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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28919_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		clathrin_heavy_chain_[Bombyx_mori]
Ontology
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007291 P sperm individualization
GO:0007594 P puparial adhesion
GO:0008021 C synaptic vesicle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030129 C clathrin coat of synaptic vesicle
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0030135 C coated vesicle
GO:0030136 C clathrin-coated vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032051 F clathrin light chain binding
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040008 P regulation of growth
GO:0045451 P pole plasm oskar mRNA localization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0071439 C clathrin complex
Transcript
Level		FPKM:4.60 TPM:4.61
ORF EntryO_SariMG10198_complete:A_SariMG_comp28919_c0_seq2
Sequence
(Nucleotide)
TAAAATTTCAGTGAACAATATATATATCGTACATGAATAAATACAATACTAATAAACAAT
TAACTTTCTTTCAGCATTTTAAATAAATAAAATGTTACATATCGAAAGAAAGGTGAAAAC
GAATGAAAACATTATAATCGATCATAACTACCGTTTCTTTTCTTTTTAAATAGGAATGAT
TTGAACGATTCGTTGAAAGTGAAATGACACTTTCTCCTGTAATGGTTGGTGATAATAAAA
TTAAGGTGATTGCTCGCAAACCTATTATTTTTACGCGCTTTTTGTATATCTTAAACATAA
TTTCAGCAACTTTTACACTGACTTGAATTTCACTATTAAAAATCTATTTCACAATGCAGG
TCAGAGAGATCACCAAAATAATATATTTCTCAAAGTTAGTTCTGGGGTCTTCGTATTTTT
TCCTGTTAAAAAAAAATCGCCTTTTATTTACTTCAATTATAATTTAATAAGGCGATGGAA
AATGTTTTCTATCCATTCCCGTCTTTATAAGCACCCTGAGTAATAATAACGATAATTAAT
ATCCAATTCGATCGTTTAAACGATATTGTAGTTTTATATATAAAAAAAAATTGTTATTCA
GGTCAATAGCAGAAAAGAGTTTATAACATACATTACTAATTCAGTATTATCGAATATTAT
AAATAAATGAACAAGACGAGCCCCAGAATACTCGACCGAGTCAATGTAACTTGACAATTA
AGTGAAAACATCAATATATGTTACAGGAACAACGCAAACAAATATAACACGCGTGATATA
AGGTCTCTCGCACACTTAATAATAACATCGTACAGCTAAATCAGCCTAAATTAAATCTAA
ACACGCGTGATATAAGGTCTCTCGCACACTTAATAATAACATCGTACAGCTAAATCAGCC
TAAATTAAATCTAAACACGCGCCTAAACATTATAAATAATTTCTGAATACTAATCCGATC
TCTTTTTCAACTGGCTCATATAACATAATAGCATTATATACATATAAAATAAAGTTCAGA
ATGTTTCTTTTATGTAATATGTAGTTTGCGTTTGAGAAATTTATTCTATAATTGAAATAT
AGAAAGTAGGAAAGTCTCCAAAAAAAAACAATATCGACTTTTAGAAAACACTTACAAAAC
AGAATTCTTTCATAATAAAATTAATAAGTAAAACCGATAGTTTTTATTTTATATATAAAT
TTATATATTAATAATCTATTCTATTAATTTATTATTTATCAAACAGACCGCGGAAAACAA
TCGCTATGTACATATTTTCATCTAATAGCGAAATTATTTACTTCGGCTGATCTAGAAAAT
GCCGCATTTACATTTTAGCATTCATTAATAATCTGAGTATATTACATTTAATATATTTTT
GTTAAATTTAAATACGCATGGAGAAGGTCAAGAAGTAGAACAGTTTCTACATCTCCATAT
CGAAAATCTAGAATATTCTACGATACTAGAAATATACTGACGCAAGAATCTTTTAGAGAT
GTTAATATATATAATAATATAACTCCATATAATCATTTAAAATAAAGCACTTTGCATTAA
CGAGAGCTACATAGCAATCGAATATATTATTATAATAATTTGTACAGACTAACAATATTT
TAAATGTTTTTTTTTTCATTACCGGCTCAATTCACTAAGACTAACATACAATTTCTAATC
ACTTCCGACTGTTAATACTTTCATATAACAAACATAAAAATAGTAAATAACACCTAAATA
AACTTAGGCCACTATTTCAGTCTACAAACATAGAAACTTTTTTGAATCCAAGTAAAATAA
ATAAAAACTTTTTTGTTTTTGTTTTTAAATATCAAGGAACAAATTCGATGGTCGGAAGTG
CGTAGAAGATTGTATTTTGAAATTCGAACCGAGCTTCACAAACTCGAGAGAAAGAGATCT
AAACGCATTTATTTTTTCGTATCAACTATACCAATACCGTATTGGTACTGGGTGCTTGCT
GGTGGTGTTAATTTATTATGTGACGTCACGAACGCACTAAACTATGGCTGGGACGTATCG
CATGTGTGAGGACCTCTTTGCGCAAGTCGACGGCTCCCGTGTAAATCGGCTCAGAACTGA
GCGTAGTACCCCCAGGCGTGCGGGGAGGCATTACCCTACATCCCATAACCGTGGTACGGT
GCGGGCGAAGGCGCTTGAGCTGTGTAACCGTATGGAGATGGTTGTGGCGGTACTCCGTAG
GGCATTGAAGGGCCCGCAGTTAGCATGAGCTGTGGTTCCATGATCATAGCCGGTTTGGCT
TCGTGCTCCGCGCTCTCCGTGCTACGTTTAGCGTCAGCCTCTTCGAGCTTCTCCACTTTC
GTAGTTAATTCACGGACAGTCTGAATTAAGTAAGGCATGGCAAAGTCCATGATGTTGTGT
CTCCATGCGAGCTCGATCACGACGTCTGGTTTCAATAAATCGTAACACTGATATAGACAA
GCAGAGAAACATTCGAAGTTGTCCCGTTCTAAGAACCAATTGAGGAGTTCCTCGGCGACT
TCGGGTTGGCGGGATTCCGATGCGTATTCCATAGCGTCGGCGTACAAAGCGTCCTTCTTG
CAAAGCTCGACACTCTGCTTCCATCTGTTGTTACCTTTGTACAGATAAGCAGCGATTCTT
CTGAATTCAGTCAGCTCGTGTTTTTCCAATTGTTGGGCGAGCGCAATCGTATCGAAATTA
TCGAAAGCGTCTATCGATGTCCGTAAGCCCTGGTAATCTTCCTCGTCAATAAGCAGGGAG
TTGAGCGCTTCGTTGACCGCCTTATTGTTTAAACTCTGCACGGATCTGAGGTAAGCCTTC
ACGAGCTGGAGGTGTCCGGCTTTCGTGAAGAAGTTCACCGCACGCGTGTGATCCATGCGC
GGGGCCAGCACCAGCAGCAGATCGTTCAACAGCAGAGGCTTGTAGTCCAGGTAGAATTGG
ATCGCCTTGTAGTATAATTCCATGTTTGCCACTTTAGTGATGATATCTTTGAAGTGTCCC
TCGCGCCAAGCCTCGGTCGGATGCTGCATCATGGTGAGCGCCGCGTTGTCATACTCCTCG
TACTTATCATACAGGAACACTAATTCCGACCACAGGTGTGCGTGTTCCGCTGCCCGTAGA
ACCTTCGGAATGTTGACACGCGACCAGAACAGCTCCAAGTGTTCCCTCATCTTAGCCGGC
TTGTACTTAGAGTAGAGTATCGCCAGCTCTGTGAACATGCCCATGTGAGCTCGTTCCAGG
CCCAATGCCGCTTCCAATAAACTGATCAGTTCATCAAAGTGTCCCCGATCCTGATAATAA
TTGATAAGGTCCTCTAACTCGTCAGCGTGAACGACGATATGAAGGCCACACATTTGAGCC
AATCTGAACTCGCCCGCGTCGACGCAAGCGAAGCAAACCTCCTTCCATGTCCGAGTCGAG
TTAGCTTTCCTTGCGCTGTCGACGGCACCCTGGAATTCCTTGAGGTGCACAAGCGTAATG
GCCAACCGTGCAAAGTTGCTGACATTGTTGTACAACAGTTTGGCCGCGTTGTACATCTTG
TCGTCGAAGCACCGGTCTCCGATCTTTTGTATGTCCGCATGGTTCGGTCCGGAGATGAAC
TCTTCGAGGTCGGCCAGCCGTCCGGTGCGGGCGTAAGCGTAAATCAGTTCCGATTCGATG
TAAGACTCGCGCGCCTTCTTCCGGGCCATCTGTAAATATCTGACAAGATCATCCCATGAG
TCCTCCCGGGTGGCGGTGTCAACGACGTCCATGTACGCTGACGGGTCGTCCGCCTTGATG
TAAGAATCGATCGCCTCCTTGACGAGGCCTTGGTGCAGCTGCGCCTTCGCGAGCTGCGAC
CAGACGCCCGGCTCGTTGCACCGTTCTGCGAACTCGTACGCTCGCTCCAAGTCTTTCACT
TGTTCTATCAACACCTGAATAGCTGAGGTGTTGACGTCAAACTTCTTGAAAATAGCGAAC
GCTTCTTCGTATAGTTCATTGTTGATAGCAATGTTAGCGATGTCCGGGGCGTCGTAGTTG
TCTAGACGGTTGATGTACTCCATAACGCGGGAACGGTCCGCTTTGATAGCAGTGAGAATC
AATAGGTTTTGCAGATTTCTGTGATCCGAGAACACTGAACTGTCGAGTACGATCTTCTCG
AGTAGTTCAATAAGCTCGTTGGGCAGGTCGGCGGTCATGAAAGCTTTCACGGTCACCGAG
ATGTCCTCTGGGTCTTGTGTCTCCGATAACGCTGTTTGTACCACCTGGTCGATAAGCTGC
CTCTTGTACGGGTTCGATTCAGCGAGCACCTCCAGCCAGAGGTCTTGGTCGCGCCGCCTG
ACGAGGTAACGCGCCTGCGTCTTGAACAGCGAGTTGTCGTTGCAGACGGCGATCAGCTCG
CGATCGCACTGCCCGCGCTCGTACGCGACGCACGCGAGGTGCGGGTCGCGCTTCTCGCAG
TAACGGCCGACGACGCGCGAATCGTACCATTGATTTTCCTTAAGGAATCTCTCCGGATTG
TTATTTGAATCGATGTATATTTTAGCGAGAGCATTGTGCGTCGCTGGCTCTGTGCTACCT
TCATGGACACGTGTCTCCAACCACGGGAGGAGCAACTTCAATCTGTTACGCTTCTCTACC
TCGGCTACGAGTTCATCGGTTGAAAATTGACCGCGTACGACTAGAATCAGATTCTTTATG
ATATCCTCAGCGCAGTCCACGTCCAGTAACCCGCCAATAACAACTGGCAGACGAGACGGA
TTTACCTTTTGAACGTAAATCTCGATGTACTTCTGCAGGCTGTTCCTGTACAAGTACAGG
ACGAGATCGTGCACGAAATCGAACCGGTCACAGACGATGATCAGCGGCAGCTGGTCGGGC
AGCTTCGCTTCTTTAAGGAAGTTCTTGACGCGTTCAGCGTTGTAGCAGTTCGACTCGCGG
CATATACGCTCCACTTCTTTGATCTGACCAGTTTTACACGCTGCCTGAATGTATTTGAAG
TGCACTTCAGGGTCCTGGCTGAAGTTGACGATCGAGCCCAGGAAGTAGAAGAGGCCTTCG
TAGGTCTTGAAACTTTCAAATAATTCGATAAGCGACTTGGTGGTCAGCTGTTCGTGGTAT
TTAGTTGCGATTTGCACGCAGATCTGCAAGTTCTGACGTATGTTCGCTTGCAGCATCGCC
TTCAGGCATTCGAGGGAGTCTTCTACGGAGAGGCTGCCGAAGTAAGTGACGAGCCATTCG
GCCGGCAGAAGATGTGTGTGTACGACAGCACGTTTAATGTCGTAGAGGTCGGTGTAGTGC
TCGAGCGCGCGCTGCAGCAGCCCGGCCTTCTCGCAGAGCTGCGCGACGTGCGCGCGGTCG
TAGTGCGTGAACATCGCGTTCCCCAGTATCGCGTCCGCCACCTGAGGCGCCGACATCAGG
TTCATCTCCAGCAACCTTGTCTGCAGAGGTCCTTCCTCGGGGCGATTGTTCTTGAGCGCA
TCCAATAGGAAAGCGGTGCACTGCTGCACCATATTCTGTTCCATGAACACGTCTACAATC
TGATTGATATCCGCTAAAGGTGGATCTTCAGCCACCAGCATGCCCGCAAACCCGGCGCCC
TGCTCGGGGTTTGTCCGCATCACTGATCTCAGTAGGTAAATGTAGTCCGGGGTGTAACCG
ACCTTTTTAGCGTATAAGACAATTTTCTGGAACTGTCCGGTCTCCGCGAAGCACTGTATA
ACTTTGCTGGCAACATTGGCCCGGAGGTAGACAGACAATGCGAGTGTGGGGTCGACTTGC
TTGACGAGGTCGCCGAGTTCTTCTGAACATTCCAGTTTGTCCTCTTTAAGCCACTTCTCT
AATAATTGTTTACGACCTTGCAACAACACAGGCCTGCACAGTTCAAGCGATTCAAACTTG
TTCAACTGCGCTTGATCGAGCAATATCCCAAAATACTGCAACAGCGGCGAGGTTTGTCCG
GGCTGCGTTGGCACTTGCTGGAACCGCTGGATTGTTTGTGGCGTCCGGAGTATACCACGT
GGGGCCATAGCTGCTACTTTAGCAGCCTCTCCATATTGTCCATTAGTGAACAGCATATTA
AATTTCCGCACAAAGAGTTCCTCTGCTCCGGCGAGATTATTTCTCACTGCGATTCGTAAA
GCCAGTTCAGGGTTTTGCAGCACTGTATTAATGTAGGGCACTATAGAGTCCTCTTCTACT
GTCACTGAAAGGACTTGGCCTTTGCGATTCACACCGATAATCCCACCGGTGGCTTCATGT
GGCGCTGTCACGAATATAGTATCTGAAGAGATCCGGTTCATATAGATGCAGGTTCCGGTC
TCAATATCATACATGTGTATATAACCGTACTTGGTGATTAAGTATATGACATCGTACTTC
GGTGACACTTGCATAGCAACGGGGAAATCGTTTTGCGCCTCAGCCGGGAAGAATACATCG
ACTGCCTTCTTCGGGAACGGCTGGTTACCAGCTGGTGTTTGACCGACCTCAATAATATGC
AGTTTACCACCCTGGGCAGTTCTGACCGCGAAGCAGAATAAGGTGGACGGTTCGGCATTA
CCCTCCGCTTTGAAAGTGGCAAATGATGCCGCGTGGCCTTCGATGGGCTGTGAGCACTTG
CGCTCTACAGAATAGAGTTGCATAGCACCAACCACGCGATTCTGTTGAGCCGAGATACCG
ACGAGCAGTAACCATTGCTGTTTAGGATCGGTCCTGTAATTGATTATCTGGCAATCAGCG
AGCGATGAATGCCTGTCGAACATTTTGACTGGCGTCGAGTCACCTTCCATCGACCAGTGG
TATACGGACATCTTGGTCACTAACGCGAGCGTGTTCAATGAAACCCACTTCCAGAAAACA
ATGTCTTCGGACATTGTGTGAGCTTTCATTTTGGATTTCATCTCGATGTTGAAGATCTGG
AGTGTTTTTTGTGCTTCAACACCAGCTTTTCCTTTAAGTGCAATGACTTTGCTCGCCGGG
TTCATTATAGCAGAATCAGCACTAATTGGTCGACGAATTGGGTTAGTAGGGTCAGCCATA
TCAATGATAACCACTTCGGCAGTCTCGCCTACCTTCTCACGAACACAGATGAACTTATCC
GACTCCATAGTAAGGGTGTTGAAAGATATAGAAGCTGGATTGATCCCCACATTTGTGAGC
TGCAAATGCTCTTGAAAACGTATCGGCAATACTTGCGCCATGATCAATGTTCACTTCAGC
ACTATTTTATGAAACGCTTATCAAAGCGACTCTCTACAATCGCGGACTAATTAAAATATA
ATTCTACATTAAGAAAAATAGGAATTTATGAATTTGATTTATTTCGGAGAAATTTAGAGA
ACAATCTACGTCTGCGA
(7337 bp)

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