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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp29018_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:0.29 TPM:0.29
ORF EntryO_SariMG10487_internal:A_SariMG_comp29018_c1_seq1
Sequence
(Nucleotide)
TTACCGTTTTATTACCGCTTTTGTCCTCCATCATACTCATTATAATTGATGATTTCGGTT
GCCTCTGAGGGGCGAGGCGCGGGGCGAGCTTGCCGCCGACCGTTAGGGCCGGCGCTGATG
AGTTTTTCTGTAACGCTGGTAAGTTATCCGGTTGTGGTTGTAATCTACTTTCAGGTGGAT
TTGATCCATCGTTACTAATAATACTTCCATCCTGAGTCCTCTGTTGCGTACAGACGGCAA
AGTGTTGTGACCAGTGCGCCCTCTGGCATGGGTAATCGCAATACGAAGTGTTCCAGCAAC
AATAGAACTGCGCCTCTTGACTACAGTTCGCGCACCATTGTTTAGACTTAGCGAGTTTTA
CGGCCGCTTCGAGTTCGGACTGCGCGTTTCGTCTCGCTTCGTTCACAGCTCGTACCTTCT
CTTTCTCGAACGATGTACGCATTTCAGTCAATACCAACTCATGATTATGCTGAATCTCTT
CGAGCTGTTGCTGGTTCTTCCACTTTAACTGTTCAAGTTGCAACCTCATCGAAGCCGCTT
GTGATGTCGGATCGTCCAGTTTATCCAACGAGTCTTCCAGTAACGTACGGAAGAAATCTG
CCAATTTAACAGCGTTCTGATTGAGTTTAGCGGTGAGTGGTCCGGCTGCAGAGGGCGGAG
GGACAGTGCCGCTGGGCACGTTGACGTCCAGAGGGTTTAGGATTGTCGGCCGTTGCTGAA
GTCTTGGTGGGTCTCCAGGAGTCGGCACGTCATTGTTGGGCTTATTCGCAGTGGAAGGTA
GAGACTGCCCAGCAGAATGGCTGCGATCCGATATTCCATTAATCGCGGGACTAGAAGACG
TTGTACTGTCAACTCCGCCCACTGACATCACCGGCTGTAAGCTGAACATCCACTGCCCGT
TGACGGAGGTCATCAGCGGGACCGTGTGGACCGCTGTGGGCACTTGCCCAATGGTAGGCA
CTTGCCCAATTGTGGGCACTTGCCCAATAGTGGACACTTGCTCAATAGTGGGCACGCTCT
GCACAGCCGCTGGTACTGACGTCGCCGTCGTAATACTGGACGGTGTTCCGGATAAAGACG
TTATCATAGGCACCAGGGGAGTCGTTACGGTGTTTACAACGTTGTTTGCAGTAGTAGTGA
TGACGGTAGTTCGTGTTGCTATTGCGTTTACAACTGGGCCGTTAGTGTTGGCCGGTTTCG
TGAACCGCACCGGCGCCTGCGTCATCGGCGGCTGGATAGGGATGTACACCATAGAGTTTT
TGCCATTCAGCTGGCCGTCCTCGGGTTTCTTCGGCTGGGGGAAAGTCTTCTTCGCTCTGG
GACGGATTTCGGCCTGCTTCGTCGGTGTCCATCGATTCAGTGGTGTAACTACAACCTCAC
GTAAACTGGACGACGGGTTCACCGGGCGCAGTTTGAACGCGTTCATCAGGTCCATCTTCT
CCATATGACGCTCCGGTTCGTCCAGGTCTATCGATTCCGCTTTGATCTCGACTTGCATGT
TCTCGTTGGGCTGTTTCTCCGGTGACGTCATACGAGCGAACGCTCTCACCCCCACCCTAC
CCACCATCGGTTCGTTCTCGTTCCTCAACCTTTGCAATTTATTAGCGTTATCTTTGACAT
TAACAATATCCTCACTGCTGCCCGTAGTCGGTGTGAATATACTAGAATCCGGATCCACTT
CGATCGTAACTTCCACTGTCTTCGGTACTTCTGTATGCGGAGTGTTCGTTTGATTTGATG
TCTTCGTTTTCGATAGACTAATAACGCTACTGATCGTAGGCAGTCCGCTAATATTGTTAT
TCGTTGTGGAATTTTTAGTCGATCCACGTGCTAACACCGCTAATGATGTATTATCATCAT
ATATAAAACAATCCTTGTCTATTTTCGAAGAATTTTTAATAACGCTGCAATGTACCGAAG
CAGTTTCCCTGTTATTATTACCAGATTTTCCATTATCACTAGTTTTACATCTGACCGAAT
TCTCTTTCGGTTTGTCCTTACTGTTATTGGATGTTGGTTCATCGGATTTTTCAGATTTTA
CAGAGTTATTACTAAGGGATCTGTTGCTTTTACTGCGTCTTCTCTCAGACTTTGGAGTTT
CATCTTTATTTTTCTCACTTAGAGATTTATCTCTTTTCGATTTCTGTCTCTGCAATAATT
GTTTTTCCTCTTTTTGCATAATTTGTATATGTTTTGTTTTATCATCATCAGCCGTTGATG
ATTTGGGGCTACCTTTAGTATCGGTTTTGATAATGTGTTTATTTAATTTAGTCTGTATCG
TTATTTTCGTTGGGGTTTTTGGTTTTCCTGTTTTATCTTTAGTGTGAATCGTCTTATCCT
TCACCGCAGAACTGCTGGACGGTTCATCGTCTTTTACTGTTACTATTTGGTGAACGGTTT
TGACGTTTTCTTGCACATCTTTAGGATTTTCCGTGACAATTTCACAATCTTTTTGGCCAT
CTTTACTGCTGCTAGGTTCTTGACAGACCGCGTTGTTATCTTCTATTTGATTGTCTTTCA
CTCGTTTACGTTTTTCAGTTCTTCCGCTATCTAATATCGTGATAACGGCCTCTTCAAGGT
CCGACCGACGTCGTTTTCTTATTGTTGTAGAAGTTCTAATATCCCGTTTGACATCTTCGA
TGTTGATTATTTCAACGTTCATAGATCTGTCTTTGTCCACTGCAGCTATAGAATCGTCAT
CTTTTGTTAAATTAACATCATTATCCACTCCATTATTAGGTGATAGCCTCAAAGGATCTT
CCATTTCACTGATATCACAATCGTTGAAACTCTTCGATCTTTTTGAGGACCTTCTGATCT
TGTTCTTGCCCAAATTGGGTGATGAATTCAATGATTTATTACTAACAGGCGTACGCACTT
CACCTTCGAATGATGGTATCATCATTTTAAGTTGTTCGTTTAGTTTTGTCGGATCAAACT
GTGTCTTGAACGGCGGGTAAACAAATTTTCCATACTTTTTCGATACATTCCTTATGTGCT
GTTCTGCTTCCTGCATACTGTCCAATAGATCCTGACGTTTTGTCCTAAAATTATTAGGAT
CTTTCTCTGAATATAGGAAGCAGTCCTTAGCCGGTACCCAGGCTCGGTCGTGGGCACCGA
AGAATCTAACATCCACCAGTCCTGCTTGACTAACCGACATGCCCTTGGCAGGCCAATATG
GAAAACCTTTAAGCTTAGCCCAAAGCAGTATATGTGGTGTGGAGCAGACATCAGTGAACC
AGGTCGGTCTGCGGGCGTGCGCCGCCGCGTAACACTCCGGGCACGCTTCTATCTCGCCCA
TCTCAGCGCGACACGATCTGACCAACGCACGAGCCCCGCTTGTCAGTTTAGATTGTAATG
TGTTGAATATAATACTATTGTGTAGTATCCATTGCGCGTCTGCTGCGAAAGCCTCCGTGC
TACCATATAGCCCGTTAGCGATGTTTGACTTCATCAGCGATAAATCCATAGGACGAATAA
TGTACTTCGCGTAATCAGGAAACACTTCCCGATCTACTCTGTTTACAAACGGTTCCACCC
CGTTAATTTCCATCATTCGCTCCAATGCAAATTTCAATAAGTCACAGAGCATACCCAGCG
AGATCTTTTTCATGGCTGGGGATCTGGTTTCTGAACTTTCTGCATGCAATATATTCATAC
AGTCAGGGCAAACCCAACATTTTTCATTATTTGTTTTGTTGCGTTCTGCACTAGATAGAC
ATTTAAAATGGAATGATCGTGGGCAGACTGTACAAAACAAGGGGGTGTGTGCCTTCTCAC
TAGATTGTTCAACAGCCCAATGACATCTCCAGCAGTATGGGTCACTATGTAGCTTCCCAG
CAGTTCCTATATTAATCTCCTCAAGTTTTCTTTTTTTAGGTGTACTGCTTGAGACTGGTA
CTACAGACTCTTCCCTTACATGATTCTTACTATCATCAAGATCATCATCTGTTATATCTT
CATCTTTTTGAGATTTTCCCGTGACTGAATTCAAGAATTGTTTCACTTTACTTACAAACT
CAGGGTTCTGTGACCTCATTGATCTCTTTAAAACATTGCTATCAGATTTCTCACTGCAAT
TGCTCTTTTGTGATACATTACTGTTTCTTCTAGTTCCTTGTATCTTGTCTGCTTCGACTG
ATGAGTTCAAACTTACATTAGAGCTATCTAATACTGTTCTTGGCTTCCTCATTTTAGTAG
TGAGCTGTGTACATTCACTTATAATTTTAGATTCCTTTGCAGAGTTTATTAAGGATTTTA
ATTCTCTACTTATACTTTTACTGTGCTCCTTTTCAGAATTTTCTGAAATTGATTCAATGT
CTACTGAAGTTTGCCTCTCAATTGTAATATCTATTGGAATTACTGTATTGTTACTATTAT
GTTTTTTCTGTTCTTTTGTTTGATTTTCATTTGTTTTATTTTTTTCTGTTGCTGACATCT
G
(4441 bp)

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