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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28878_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_DNA_helicase_Q5-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000993 F RNA polymerase II complex binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0043140 F 3'-5' DNA helicase activity
GO:0051301 P cell division
GO:0051304 P chromosome separation
Transcript
Level		FPKM:1.90 TPM:1.91
ORF EntryO_SariMG10070_internal:A_SariMG_comp28878_c0_seq1
Sequence
(Nucleotide)
TTTTAAATTATTTATTATATCTTTAGTTACTTCTAAATTTGCTGTTGCCCAATATAAAAC
TCCTAGTTTTAGAAAGAATTTATTTTATGATATTGTATATCAAAATTGCATTGACGATGA
AGTTGGTCATCTTTTAGAGTTCTTGAAGAAATGTTTAAAAGAAGAAGAAAATATCAAGCT
TAAAGACAAAAATGCAGTTATTGTGTATTGTCGAACTCGTGAACAAACAGAGCACTTGTC
TAACATGCTCACAAAAAGAGGGCTCAAGTCATTGGCCTATCATGGAGGGTTAAAATCTTC
GGAGCGCATATCCGTTCAGGAGGCATGGTCTCGCGGTGAGTGTCCCTGTGTATGCGCAAC
CGTTTCGTTCGGCATGGGCGTGGACAAAGCAAGCGTTCGTGCCGTTGTACATTGGGGTAT
TGCGCAAAATGTGGCAGCCTACTATCAAGAATCAGGACGAGCAGGTCGCGATGGCAAACA
GGCATTTTGCCGGATATATTATTGTCGAAATGAACGTAACGCTGTCGATTTTCTTTTAAA
AACTGAAATAGCGCGCGCTCACACCCCAGAGAAAAAGCAACAATGTAAAAATACCTATAA
AAGTTTCGAGATAATGGTGAAATATTGTGAACATGTCAGGTGCCGACATCAGACGTTTGC
AGATTATTTTGGTGAGGAGGCAGTGAGATGTGCGGGGCGATGTGACGCTTGCTCGGACGA
GCGCGCCGCTACAAGGGCGTTGCAGCAACACATGCGCCGCGCTGACTCCACCACTATGCA
ACTCTGCAATAACGACTACTCTGGCCTCTATGGCGAGGGACGCTACGGTCAGAAGATGGA
ATCTGAATCGTATTACGGTACCGCTGATAGCGAAGATTTCGATGAAGATGACAACCGAAC
ACAAATTGCCAAAGAAACGAAAGCACTCATCATGCAGGAGTTCGCTAATAGAAAGAAAAA
CTTAGAAGAGACGAGGCATCGCAACAATGATACAGAATCCGCTAAACATTCGAAATGCAA
AGCCGCTGAGAGTACAGCAAATAAGGTGAATGGTTTGACGATAGCTAACAGGGAAGGTTA
TCTATTACTCCTAAAAGATGCTCTGAGCAGTAATCTTGCCAGTATGAAAGGAGTGGAAGA
ACCTGTTAAACCATTGACAAAGTCTCATGTTGAACTTTGCGCTATCGAAATGGAATATGA
CGCCTTTTCAAATAGTACTGTTGTTAGTTTATACAGACGAGCTATGTCAAAATTGATATC
TTCAATAAAATCCTGTAAAGAGAACTTATTTCCACAACTCAAAACGTTTGATCCCAATGA
AGTAAACAATATGTCTAACAAATCGATGAAAGAATTTGAATCGAAACAAGGAAAATCAGA
AACACAACACGGATTTGTGAAAGCGTCACAGTTACAAATTGAAGATTTAGAGGGTAAAAA
TGAAAAAAGATCATTGTCAAAAGCTGATAAAGAAACAAAACGTAAAGCTAACTCATTTAA
AAGGGATCCTTTGACACAAACAAAACTTCAAGGGTTTTTCAAAAAAGAATCACTTCCGAG
TTCTAAGACTGATGAGAGTGATGATGATAACACTCTTGTAATTGAAGAAAATAATAAAAA
TTATAATGATACAACTCTTAAACTAAATGACGACACAGAAGCTAACAATAACAATGCAAA
TAATCACAACGACACAACATTAAAAATTGGCGACATTACAGACGATGCCGAATCAACTAA
TGAACTCCCATATAAGCCAAAAACTTTAGTAATAAATATTACGCTTCAAGGAATACCTAA
CAAAGATAAAGTAATTGACGACGAAAATGACAATATGGAATTGAACGATAGTATAAGGAA
ATCTCCCAAAAAAACAACAGCAAAAAGAAAAATTAAAGCCCTTTTTGGGGAATCCTCTGA
GAGTGAACCAGAAGTTGATAATCCAAAAAAGAAAAACAAAGCTAGTGATGAAAGGAAAAA
ACACGAGAAAAGTCATTCTGCTAAACATTCAGATAATGGCAAATCTAAGCACAAAGCAAA
AACAAGCAGTCCCATATGTACATCATTATTTGGTGAATCATCAGATGGTAGCGACTTTGA
AAAAGAACTAGTAATTGATGAACAGAATAATTCTATTGAAGATTCGAACAGAACACTCAA
TTTGAATAATACAAATGACAGCGAGACATCTACTAACAGTTTGCAAATAAATGACATTGA
TATTAATGAAGATGAAAAAGTTAATCTTAATTCTAGAACATCACAAGACAATGGTGACAA
AAATGTGGATATTAATAGATTAGTCAGCACGGAAGATGTGGAGTTAAATAAAGCTCATAA
ATTAAGTATAGAAGCAGAAAAAGTATTACAAAAGTTAAAACAATTTGCAGAACTTCCACC
TGAACCAATTGTTGATAAAACACAAACCACACAATCACCTATAAATGATATGGGACCCAT
ATCACCAAACATTGAATTAGAAAAATCTTCAATCAAAATCGAGACACACAACAAGAAGTT
AAGCTCGAGTGAAAATAAAGAACGCAGCAAAATAGAAGTCAAAGTAAAATACGAAAAAGA
ACGAGAAAACAAAGACCACGTGAAACGGACACATAAACATAAAGAAAGATCTGAACATAA
GGACAAAGACAAATTGAAGCACTCGGAAAGATACAAAAATTCACGATCTAAAGCGAAAGA
GAAAACGAAATACAAAATCAGATCATCGCCGACAAAAAAATCTGAAAAAGTGGATGTCGC
TAGTCTTGTAGTGAAATTGCTTATGCCATATTACAAAAATAAGAAAATCAGCAGTCGCGA
TCTATTTAAAATAACGGCGAGGCATATTGTTCATCAACTGCTGGCAATAAAAGTTACAGG
TACG
(2884 bp)

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