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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28986_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_transport_protein_Sec24C_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:16.50 TPM:16.55
ORF EntryO_SariMG10387_complete:A_SariMG_comp28986_c0_seq3
Sequence
(Nucleotide)
CGAATACGTGGCCCCGAAGTTCTGTGTGGTGTATGTGTCTTGTTTATATTTTTTATTGCG
TTAATTCGTTATTTTCATTAAAAAAAGCCAAAGTTTGGCTCAAAACAATATGATGAATCC
ACAATACCCACCTCCGGGCCAAAATAATAATGTTCCTGGCAACCCTCACTTTCCACCTAC
ATCTCAAGAGTATAACGGTGTTCAAAATGCAAATATATATGGTCAGATGCCACCAAATGG
GCCCCAGAAACCTTATGACCACATTGACATGTCACATAAAATGCAGAATATGAATCTGAA
TGGTCCTCAAGGTTTTACATCAATTCCATCATCACAATTACCTCCAGGTCAATTTTCGCC
AGGTTATAGTCCAGGGCCTGGTCAGAATCAAGGTTCGATGCCCGGTAGACCTCCAGTAAG
TGGTTCACAGTACCCACCATCAATGGTTCCAAGACCACCATCGTCAACTCCAGGACCAGT
ACCTGTTTCACAAGGTTTTGATAACATGAATCATCAGCATCCTCCAGGTGCTCACAATAG
GCAGTCATTACCTCCTATGACTTTAGCTCAAAATCCAGGCCAAATGCTTCCATTGTCGCA
ACCTTTAGGACCACACCAGTTTGGAGTAGATAAACCAAGTATGCCTCCAGTACTACCAAA
GCCTAACATACCTCCTCAACCTATGAGTGGTCAATCGCAGCCCAGTCCTACAAATATACC
GTTGGGTATGCCACCACAAAGTATGTCATCAGCCATGCCACCTCAACCCAGAGGGCCTAT
GGCTGGACAACCTGGTTTACCGCCTCAGCCTGGTCAACCAGGCTTGCCACCTCAGCCTGG
TCAACCAGGCTTACCACCTCATCCTGGTCAACCAGGTCATCTACCCCAGCCTGGACAGAT
TAATTTACAACAACCTGGACTTCCACAACCACCTGGATCAAATGTTTTACCGGCGCAACA
TGGACAGTCAGTTTTGCCACCACAGCTTGGAAAACCTGGTTTACCATCACAGCCTAATCT
GCCTGCGCAACCAGGCTTTCAACCACAATCAGCACAACTACCAGCTCACGCCGTATTACC
TGGAGGGCAAAGCCTGCCACCGCAGCCAGGACACCTTGGTATGCCACCTCAACCAGGACA
ACCGGGACTTCCGCCTCACATGGCTCAGCCAGGCTTACCACCTCAACCTGTAGCAGCTGG
TCAGAGACCAGTCCAACCAGGCATGCCTCCTCAACCTGGGCCAATGGTTGGTCAGCCAGG
TTTCACCTCGCAACCTGGCTTTCCTCCGCAACAAGGTCCAATGTCAGCACCTGGGCTTCC
TCCACAGCCAGGGCAACCGGGCCTACCACCTAGCCAACAGTTCCAACCAATGTCTGGCCT
TCCACATATGCCTCCACCGTTAGCTCAACAGAGACAATATCCCGGAGCGCCTGCTGTCGG
CCAACCAGGATTTGGAGCTCCACCTGGACCGCCAACTAGCGCTTATCCTGGCATGCCACC
TATGCCTAACCAGCCCCTACAAAGTCAGCCGATGCCTGGACAACAACCATTTCCTGCACA
GCAACCGTCTGGCTATCCACCACAATACCAGCCGCCGTTCCCTGGCCAACAGCCCAGTTA
CCCTGGGCAGCAATACCAACAGCAGCCACAGCAGAAGAGACTCGATCCTGATCACATGCC
CAGCCCTATTCAAGTGATGGAGGACGACCAACAGAACCGAGGCGGTCTGTTCGTGACAAA
CGAGAAGGGTTTGGTCCCGCCCTTGGTCACCACAGATTTCATTGTCGACGACAAAGGAAA
CTCTAGTCCTCGCTACATTCGCAGTTCGATGTACTCCGTTCCAGTGACAGCTGATCTGCT
CAAACAGACTGCCATGCCATTTTGCTTAGTTATATCTCCAATGGCGGAGACGGTGGGCAC
GGAGCCCGAGCCGCCGCTGTTGGACTTTGCAGCCCTGACTGGATCCCCAACGATGGGTCC
GGTGCGTTGCAGCCGGTGTAAAGCTTACATGTGCCCAAACATGAAGTTCGTCGACGCCGG
TAGACATTTCAAGTGCCCCTTCTGCAAAGCCACCACTGAGGTGGCAATGGAGTACACGCA
GTACGTGAACAGCATGCAGCAGTACGGCCGTGTTCCCGCAGAGATGGCGCTCGGTACTTA
CGAGATCGTAGCCACTAAGGAGTACTGCAGGAACAACACGCTGCCGAATCCGCCGGCGAT
AGTTTTCGTCATCGATGTCTCTTACAACTCTATCAAAAACGGTTTACTCCAAACCGTTTG
CGACAACATCACCAATATTATAGAGGCGTTACCGAAAGACGAACAGACTGGCAGAAGTTG
GACTCGAGTCGGCTTCATTACTTACAGTTCTACGGTCCACTTCTACAATATCAAGGGCAG
TCTGGCCCAGCCCCAGATGATGTCAGTTGGCGACGTGGGCGATATGTTCGTGCCCCTGCT
GGAGGGGTTCCTGGTGCTGCCCGAGGAGAGCGGGCCGGTGCTGCAAGCGCTGATACAGCA
GCTGCCGACGATGTTCCAGGATAATAAGGAGACGGAAACTATACTATTGCCCGCGGTACA
AGCCGGTCTGGAAGCCCTGAAAGCTGCTGACACAGCGGGACAGCTGCTGGTCTTCCATAC
AACGTTGCCGAGCTATAACGCGCCCGGCAAGCTCATCAACCGTGAAGATAGGAAGGTCTT
AGGCACTGACAAGGAGAAGCAGATACTCAGTCCGCAGACGACTCAGTACAATGAGGTGGG
ACAGTCGTGCTCCGCCGCCGGAGTCAGCGTCGAGCTGTTCGTGTGCAACAACGCGTACGT
GGACGGCGCCACTATCGGTCAGCTGGCTCGACTCACCGGCGGCCAGATTCACAAGTACAC
CTACTTCACGGCGGAGACGGACGGGCACCGGCTGGGCAGCGACGTGACGCGCGTGGTGGC
GCGCAGCGCGGCGCACGACGCTGTGATGCGCGTGCGCGCGTCTACCGGCGTGCGCGCCAC
CGACTTCTACGGACACTTCTTCATGTCCAACACTACTGATGTCGAACTCGCTGCCATTGA
TGCGGACAAAGCCATAGGTATCGAGATAAAGCATGACGACAAGCTGACCGGGGAGGACGG
GGTTTACATCCAGGCGGCGCTGCTGTACACGCACCGGTCCGGGCAGAGGCGGCTGCGGAT
CCTCAACCTGGCGCTGAACGTGGCCCACCAGCTCGCCGACGTGTACCGGAGCATGGAGCT
CGACACTTGCATCAACTTCCTCACCAAACAAGCGGTGTGGGCGCTCCGGGAGCACAGCCC
CCGTGCGGTCCGCGAGGGGCTCTCCAGCCGGTGCGCGCGCTCCCTGGCCGCGTACCGGAG
GCACTGCGCCTCGCCCTCCTCCGCGGGACAGCTCGTGCTGCCCGAGTCCATGAAGCTGCT
GCCGCTCTACACGAGCTGCATGCTGCGCTCCGACGCGATCGCCGGCGGTCCGGACATAAC
TTGCGATGATCGTTCGTGTGCGATGTACCGCGCGCTCACCGCGGACGTGGCCACCTCCCT
GGTGTACACTTACCCCCGACTGGTTCCGCTGCACCGCCTGCAGGACCCCGAGGAGCCGCC
GCCGGCGCCGCTCCGCGCCTCCGTCGACAAGATGAACGAGCACGGCGTCTATCTCCTAGA
GAACGGTGTCCATATGCTGGTGTGGGTGGGAGCGAACGCTTCCAGCGAGTTCGTGCGGGA
CGTGTTCGGGGTCGCCTCCCCCCTCCACGTGGACACGCAGGTCTGCGAGCTGCCGGACCT
CGACACCCCCCAGAGCCAGGCGGTACGTGCGCTGCTGCACGACGCCAGGGTCAAGAGACG
CTCATACATGCGGCTGTGCATAGTCCGGCAAGGCGAGAAGGACGAGGGTCAGTTCCGGCG
GTGGCTGGTCGAGGACCGAGGCCTGGACGGGGCGGAATCCTACATGGAGTATCTGATGAC
GACGCACAAGCGCGTCCAGAAAATGCTTTAACTGTAATGCGGCAACACGATAAGATGGAG
GCAGTTCTACGTCACTTCCTGGTGGAGGACCGCGGCGTCGACGGCAGCGCCTCCTACGTG
GACTACCTCTGCCACATACACAAGGAGATCAGGCAACTACTATAGCACTCGTATGACCAC
TAGATCACCACCAGAAGATCTTCGTATCTTCGGATAATTCTTACCTGTATCTCAGACTCT
TATAACTATGAAATCTAGACTTAAAGATACGTTTTCGACCTGGAAATCGGCTTTGCATCA
TCGATACTTCCTACTCGTATCTCAGACTTCTCTTAAGGGCTAGCGAGTAACATAATAAAA
GTTTGGAAAAGTCAAGTTAATATGTAAATAGATTATGGACAGTTGCAAGACATAATTTTT
GTATATTTAAAAAAAGGGGTTCGGTGGCCATTGTGAGTTTTTCTTGTGAAAGGTCCATAG
TTGTAACTTTTGATCGCTTGTGGAATATCCTGTAAGCCATGGTTGCAACACGCAAAAGAC
ATTCGTATGAAAATATACCAGATTTTAATTCTAAAAACTAATCTCAACACCATAACAGAT
AAATAACATTAAAATATGCTCTTTATTTTTATTTTTTTTTAACTGAACACAACGGAAACT
AGCAATAGTAATTACATTTATTTTAGATTTTTTTTAAATGACAAATAAAATCAAATTATC
TAGTTTCATACAAATTGAAATTATATTGGTTTGCAATTAGACCACAATTTTTACTTAGCG
CCTCAGCCGCTTGAAATTATCAATCACAAATAGTGCTCAAAAGACTAGTACTTGCTAGCC
ATTTTTTGTGTTTAACGTTTGTTTGACAGACGTCAACTGTCAAACTTTTGGCGGCTTGGA
TATTAGTCTTTTAGTCCACTTCTCGTCATGCTGCAGTGTCAGGCGACAATATCTTAATAG
AAATAAAATATTGTATTTATTTTACCTGAATCGACTACCAGTATAACCGATGGGTGCCCT
TTTATTAGACTGCCTATAATTTTATTTGCATTTTTTTAACTGGGATAATTTGACCACATT
AAGTAATCTTTCACTCATATGCTCTGCGTGAAAGAGAACACAAGTGGTCGCAATTGTGGT
AGGAGGAAAAGAAATAGCAATATTTCGACTCGCATGCGATTCCCAGTACAATTTAGCAGT
TTAAGGGCCGATTTTTTGATCCGTAGT
(5187 bp)

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