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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15904_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_general_transcription_factor_IIH_subunit_4-like_[Plutella_xylostella]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004003 F DNA helicase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0032508 P DNA duplex unwinding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:14.47 TPM:14.51
ORF EntryO_SariMG1573_complete:A_SariMG_comp15904_c0_seq1
Sequence
(Nucleotide)
TTTTTTTAACTTATCCCAGAGTACCTATTGATTGTTATTTGGAAAAACTATTGTGCTTTT
GATTAAAAGCTATGCGAAAAACAAATAAATAGATCCAAATGTTATTGTTTAAGGTTCTAA
TACATACTAACATCAATTTTGGCTTTTATAAACGATGTCAGAGCCAACAAAATCAAAATC
CTTGAATTTGAATCCATCACCAACTTTACAATGCAAAGATCTACACGAATACTTGAAAAG
CAGATCACCTCAGTTTTTGGAAACTCTCTACAATTATCCTACTATATGTTTAGCTGTATA
TCGGGAATTGCCAGAGTTAGCACGACATTTTGTCATCCGTCTTCTGTTCGTAGAGCAGCC
AGTACCTCAAGCTGTTGTTACATCCTGGGTTTCACAAACATATGCTAAAGAACAAGCGAA
ATCATGTGAAGCATTGTCAGAGCTATCGGTGTGGCAGGAAGCTCCCATACCGGGAGGTAT
GCCAGGTTGGATGCTGGCACAATCCTTTAAAAAGAATTTAAAGGTTGCACTTCTTGGTGG
TGGTCGACCTTGGAGTATGTCATCATCATTGGAACCAGATGGTAAGGCTCGTGATGTAGC
TTTTCTGGATGCGTACGCATTAGAGCGGTGGGAGTGTGTCCTTCACTATATGGTGGGGAG
TGCACAGACTGAGGGTATCAGTGCTGATGCAGTGAGGATACTCCTGCACGCCGGACTCAT
GACCAGGGATGCGGAGGACGGGTCTGCTGTGATCACTCGGGCCGGTTTCCAGTTCCTCCT
GCTGAGCACGGCTAAACAGGTGTGGTTGTTCCTGCAACATTACCTGCACACGGCTGAGAA
ACGTAGTCTCAGTGCTGCCGAGTGCCTGGCTTTTTTGTACCAGCTCAGCTTCAGCACGCT
CGGAAAGGATTACAGCACGGAGGGTATGAGTAACAACATGCTGGTTTTCCTGCAGCATCT
GCGCGAGTTCGGACTCGTCTATCAGCGGAAGCGTAAAGCGGGCAGGTTCTACCCGACCCG
GCTCGCCCTGAACATAACCTGTGTGAAGGAGTGGGAGGGGGAGTCCGCGGTCGCACCGCT
GCAGGCGGGTTCACAGAACCAGGGGTACATAGTGGTCGAGACCAACTACCGCGTGTACGC
GTACACACAGACCAACCTGCAGGTCGCACTGCTCGGACTGTTCACTGAACTAGTCTACAG
GTTCCCGAACCTGGTGGTGGGAGTCTTGACGCGGGAGTCTGTGCGGCAAGCCCTGCGCGG
CGGCATCACGGCTCAGCAGATCGTGCACTACCTCGAGCAGCACTCGCACCCGCAGATGTT
GAAATCTGAGACTGGTGGTATCAGGTCGACATCCGTCCTCCCCCCAACTGTAGTCGATCA
AGTCAGGCTCTGGGAGAGCGAACGGAACAGGTTCACCTACACCGAGGGGGTCGTTTACAA
CCAGTTCCTCTCACAGGCGGACTTTGTGGTGCTGCGAGACTATGCTCGTCAGGCAGGTGT
GCTCACGTGGCACTCGGAGCGCGCCAGGACCATGGTCGTCACCAAACGTGGCCACGACGA
TGTCAAGAAGTTCTGGAAGCGGTACTCGAAAACTTCCTAGCCCTCCCCCTATCTCCTCCT
CTACAGTAATGTACTCCCCTCGTTCCCACTTCAGTGCTTAATTATAAAGAACAAATTTAT
TCAAACCACCGGGCAATTATTTCAAGGAGTCACCAGTATTTTTATTTGTAAATGAGGTTA
ACGAGGTGGCACCATGGTAGTTTTTTTAGATTGTACTACATCCATCACCAGACAAAGTAA
TGTCCCTTTGACACTACACTACAGCCCAGGTTTCTCTCGGTATCTTCCGGTAAAATATTA
TTAAGTGTAAGCAATAATGTTAATATCGGTTTAAGTTAATAACTGTAAATAAAAGTATTT
TTAAAAGTTAAAAAAAAA
(1938 bp)

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