SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp28877_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATPase_family_AAA_domain-containing_protein_2-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0042393 F histone binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:2.35 TPM:2.35
ORF EntryO_SariMG10068_complete:A_SariMG_comp28877_c0_seq2
Sequence
(Nucleotide)
TATCATCGCAGTTTTGTGGTTTTAAAATTAATACAAGAGATTACATTTTTTTTTTTCGAC
ATAATTTGACAGAAAATCATCAGAGTAAGAAAGTATCGATTCACTAAAAATTCAGAGTTC
ATTTCTTCGCCAGTTTTAAATACCTCGAGACGATAGTTTGCAATTCCTGCGGCAGTTTAC
TCCTGTCGTACCGCGTCGAGTAAGAGTAAACGGTTTTACTCATCTGCGAGTGGAGATCGA
GTAACGCCGTCAGCCCTATACACCGTAGCGCTTGCGCGTTCTTATACACAATGTTATCTA
ACTCAGTCTTATTTATCAGTACTTTCTCTGCGTCTCCACTGTCATGCCTTGAATTTCTTT
TCTTTGGTGTCGTCTTTGTTGGTGACTTGTCCGTCGACTTTGTTGGACTGTCCGGGAGGT
GATTGTTCGCGGTGATGTTCCAGATTGTGTCGCAGTCGTCGCGCGGCCGCCGCAGCGGAG
CGTCGTCGTCGGACGCTGACGAAGTGGAGGGCTCGCCGCCGTTCGGCAAAGGCGTCGACG
TTATCGGCTTGTTCTCCTTCGACTCCTCGTCAGTTATACCCAAGCTATGATCCTTAAAAT
TCTTCTGCACAGTTCTAGGTCGTTTAACAACTAGTCCCTTTGACCAAGCGTTCATGCGCC
TGCGCTTGCGTTTCCCAGAATGCGTAGTGTCGCTCTTGTCACCGTTCTGCGTCGGCCTCG
ATATCTTCACGTCACTATTGTTCAGCGAATCTAGTCCCTCCGGTAAGTTAGAAGCGGTGT
ATATGAAGTCCGGGAGGTCCGTGTCGGCGGGGTCGCCGCCCTCCCGGCGCTTCCTCGCGA
TGTCCTGGCACTCGAGCTCGAAGTCGCTGTCCATCTCGACGTCGATGAGCGCGTGCGCGT
GGTCCCGCAGCGAGCACGCCTCGTGACGTATCTGCTTGTCCGACGACGTCCTGTCCGGAT
TATACTCCAAAGCGTTGGCGCATATGAGGTCGATGTCATCGAGGAACTCCTTGGCGCAGT
TGTATTTGTGCATGTCCACTTTAGTCATCATGGTTTCCAAGTCCATGGGCTGCTTTATGA
TATCTAAGTAATCCGTTACCTCCTCCAAGTCAACGGGTTTAGTGAACTTGTAGAAGCGTC
TGTTCGATGCGAGCTTCCTGCAGATGTCCCGGAGGAATATCCTCAGTTCCCGCAGCTTGT
AGTCCTCCTTGCGCTTGCGCCGGTATACCTCCTCGTCGGTCTCGCGCGGCGGCGGGGGCG
GGGGGGCTCTCGGTAACGGAGGCGGTGGCTCCTTATTTTCCACAGGAGGCGGATCCAGTA
ATGCTTCAGCTACCACCGGCTTCAAAAACTTAATCACTTCAGACGTACTCGGCTCACGGA
CACAATACACACAGTCTTTGTATGCAGGAAACAGGTCTTGCAACTCTTCGGGTAGTTGGT
CGTGTGGCAGCGGAGAGGTGGCCAGCAGCAGAGTTTTGTCTCCTGCGGCACCGCTGCGGC
ACAGGTGCAGCAGCAGCGATGCGCCCGCACTAGTACCGCTAACCGCACCGGCCGCAGCGC
CCGCGAGCGACGCCCAAACCGAACTAATGTCACGTATGAACAGAATGCAGCCGCGATCCG
CACGACGACATTCTGAAAATACCGATATTAGCGCTTGCTCTTGAGTGAAAGTGTGAGCCG
AGTGCAGAGTTGACATGCTGAGCTCCTTCACAGTGCAATGTTCCAGCTGCGCCAACAGCG
CCGGCGCCAGCTGACTCTCGGAGCACTCGCCGCTTATTAACAGCACGCTTGTGCAGCTAT
CACCGGACCTTATTGTATTGGAGAACGGTATATCGGATGACGGTGAGTGCAACGGGAACA
CTGTACGCAGTATTTGTTCGGCGGCCTGCACCTGCGCCTGCAGGAGAGGCGCGCAGTGCT
GGGGCAGCTTCCGAGCCGCCAGCGGGTTGGTGCGGGCGCCTGCCGCTACCAGTGACTGCA
TCGCTTCCAGAATATCACGTCTCGTTACCTCCACATTATTCGTATCTATGAGAAGTGCAT
GTTCACTTTCGTACACTTGCGGGTACGTTCTTCTCAACGCCTTCAATACCGCTTCCGAAC
ACAGCGCTTTTATGTCAGAACCTCCGTATCCGCTAGTGAGTTGGGCTATGAGATCCAAGG
TGTCGCCGGTGGGCGGCGGTCGCCAGTGACTCGTGTAGATGTGCAGGATGTCTCGCCTGG
AGGCCGCGTGCGGGAGCGGGAAGTGCAGCTCGCGGTCGAACCGGCCCGCGCGCCGCAGCG
CCGGGTCCACGGCGTCGAGACGATTCGTAGCGCCGATTATCACCACCTCACCCCTGTCAC
ATAAACCGTCCATTTCAGCGAGCAGTGTACCGACAACACTCGTGTGAACTTGCTCCTGTC
TAACGCTTCGAACCGGCGCAAGCGCATCGATTTCATCGAAAAATATTATTGAAGGCTTCA
TTTTATTTGCCTGTTGGAACAGCAGCTTCAGATGCCTCTCACTCTCCCCGACCCACTTCT
TCAAGCAATCCGCTCCCTTCCTTACGAAGAAGGCGACCTTCCTCCCTCCCAGTAACGTAC
ACTCATTGGCTAAAGCTTTCGCCAGTAGAGTCTTCCCAGTACCGGGGGGTCCATGGAACA
GTACTCCCTTCGCCGGACGGGTTTTGAACTTTTGAAATAAATCCGGGTACATCAACGGGA
ATAACACCATCTCGCGTAGACACTTTATATGTTCTTCCAAACCGCCGACCGAAGAAAATC
TCACGCTGCCATCAACCTCAACCGGTTGAATGTCACGCAATGCTCTATCGGTTTTCTTAT
CGTCCATAGACTTCGACTTTTGTCTCCCCTTAGTTTTATTTTTCATAGACACATTAAGAT
CTTCCTCTGTATCCGAACTAGACGTACTGCTGCTGCTACTGCTCAATGGCGACTGAGATC
TAATAGTCTTCCTGCGTAGAATCTTCGGTTTCCTCTCCCTAAGGCTGTATGGCTTCTTTC
TTATTGTGAATGTTTTTGCTCTACCCCGGGTCTCAGCCTGCGCTATCTGCATGAACGCAG
GTTTAGGCTTGCGGGTACGTTTGGACCTGCGCGGCTGCCGACCTAGTGTCAGCTCACTAC
CCCACTCCGACGATGACGTTTCTGACGCAGTTTCCTGACTGTCGTCCTTCTTAGATCTCG
CTTTACGTCGAGGCCGGGTCGTCCGCGCTTGGTTGCTTTCACTGTCTTGTGTTTGTATTG
CATTATCCACTTCAGTCTTAGCATCTCCTTTAACTTCTTCACTTACTTCCATTTTCACAT
CATCTTTTTTATCCTCCATTGTTGGTGGTTTTTTCTCAATGACCGTTTGATTATTTTCCT
CTTCCGAATCGGATTCAGATGCACCGTTCATTTTCTTTGAACTGAATCTTGCAGATGTTC
TCCGCTGCCTCGATAGTTGTGTATCTTCATCTGTGTTAGTTGGAGCGGAGTTGCGTTGAA
TACTTTTGCTAGTGACCCTGGCTTCATCACCCGATGTGAATTCATCAGACGAACTAGATC
CTGGGAAGCCGTAGAGATCCGGATACCCTTTGACCTTTAGATCATTTGTGATCCAACTCT
CATTGAAATTATGGTGTATAAGTTTTCTTTTGCGACAACTCCTTCTTACATCTTGCATTG
GTTTATCTTCACTATCTTCCATATAATTCTTACGCGGCCCTCGATTACGCCGAATCCTTA
GACTTCTGTTAGTAGAGTCGTTATCGTCAGCGAAAAATACTCGAACTTGTCTCGATCTTC
TCGAATACTTTTCAGGTTCTGTATCACTTTCAGGAAACATGATTCGAGGCATTTTAATAG
TGCGCCTTCTTCGACTATATTTAGTTGGCCAGTGTTGAATTTTCCTTGTTACTTTATACT
GACTACTACGGAGCTCTCTTGGTGTCCAATTTGATGCTTCTACAATTTTTTAGGAGTAAT
AGTCAGTTGTAATTCATTTGGACTTCG
(3987 bp)

- SilkBase 1999-2023 -