCGTAATCAGGAAACACTTCCCGATCTACTCTGTTTACAAACG
GTTCCACCCCGTTAATTTCCATCATTCGCTCCAATGCAAATTTCAATAAGTCACAGAGCA
TACCCAGCGAGATCTTTTTCATGGCTGGGGATCTGGTTTCTGAACTTTCTGCATGCAATA
TATTCATACAGTCAGGGCAAACCCAACATTTTTCATTATTTGTTTTGTTGCGTTCTGCAC
TAGATAGACATTTAAAATGGAATGATCGTGGGCAGACTGTACAAAACAAGGGGGTGTGTG
CCTTCTCACTAGATTGTTCAACAGCCCAATGACATCTCCAGCAGTATGGGTCACTATGTA
GCTTCCCAGCAGTTCCTATATTAATCTCCTCAAGTTTTCTTTTTTTAGGTGTACTGCTTG
AGACTGGTACTACAGACTCTTCCCTTACATGATTCTTACTATCATCAAGATCATCATCTG
TTATATCTTCATCTTTTTGAGATTTTCCCGTGACTGAATTCAAGAATTGTTTCACTTTAC
TTACAAACTCAGGGTTCTGTGACCTCATTGATCTCTTTAAAACATTGCTATCAGATTTCT
CACTGCAATTGCTCTTTTGTGATACATTACTGTTTCTTCTAGTTCCTTGTATCTTGTCTG
CTTCGACTGATGAGTTCAAACTTACATTAGAGCTATCTAATACTGTTCTTGGCTTCCTCA
TTTTAGTAGTGAGCTGTGTACATTCACTTATAATTTTAGATTCCTTTGCAGAGTTTATTA
AGGATTTTAATTCTCTACTTATACTTTTACTGTGCTCCTTTTCAGAATTTTCTGAAATTG
ATTCAATGTCTACTGAAGTTTGCCTCTCAATTGTAATATCTATTGGAATTACTGTATTGT
TACTATTATGTTTTTTCTGTTCTTTTGTTTGATTTTCATTTGTTTTATTTTTTTCTGTTG
CTGACATCTG
(4510 bp)

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