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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28983_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LIM_and_SH3_domain_protein_Lasp_isoform_X4_[Papilio_polytes]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
Transcript
Level		FPKM:13.30 TPM:13.33
ORF EntryO_SariMG10372_complete:A_SariMG_comp28983_c0_seq3
Sequence
(Nucleotide)
TTACTGTGGTCTAAAAACACCTGGGGAACATGAACAGTGTTATTTGTATTATGCAATAGC
CGATAAAATACATCGAGTTTAATATTATATAAGTTGTATAATTTAACATTAGAATATTTT
AATGGTAATAAATTAAATATATTAATTTTCGAGGGTAACCCTAACGGCCGCCATTTGTCA
TTTTTTGGCATGCGCGTTCGGTGATGCTACGAAAATTGTGCTCGGGAGTGTTTTCTAGCG
ATTTATAAACTTTTGTAAATTGTGAAAACTTGTGTTGCTCTGTGGTATACCTGTGAAGTT
ATTTTATCATTGTTCTGTTGTTTTGAAACGTTTTCATCATGAATAAAACTTGCGCGAGGT
GCGAGAAAACTGTTTATCCGACAGAGGAATTGAAATGTTTGGACAAGGTGTGGCACAAGG
GTTGTTTCAAATGCCAAGAATGCGGTATGACACTCAACATGCGCACCTATAAGGGTTATG
GGAAGCTGCCGTATTGTGAAGCTCACGTGCCAAAAGCGAAACCGACGACAATGGCAGAGA
CGCCGGAACTTAAGCGGATAGCTGAGAACACAAAGTTACAGAGCAACGTCAAGTATCACG
CAGATTTCGAGAAGAGCAAGGGAAAGTTCACACAGGTAGCAGACGATCCGGAAACATTGC
GAATTAAAGCCAACACGAAGATAATAAGTAACGTCGCCTATCACGGCGAATTAGAGAAGA
AAGCCCAGATGGAGCGCCAGAGGATGATCAACGAGGACGGCGGTCATCAACACAATCAGC
AGCAAAACAGACAGATAGGGCGCGTCACAGACCTGGACCCCCTAGCCAATGAAGTCCCGA
GACCCCCGTCCAGCCAACAGAATCAGCGAGTGTTCATAGCTATGTACGATTATGAAGCAA
ACGACAGCGATGAGGTATCGTTCCGCGAGGGTGATCTGATAACGGACGCGAGCGCTATCG
ACGAGGGCTGGATGACAGGACGCGTGCACCGCACCGGTCACGCGGGTATGCTGCCAGCCA
ACTACGTAGAACCGGCACCCGCTTCTGCCCTCAGGCATCTCGACTGATACATCATTCTGC
CTTCCCTCGTACACACGCCTAATAACACATTACGTTCTAACAATCTATGTCGTTCATTAT
AAAAGTGAATTGAATTTTGGAATAAGCTCGAAAGGCCTTTTAATAAACCAAAAAAAAATG
AAAAAAAAAATCAAAATGATTATAAAAGTTTTTAAGATAAATTACTTTGTATCAAAAATA
TGCACGTGTATTTTGATACGTGGTCAATAGACGATCCCATACTTACTGACTTATAATGTT
TATGTAATAAATATTATTTAGCCGTTTTAATTCTATTCAGTACATAAGTGATCACTTATA
TACATAATTTTTATAAAGATAGAAAAAAAAATGGCGACTTTGTCTTGAAAAAAAAAAATA
GTTACACCATTTTTACAATGAACGAGATATATTGAAAACAAATCTTTGCAATTATACCGT
TTATTAATAATAGTTTTAGTAAAATATAGGGTAATTCTTCTGTCAATTTTTCAGTTACAG
GGAAATTACTTTTCCAACCATGAGATTCAATTTATTAAGTACCTCCCTCCCATTGGTCAG
GTTAAGTCGTTGTTAATAACCAGAAGTATGTCATCCAAATAGTCAACGGTTCGCAGTAAA
TTATCTTTCCAATTACTGTAAAAAACATCATAAGGGGATATTCATGGGTTACGTGAACGC
ATGATTTTGAATCTTTTGACTTTCCGTTTATCAGCAATTAAAAGCAAAAAATAATAAGTA
AATATTCCTTACGTAATTACCATTCAGACGCCCTCGTCTCCCATATCATCAAAAATAAAC
AAAGCATAGATCCTGACGTCTGACCTGTCTGTATTGGTCATTTAATAACTAATAATAATC
AGGATTTTACAACAAATTACTAATCAACCCGTAAGTGAATGTAGAAACACATTTATTGAC
ATCATTTCAATTCTAAAATAATAACAAATGTTTCTAGAGAGTACCGTTCGAAGATGTCTA
TTAAATGAATGAGATTATTTATTTCTGTCTAATCAGATTTTAGCTATGTAGCTAAAATTT
AAAATAACAATAATATTAATCATATTTATAAAAAAAAAATTGAAAGATAAAAAACCCCCA
ATTAATTTTCCTGAAATTTAAGAGTAAAATCCCCGTGTTGGCAACACTGCGAATATGTCA
ACGTCAATGCTGCTTCCCTATAAGACCATTTTTGAGACTTGTCATTTGAGACCAAAATAG
ATTGACTTTGGTATATAGTTATTATATAAGAAAAATAATTGGGGGGTTTAACAAGAGGAT
ATTATCTTCTCTGAGGATTTTTGTAATATTTCACTAATCTTGATACACTTATATTCTAAT
AGCTTTAAAAGTTATAAAAAAAACTACCATTTCCTAAATTAAATTATATGATTTTCCCTC
AAAATAGTAAAATTCTAAAGTAATTAAATACAAGGATCAAAATTTCAAATGGCTATAAAT
CAAATTTAACGTTTTGTTTGTTCCATCCTTTT
(2552 bp)

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