SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15991_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_and_zinc_finger_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036266 C Cdc48p-Npl4p-Vms1p AAA ATPase complex
GO:0046872 F metal ion binding
GO:0071630 P nuclear protein quality control by the ubiquitin-proteasome system
GO:0072671 P mitochondria-associated ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:2.54 TPM:2.54
ORF EntryO_SariMG1632_complete:A_SariMG_comp15991_c0_seq1
Sequence
(Nucleotide)
GAAAAGTTTTTAAGCGCTTTTATGAAGTGGTCGAATGTTCTTGTGATTCTGCAGACATCG
GATCATACAAAACTTGAATTTGTCGTATTCAAATGGTTTCTTCGGGAGATAATTACCGCA
GAGGAAGCAACGTTTCTCCTGAGATTTTACCTTATCAGCGTCACAGAGCTCCAGAAACTT
GACAGTCTTCATTTTCTCAATCTGCTTCTCTTTCTCCCGCTGGCGTTTAGCTCGTTTCTG
CTGAGCTTTACGCTCCCTCTCCAGTTCCATTATCTCAGGCGTCAAAGGCCCAGGTATTTG
TGACTTCGCGTAATTGTATCTGTCAGGATACTGCGCCTGGAAGACTCTGAATGCGATTCT
AGTATCGTTGTGGGGCGAAGACGCATACGGAGTCTGCAGCTGATGGTTCTTCACGCACGG
ATCACCCCCCACATTCAGAATCTGAAGGACCATATCCGGTTTAGCAGCAATGGCCGCTTT
ATGCAAAGCCGTATTCCCATCGACCGGGTCCTGTGTATTGCAGACCAGTTCCAAATCAAG
ACCGTCCCAGTTCTCCAATATTGTGTCTAAAGATTCAAACTCCTTATTCAGTATGTGCTT
CCACATCCTTTTGACGCTAGCAGGAATCTTCTGCGGTCCACGTTTAACCGGTGTCGTTTT
CTCTTCTTTCTTTTTCTTTATCCTAATCTCCTTCTCCGGTCGGGCAGGACACTCAGTGTC
CGAGCACTCGGGTGTTGAACAATCGTTCAGTGATAGATCGTTTAGCAGATCTTTTCTAGA
ATTTGTTATAACGCCATTGGAGCTCTGCTCCGACAAGGTCTTTATCCAGTCCGGTGGTGT
TTCCGAATCAATGTAACACGGACCTTCGTCTTCGCTTGATGTAAGTTGTATCGGTAAGTC
ACGGGGTGCTCTCTCCCTTGATTTAGCTCTATCGATGGCTTTATTAGGACTAGGCTTCGT
TGTCTTCTTCGGCTGGTCACTGTTCGTGTTTGAACCTGATTTTGAAACTGATTTCGCAGA
TAACTCTATTAGGACCTTTTGAAACTCCTCCAATGAATCGTAAATCTCAACACTAGAGAC
AACATCTTGCACCCTCTGTACCTCTTTATAACTGGGTTTCCTGGTGGGGAAAGGCAGTAC
CCTCACTCTTTGATCGTCTTTCTTTATGGGTGATGTCTTCCCGAAGAGTGCAGCTTGGTT
CAAGGAACCGACAGCCCGGCACAGAATCATACAGCATCCGTTCAGTTCTTCCGTCCAACT
CGCCATTATATCTTGAACTTGCTGTAAAAATTTAGCCTGGTTCTGTCGTCTCAGGCTAGC
TCCAGCTGTCCTAGGCAGATTACCGTAGTGATCTCGCGTCGCCTGGGCCTGGCCCTGGCC
CCTTCTCACTACGTAAGAGTGATACGTCTTGTGCACCACTGGGGTCCCACTCGCGAATAT
AGCCCCAGCGAAATGCCCACCAGATACCATTAATATCGCCCACCGCTGGAATACTGGGAA
TACCAGACGATTGCAACGCTCAATCCAAGCATCACCGAAACCATCAGTCGATAACTCTTC
CTTTCTGTGGTGTAAAATACATCTGTAAATACAGAAGACCTGCCCAGCGTGATTTGTAAA
AAATGCTTTGCAATGTCTCGTAGCTGCTGCGAACAATTCACTGGGTGGGATATTTTTCCT
CTGTGTGAAATCATCTTCTGAATCACTTCCTGATACACTGGAATCACCTTGTCTAGAGTT
AAATTGCCCAAGAGTTAGTGCCGGTTTCCCAAATAATTTCCTTTTTAAGTTATGAGTATG
CCAATGATGCTTGTAGTGAGAAATTTGCTCAGCTCTTGTCTCAAATGGGCCCACTCCGCA
ACATGAGCAACAGTTGCCATCAGATGCACCATTGATTGTTAAAGCATTTAAACGTCTGAG
CACCTCTTTCTCGTCAACTATTTGATGAGATTGCGCGAACATGCATGCTGCCACTTTCAT
GCCCTTCAAAAGATTTTCAAAATCATCCCTTTCATATATTTTTATAGTTTTGCATTTCAC
GTTATCTTGTTTAGGCGGCATTGTAATTTTATAATGTGTTTCTTTCAATGAGAGTTAAAG
AAACTTTACGTTACAGATAAGATGTGTACTGGCCACTAAATTGACTAAACCGTCAATACA
AAACATAATATTATGCAATTTACAGGTACCTTACGTATAAA
(2201 bp)

- SilkBase 1999-2023 -