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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28932_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DENN_domain-containing_protein_1B-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
Transcript
Level		FPKM:1.76 TPM:1.77
ORF EntryO_SariMG10218_complete:A_SariMG_comp28932_c0_seq5
Sequence
(Nucleotide)
ATTGTATTATCCGTCTTAAGGTTTCGTAATAATTTAGAAATAAATTATAAAATGTGGCGT
ACAACTTTAAAGTAATTTTCTATGGCTTATGATGTTGTATAATAATTCGTTGTAACTTAT
CATCAGTAGGTACTGTAAAAGATGTAGGTAAGCAAAATTTCGAAAGGTCCACGTCGAGAC
ATGGGTTCCAGAATAAGAGATACTGTACGCTACTTGTTTGAATTATTTTGTGAAGTATCA
CCAGGTGATCACATTAGGGAACCACATATTGTAAGAAAATACCCTGAATCATATAAAAAT
GAAGAAGAGTTGAAAAATATACCAAAATTTACATTTCCTTGTCAGTTAGAAAATTCATTT
GCTCAACATTATTCATTTGTGTTGACATCATTGGATTCTAAATACACATTTTGTTTCTGC
CGATATGATCCAAAATCGAACACAGCACTGGTGTTGCTGTCTCATCTGCCATGGCATGAC
ATATTTTATAAATTATTAAATTGTATAGCTAATTTAAAAAATAGTCCAGAGAAGGCTCAA
CTGACTTCGTTCTTGGAAGCATGTCGAATACGACCACCCATGCCTGGACATACCCTCAAG
GTCATATATAATGCTGGGCAAGATGTATTCACTTGTCAAAGTCCTGATGCAAAATTACCC
AGTATACCGGAAAACTATAATTTAACGGAATACTTTAGTGCGGTCGATACGAAGTGTATG
GCCGGATTATGGGCTGCGTTATTGCATGAAAGACGGGTGGCAATAGTGGCATCGAAACCG
TCTCGATTGTCCGCATGTGTACAAGCGGCAAACGCAACACTATTCCCCATGTCTTGGCAG
CACATATTTATTCCTATATTGCCCAAGCATCTGGTCGATTATTTATTGGCACCGATGCCA
TTTCTCATTGGAGTTCCTGCTAGTGTAATGAAGACTGTAAGGATGTCAGAGATTGGTGAC
GTGGTTATATTAGATGTAGATGCAAACGAGCTCAGGACTCCATTTCATGATCTAGAGAGT
CTTCCACCTGATTTGGTAGCGAGTTTAAAGAGAGCTTTAAGTGATAAGAACGCTTTGGGT
GATGCCGTTTCAAGAGCGTTCCTACGAGCGTTAGTATGTTTAATTGGTGGATACCGGGAC
GCCATCAAAATTGAAAATGGTCAATTGATTACGTTCAACCCTGAAGCGTTTGTTCGGACG
AGAAAAAACATGCAAACATTCCTTAGGAAAATACTCCAATCGCAAATATTCCAACAGTTT
ATAGATGAAAGATTGGATTTGCTCAATTCGGGTCGAGGTTTCAACGACGAATTTGAAGTG
GAATGCAACAATTACGCCGACAAACTAAACACTGGGAGCGGCCAGAAACTAAAACAGCAG
TACCGCGATTGGGCCAAGAACGTCAAGAAAGAAGGTGGCGCCTTTTTCAAAACCGTCAAA
GAGAAGGCGAACCCGGCAGTGCAATCAGCTGTCAAAACGGTCCGTCAGGGCGGTAAAAAT
GTCAAGTCTGCGGTTAGAGGTCTTAAGAGCAAGATTCCTAGAACGAGATCAAGACCGTCT
TCGGTAAATGCGACGGATGATAATAGGTTTTCGTGTGGTTCCGCGACACCGGTGTCGTCG
GACTCGTCCGACTCGTCGCCGGCACATGATCCGCCCCCACCCCGCGACCCTCCCCCTGCA
TTACCGCTCGATTTACTCACAGAAATGGAGTACCTATTCAACAATAAGGCGGCACAGCGA
CGTGACAGTTTTCCAAACAGTTCGCACAATTCAGAAATTAGTCTACCAGCCAAGGCAAGA
ACACTGTCACCATGTGTCCCACCCCGGTTAACGGAACGTCCCCAAACCCCACTCCGTTAT
CCGATAATATCCACGAGGAAATTAATCGATTTAACCGATGCGCCGGTACCGCCGCCCCGT
ATTAGTGCAACGCTAAAACCGAACAACGATAATAACCATTTCGTTAGTAATATAACTAAA
AACGATACGCAGCCTCCGACTGATTTTCACACTAGCACGATACGATTCACGGAGGGTAGT
GATAAAGCTAAATTAAAACTAACACTATCAACGAATCAGAGGAGAGTGCCCCAATTGAGT
GTACAACCTCCGAACGGTTTAACGCCAAAGATAACAGCGTTATCAATAAGTAAACAGGGC
CCAGACGGCAGGCCTATAGCGCCGCCGCGACCGACGCTCGCTATGAACAAAGGGAAAATT
GTCGAGCCGTGTGGCTCTGATTCTGATCTCATTAAACTGGATTCACCGACAAAACTAGAA
GAGTTCGATCCGCTTAAGTGTCGTGATAAAAGTCAGAGATTAGAAAATGTCAAGTCATCT
ACGGACAGTGCGTTGTTACATGAGTATGGACTCGATTTTAGTCAATTCGGTATGTTAGGA
TATTCGGCAGGAACGAGCGCGATGCAAGATAACTCTAACGTTCCTAAAGGGTGGACTACG
TTCAACTAATTATATATATATATATTTATACGTAAAATATATTATTATACAATGTTCAAA
TATTTATCATAAACAATAAAGCATCTCGCGTAACGTCTTCCTAACCTGTGATATATTTCT
AGCTGGTGACTTTTGTAATATTATTTATTTTGTAATTAAAATGTTTTACATAAAAAAA
(2638 bp)

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