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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15991_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_and_zinc_finger_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036266 C Cdc48p-Npl4p-Vms1p AAA ATPase complex
GO:0046872 F metal ion binding
GO:0071630 P nuclear protein quality control by the ubiquitin-proteasome system
GO:0072671 P mitochondria-associated ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:1.03 TPM:1.04
ORF EntryO_SariMG1635_5prime_partial:A_SariMG_comp15991_c0_seq2
Sequence
(Nucleotide)
GAAAAGTTTTTAAGCGCTTTTATGAAGTGGTCGAATGTTCTTGTGATTCTGCAGACATCG
GATCATACAAAACTTGAATTTGTCGTATTCAAATGGTTTCTTCGGGAGATAATTACCGCA
GAGGAAGCAACGTTTCTCCTGAGATTTTACCTTATCAGCGTCACAGAGCTCCAGAAACTT
GACAGTCTTCATTTTCTCAATCTGCTTCTCTTTCTCCCGCTGGCGTTTAGCTCGTTTCTG
CTGAGCTTTACGCTCCCTCTCCAGTTCCATTATCTCAGGCGTCAAAGGCCCAGGTATTTG
TGACTTCGCGTAATTGTATCTGTCAGGATACTGCGCCTGGAAGACTCTGAATGCGATTCT
AGTATCGTTGTGGGGCGAAGACGCATACGGAGTCTGCAGCTGATGGTTCTTCACGCACGG
ATCACCCCCCACATTCAGAATCTGAAGGACCATATCCGGTTTAGCAGCAATGGCCGCTTT
ATGCAAAGCCGTATTCCCATCGACCGGGTCCTGTGTATTGCAGACCAGTTCCAAATCAAG
ACCGTCCCAGTTCTCCAATATTGTGTCTAAAGATTCAAACTCCTTATTCAGTATGTGCTT
CCACATCCTTTTGACGCTAGCAGGAATCTTCTGCGGTCCACGTTTAACCGGTGTCGTTTT
CTCTTCTTTCTTTTTCTTTATCCTAATCTCCTTCTCCGGTCGGGCAGGACACTCAGTGTC
CGAGCACTCGGGTGTTGAACAATCGTTCAGTGATAGATCGTTTAGCAGATCTTTTCTAGA
ATTTGTTATAACGCCATTGGAGCTCTGCTCCGACAAGGTCTTTATCCAGTCCGGTGGTGT
TTCCGAATCAATGTAACACGGACCTTCGTCTTCGCTTGATGTAAGTTGTATCGGTAAGTC
ACGGGGTGCTCTCTCCCTTGATTTAGCTCTATCGATGGCTTTATTAGGACTAGGCTTCGT
TGTCTTCTTCGGCTGGTCACTGTTCGTGTTTGAACCTGATTTTGAAACTGATTTCGCAGA
TAACTCTATTAGGACCTTTTGAAACTCCTCCAATGAATCGTAAATCTCAACACTAGAGAC
AACATCTTGCACCCTCTGTACCTCTTTATAACTGGGTTTCCTGGTGGGGAAAGGCAGTAC
CCTCACTCTTTGATCGTCTTTCTTTATGGGTGATGTCTTCCCGAAGAGTGCAGCTTGGTT
CAAGGAACCGACAGCCCGGCACAGAATCATACAGCATCCGTTCAGTTCTTCCGTCCAACT
CGCCATTATATCTTGAACTTGCTGTAAAAATTTAGCCTGGTTCTGTCGTCTCAGGCTAGC
TCCAGCTGTCCTAGGCAGATTACCGTAGTGATCTCGCGTCGCCTGGGCCTGGCCCTGGCC
CCTTCTCACTACGTAAGAGTGATACGTCTTGTGCACCACTGGGGTCCCACTCGCGAATAT
AGCCCCAGCGAAATGCCCACCAGATACCATTAATATCGCCCACCGCTGGAATACTGGGAA
TACCAGACGATTGCAACGCTCAATCCAAGCATCACCGAAACCATCAGTCGATAACTCTTC
CTTTCTGTGGTGTAAAATACATCTGTAAATACAGAAGACCTGCCCAGCGTGATTTGTAAA
AAATGCTTTGCAATGTCTCGTAGCTGCTGCGAACAATTCACTGGGTGGGATATTTTTCCT
CTGTGTGAAATCATCTTCTGAATCACTTCCTGATACACTGGAATCACCTGTACACAATGT
ACAGAATGCTTGTCTAGAGT
(1760 bp)

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