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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28983_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		LIM_and_SH3_domain_protein_Lasp_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
Transcript
Level		FPKM:0.33 TPM:0.34
ORF EntryO_SariMG10370_complete:A_SariMG_comp28983_c0_seq1
Sequence
(Nucleotide)
TTACTGTGGTCTAAAAACACCTGGGGAACATGAACAGTGTTATTTGTATTATGCAATAGC
CGATAAAATACATCGAGTTTAATATTATATAAGTTGTATAATTTAACATTAGAATATTTT
AATGGTAATAAATTAAATATATTAATTTTCGAGGGTAACCCTAACGGCCGCCATTTGTCA
TTTTTTGGCATGCGCGTTCGGTGATGCTACGAAAATTGTGCTCGGGAGTGTTTTCTAGCG
ATTTATAAACTTTTGTAAATTGTGAAAACTTGTGTTGCTCTGTGGTATACCTGTGAAGTT
ATTTTATCATTGTTCTGTTGTTTTGAAACGTTTTCATCATGAATAAAACTTGCGCGAGGT
GCGAGAAAACTGTTTATCCGACAGAGGAATTGAAATGTTTGGACAAGGTGTGGCACAAGG
GTTGTTTCAAATGCCAAGAATGCGGTATGACACTCAACATGCGCACCTATAAGGGTTATG
GGAAGCTGCCGTATTGTGAAGCTCACGTGCCAAAAGCGAAACCGACGACAATGGCAGAGA
CGCCGGAACTTAAGCGGATAGCTGAGAACACAAAGTTACAGAGCAACGTCAAGTATCACG
CAGATTTCGAGAAGAGCAAGGGAAAGTTCACACAGGTAGCAGACGATCCGGAAACATTGC
GAATTAAAGCCAACACGAAGATAATAAGTAACGTCGCCTATCACGGCGAATTAGAGAAGA
AAGCCCAGATGGAGCGCCAGAGGATGATCAACGAGGACGAGATACCGTCAACCGAAAATT
ATCACCAACAAATCGACAATTACGCGACCGAAATGTTACCGCCGAACGTTCCGGCGCCGA
ATTTACCGCCGAAGAGTCACTATCAGACACCGACGACGCAATACCAACAACCGATTGATA
CACAACATTTACAACATCAACAACAAACGCACAACCAAACGGTTGTCACGTCGCACCAAC
CGATGGTGATGCAATACAACCAACAACCGTTGACAACGCACCAACACCAACGAGCGATGA
TGAACCAACAATCGCACAACCAACAATCGCACAACCAACAATCGCACAACCAACAAGCTC
ACAACCAACAAGCGCACAACCATAACCAAAACCGCTATCAAGAGCCGCAGTATTACAAAC
CGAAGGAGAATTATCAACAACAGGGTCAAGATTACCAGGGTCAATATTACGGGCAGTATC
CGCAGAATTATGGTGTACCCGCACAACCAAAGATCGGGAGGATACAAGACTATGACCCTT
TAAGTGACGGACCTAGAGCACCTCCTAACACCCAAAGGGCATCGGCCACTTTGATATATA
ACAGTACGAACGATGGAAAACAAAGAGGCGGTCATCAACACAATCAGCAGCAAAACAGAC
AGATAGGGCGCGTCACAGACCTGGACCCCCTAGCCAATGAAGTCCCGAGACCCCCGTCCA
GCCAACAGAATCAGCGAGTGTTCATAGCTATGTACGATTATGAAGCAAACGACAGCGATG
AGGTATCGTTCCGCGAGGGTGATCTGATAACGGACGCGAGCGCTATCGACGAGGGCTGGA
TGACAGGACGCGTGCACCGCACCGGTCACGCGGGTATGCTGCCAGCCAACTACGTAGAAC
CGGCACCCGCTTCTGCCCTCAGGCATCTCGACTGATACATCATTCTGCCTTCCCTCGTAC
ACACGCCTAATAACACATTACGTTCTAACAATCTATGTCGTTCATTATAAAAGTGAATTG
AATTTTGGAATAAGCTCGAAAGGCCTTTTAATAAACCAAAAAAAAATGAAAAAAAAAATC
AAAATGATTATAAAAGTTTTTAAGATAAATTACTTTGTATCAAAAATATGCACGTGTATT
TTGATACGTGGTCAATAGACGATCCCATACTTACTGACTTATAATGTTTATGTAATAAAT
ATTATTTAGCCGTTTTAATTCTATTCAGTACATAAGTGATCACTTATATACATAATTTTT
ATAAAGATAGAAAAAAAAATGGCGACTTTGTCTTGAAAAAAAAAAATAGTTACACCATTT
TTACAATGAACGAGATATATTGAAAACAAATCTTTGCAATTATACCGTTTATTAATAATA
GTTTTAGTAAAATATAGGGTAATTCTTCTGTCAATTTTTCAGTTACAGGGAAATTACTTT
TCCAACCATGAGATTCAATTTATTAAGTACCTCCCTCCCATTGGTCAGGTTAAGTCGTTG
TTAATAACCAGAAGTATGTCATCCAAATAGTCAACGGTTCGCAGTAAATTATCTTTCCAA
TTACTGTAAAAAACATCATAAGGGGATATTCATGGGTTACGTGAACGCATGATTTTGAAT
CTTTTGACTTTCCGTTTATCAGCAATTAAAAGCAAAAAATAATAAGTAAATATTCCTTAC
GTAATTACCATTCAGACGCCCTCGTCTCCCATATCATCAAAAATAAACAAAGCATAGATC
CTGACGTCTGACCTGTCTGTATTGGTCATTTAATAACTAATAATAATCAGGATTTTACAA
CAAATTACTAATCAACCCGTAAGTGAATGTAGAAACACATTTATTGACATCATTTCAATT
CTAAAATAATAACAAATGTTTCTAGAGAGTACCGTTCGAAGATGTCTATTAAATGAATGA
GATTATTTATTTCTGTCTAATCAGATTTTAGCTATGTAGCTAAAATTTAAAATAACAATA
ATATTAATCATATTTATAAAAAAAAAATTGAAAGATAAAAAACCCCCAATTAATTTTCCT
GAAATTTAAGAGTAAAATCCCCGTGTTGGCAACACTGCGAATATGTCAACGTCAATGCTG
CTTCCCTATAAGACCATTTTTGAGACTTGTCATTTGAGACCAAAATAGATTGACTTTGGT
ATATAGTTATTATATAAGAAAAATAATTGGGGGGTTTAACAAGAGGATATTATCTTCTCT
GAGGATTTTTGTAATATTTCACTAATCTTGATACACTTATATTCTAATAGCTTTAAAAGT
TATAAAAAAAACTACCATTTCCTAAATTAAATTATATGATTTTCCCTCAAAATAGTAAAA
TTCTAAAGTAATTAAATACAAGGATCAAAATTTCAAATGGCTATAAATCAAATTTAACGT
TTTGTTTGTTCCATCCTTTT
(3140 bp)

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