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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28965_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transportin-1_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006610 P ribosomal protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016032 P viral process
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0072372 C cilium
Transcript
Level		FPKM:2.92 TPM:2.93
ORF EntryO_SariMG10308_5prime_partial:A_SariMG_comp28965_c0_seq3
Sequence
(Nucleotide)
GACTCGGTACGAACTAGTCGAGTATGACTCGATGCGAACGCGACATTATTCGGTGATGCT
AAGTGCAATCGCGCCACTCTTGCGAAGAGATCGGTATCAGGTAGAAAAAAACAAACAGGC
GAGATGAAATTAAAAACGCACATAACACAGGTAGTAAGTAATATATCAGAACGATGTGTA
TTTTATAATATGTGTAACGTAATGTAGTGAGGTGTTGGCACATACTGCGGCGGCGGAAGC
GGACGTACATCCCCCCCGTTGTGACGCGAGTGACGTCTCCCTACGCGCTCGGGTGCACTC
CTCACCCGCAATGTCTTCCCGACCCGTGCTGACATTAAATCCCCGTTACGAAGTAGTGGT
GCCTATATCCCGCACATTGCCGAGAGCCGCGCGCTCAGCTGCACCGGGAATTGGTCCGTG
AACCGGCGCCAGTTCTCCTCGCCGACTTGATTCTTGAAGCCGTGTAATATCTTCGTGAAC
ATCTCCTTGAGATCGTCTTTAGGGTGCGTCCAGGACCCGACGGCGTCACAGAAGAACATG
AAGTCTGGCACGACGCCGGCCGGATTCACTTGTATCATCTGACAGATGCCGCGGAATGCG
GAATCCTTCTCGTCGTTGTCGCGTATGTTCCGCAGCGACGTGCACCACTGGCGTACAAAT
TGATGTAATACGGGTGCGACGTCGTGGGGACACACATAACCTAGCCGACCGATAGTAATC
GCCGTGTTTTCAAGAAGCGTCTTCGGCGTGTTCGGTCTATTTATGATTTCAACTAAATGA
TTCAATACTAGGGGAACATATTTCGAAGTTTCTGGACCTAACTTAATACTAATCTCGCCG
ATAGCCCAAGTCGCGTTGTTGCAGACAGATATCAGCTCCGGATTGAGGTTCATCCCGAGT
ATCGGCAGAAACTCCGGTATGTACGGTAAAACGTGTTGGAAACACGCCTTCGTCAGATCA
CCCAACAGTGCGAACGACGATTGACGTACCTCGGGCATCGGATCCTGCATGCACTGGTAC
AGGAGCTGCATCAGGTTCGAATTCGAGACCAGGTGATCTATGTGACCGTCCAGTCCTTCC
GCTAAACCGCTAAGCAAGTCCAGGGCCACGATCATGAAGTCTTTGTCTGGTGCTTCGAAC
TGTTCAGGACTTTGACTGTTCGCAATATTTTGATTTAACGTTTGCTCTATTAAAGATACA
CATCTCCTGAACACTGGTTCACAATATGGTAAGAATCCTGATTGTAAAGCTGTCGCTACT
GATGATAAACACTCAAGCAATGGAAACAGGTCCTTATCCTCATCCTTTAGAACGTTCCAC
TTGTTTATAAGAGGAGGCATTAACAGATTTATATACTCCGGTTTGTTTAAATGGTGTCCA
ACTGAATCGGCCAATGTTCCGATTGCGTCATATAATATTAGTAAATTCTTGTGTTGATAT
TTACTGAACGCATACACTAGGGTCTGTAGGATGTAGCCCAAGTAGGGTACTAATTCCGTG
CAAGCCTCCTCCTCTAGAGTGGCGAATGCAGAACATGCCGCCTCCTGCACACGCTTGTTG
TTGTCTAGTACACGTTTTAATAACTCAGTCATGACCGGACGGAGGTAAAGGTCATGTGAT
TGCGAGACAATCCAGTGCGAGTATCGGGACAACGTCCAGCACGTGATGGCCCGCACCAGA
GCCTTGCGCTCCGCCAGGCAGCACACGAGGTACGGCACTAGATCAGACAAGTGCGGCACC
ATGCCACCCATGCACCCGTCTGCCACAGCGCCCAGCGCCAGGATACCGCTCTCCTTAATG
ACCCAGTCTTCGTGAAAGAGTGTCTCTTTGAGAATAGGAAACAGTACAGGTAGCAGGTCA
GCACCAAACACGTTAGCGAGAACATCAAGTGCTGCAGCGCTGCATTTACGTAGATTCCAG
TCGGAGAGCGACCCGTCATCGGCTTCACCTCCCGCCTCATCCTCCGAGTCAGAGTCACCA
CCACCGGACATCGCGCTATCACCTGCACCAGCATTATGTTTGATGGTATGCGACCGTGGC
TTGTGGAATCGCGGGCGAATGTCCGATTCGCGGTCCGGTTCTGCGTCGTCGGCGTCGTCG
TCGCGGTCGCCGCGGAGCAGTATCACGTCCATCTCCGAGTAACGCATACCGCGGACAAGC
ACCGGCAGAAGGTCCGGCAGCCGTGGGCCCAGCACCTCTCGACAGACATTTTGTTCCGCA
AGTGAGAGCCAAAATTCACACGCCTCCAGAGCAACTCCTTCCTCTGGATCTTGCGTTCGC
ACCAATATATACTCAATTATATTGGGTAAATGTGGCATAAGCCTGTCGAGTCGAACTTCT
AAAAGCAAGACCAGAGCATGACAAACATTTTTTCTAACATCCGGATCTTCATCCACTGCA
AGCTGGAATAAATTCTCAATGAAAGCATCAATGTGCATCATTAAGGCTTGTGATCTGCCC
ATAATAAAGTAGTTGACACACGCAATGGCATGACATCTGATTTTAGGGGACGAATGCCTG
AAGAATTGTAAAAACTTTGGTATCAGAATGTTCAATGGTCTATTTAATGCATCACTGTCA
AGTAATTCGGCTGTGTCTTCACATATCTTCTGAAGTGCTCCAAATGCCCCCTCACAAACA
TTGTAATCCTGCGAGTCAAGCATCTGACACAATGCTGGTAAGAGTTCAGGCCATGAAGTT
AGCTCTCCCTTGCTAGCTATAGTGGTGATAATAATGCCCACGGTGGCACGAATAAGTGGA
GATGGATCTCCCACCGCAGACAAACATTCTCGCTTAATAAACTCTGCGACTTCTGGTAAG
AAGCTGTTATAATGAGCTTTCACATTGTTCTTCAAAATCAAACCACTCAATGACCTTGTA
GGTTCCTCTTCAGATATAAGTTTTGTTAAAACAAAAATCAAATAATTGTTGAAATCAGGA
TACTTATTCAGTTCTTCCAGTTTTTGTTGAACAGCTCTTTGTGTAGCTGTATCTGGTGAT
TGCGACTCCTTGAGCAATGTTAGAATTTGTCTTAGTCCTTCTTGTTCAGGTTTCCACTCC
ATTTTCATAATAATTTTACAAAACGGTTTTATTTTACTCGGTCCTGTAAAAATCAACCAT
GCCAAAA
(3127 bp)

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