SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28970_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_putative_ATP-dependent_RNA_helicase_DHX33_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000182 F rDNA binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0033613 F DNA-binding transcription factor binding
GO:0044822 F RNA binding
GO:0045943 P positive regulation of transcription by RNA polymerase I
Transcript
Level		FPKM:0.47 TPM:0.47
ORF EntryO_SariMG10325_complete:A_SariMG_comp28970_c0_seq2
Sequence
(Nucleotide)
ATAATATTACTCTTACCGGAGCTGGGAACTGGGAAGAGAGTTCGATCAAAATAAATTGTA
TAAAAGTAAAGTACGAAGTGAAAAAGAACACAGTAAACTCGTTTTGCTTATGGATGGGAA
CCAAATAGTGTACCAATTGTAGTAACTGTTTTAAAAATGGATTCAAAATACGCCTCAATC
GGAGGCGTCAATGAGATTAATGATAGTTTTAAAAGAAAAAAGCCTGTGTTAAATATTAAT
GCGAAAAGAATTAAGTTGCCCAATAAATGTTCAAATGTACTTACTTCTGTGGCAAATGGA
CAAAGTATTGGTGGTGACTGTGTAAACAAGATCGTTAAGGAGTCAAAAGATAACCTACAA
GAGGCAAGGAGACAATTACCAGTGAATATGGTGAGAGGCAGGTTGTTGGAAGAAATAAAA
AAAAATAACATAATGATATTGATTGGTGAAACTGGAAGTGGCAAGACTACACAAATTCCT
CAATTAATCCATGAACAGAGAATTGAAGGTCTTGGAGCTATAGCTGTAACACAACCTCGA
AGAGTAGCTGCTATTACTATAGCGTTGAGAGTTGCTGCGGAAATGGGTACTGAAGTTGGA
AACATTGTTGGATATTCTGTGAGATTTGAAGATGTTACAAGTCCTACAACTAAAGTGAAG
TATTTAACAGATGGGATGTTGCTAAGAGAAGCAATTTTAGACCCTCTTCTAAAAAAATAT
TCAGTAATTATTTTGGATGAAGCCCACGAGCGCACAGTCAGCACTGATGTTCTATTTGGC
ATTGTTAAAATTGCTCAGAAAGAACGAAATGAAAGAAATTTAAATCCTCTGAAGGTTATA
ATTATGTCTGCAACAATGGACGTGGATTCATTTCGAAAATATTTTGACAGCTGCCCTGTA
ATATACTTGGAAGGTCGGACGCATCCTGTTACTATTTATCATTCAAAATTTAAACAAGAA
GACTATCAGTATGCAGCCGTTTGTACAATATTTCAACTCCATTCAACGACTCCACCCGAT
CATCACTTCCTTGTGTTTTTGACGGGACAAGAAGAGATTGAAACGGTTATGCATAACATC
AAGCAAATAGCAAAAGAAGCTTCAGGACCTCCAGTTAAAGTGTGTCCATTATATGCGGGT
CTGCCTGCAACACAACAATTGCAAGTATGGCAAGAGATAACTCCGGGAACCAGGAAGATC
GTTCTATCAACAAATATAGCTGAAGCTTCAGTTACTATACCGCATATAAAAGTTGTAATT
GACACTGGTGTTGTTAAAGAAAGGACCTGGTGCACAAGTACGGGGGCAGAACGTCTATCT
GTAAGGGCGTGTGCACAAGCGGCGGGGTGGCAGAGAGCCGGACGCGCCGGCCGGACGGCA
CCCGGCTTCGCTTACAGACTCTACACCGTAGCAGAGTTTAAACAACGTTCACCGTACACC
ACACCTGAGATTGTCAGGTGTCCTCTTGCACCAACATTATTATTATTGGTGGCAGCAGGA
ATAGCACCAAGTTCGTTTCCATTAATCGATAGTCCTCCACAAGATTCTATCAAAGCATCT
TTGATTTTACTCAAGGAATTAGGTGCCATTGACAATGAGATCACTCCAAAACTAACATTA
TTAGGTCGAAAGATGTCAGCTTTTCCAATTGATCCTAAATATTCTAAAGTAATTTTAAGC
GCACCCGAGTACAATTGTTTGGATGAGGTTTTAAGTCTAGTCGCTGTATTGTCAAGTGAG
AATATTTTTCATACACCGATGCACAAAAGAAACGAAGCTGTTAAGGTTAAACAAAAGTTC
GTGTCTCCATTAGGTGATCATATTACATTCCTGAATGTCTTTAAAGCGTTTTGCAAAGCG
ACTTTGAAAAAGCAATGGTGTAAAGAGAATTATCTTAATCATAAGAATCTGATTTACGCT
TCCGAAGTGCGCCAACAGTTGTTGGCGATTTGTCAAAGATTGAACCTAACAGTCTCTAGC
TGCGGATCAGCCACTGATCAGGTAATCACTATTCTATATAACTATGGAGGGTAGAGTTAA
GAAGAATCATCTGCGTCTATGAAAAGTGTCTGTCGAAATGCGTTAAATTACATTGACTTC
ATATTAGCATCCGGGTAAATTTTAAAGGAAGCGTCAAAT
(2139 bp)

- SilkBase 1999-2023 -