SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15898_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TATA_element_modulatory_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0001675 P acrosome assembly
GO:0001819 P positive regulation of cytokine production
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007286 P spermatid development
GO:0007289 P spermatid nucleus differentiation
GO:0008584 P male gonad development
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0030317 P flagellated sperm motility
GO:0032275 P luteinizing hormone secretion
GO:0033327 P Leydig cell differentiation
GO:0042742 P defense response to bacterium
GO:0043066 P negative regulation of apoptotic process
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0071407 P cellular response to organic cyclic compound
GO:2000845 P positive regulation of testosterone secretion
Transcript
Level		FPKM:5.59 TPM:5.61
ORF EntryO_SariMG1571_3prime_partial:A_SariMG_comp15898_c0_seq1
Sequence
(Nucleotide)
GCCGCGTCAGCGCCGCCAGCGCCTCCTCCGCGGCGACCGCGCCGCCCGCACCGCCGCCGC
CGCCCTCCTCGGAGTGCCAGAGGGAAGCGGGCACCGGGTCCGAGGCGAGGGAGCGCGGCG
GTGAGACATCTCCCCGGCTCGACACCTGCTCCTGCAGTATAGCGTTCCTCTTCCTCTCGA
TGTCGAACGTGTTCCTCTCGAGCAGGAGCCGCAGCTCCGCGGAGTCGGCCCTCTCCCTCA
GCGCGTTCACACTACTCTCGTACTCGCTCTCGACTCTCTCCAACTCGCATGTTTTACTGT
CCAATTGCGATTCCAGGTCTGTGATCCTGGCGAGGTGGTGGTGGCACTGCTCGGTGAGGG
TGCGCAGGGAGCCCTGCGAGTCCTGCAGCAGGCTCTCCGCGGTGGAGAGCCGCCCCACCA
GCGCCTGGTTCTCTTCCCGAGTGAGGCGCTCCCGCTCGGCCGCCTTCGCCAACTCTCTCT
CTACTTCCGCTATGCGGTTGGAGCGTGCGCGGAGCGCGGCCGCGTGCGCCTGCTCCCTCT
CCAGTGCGGCGCGCTGCAGCTGCGCCACCTGCGCGAGCACTGCGGCCGCGCTTACTCCCT
CTGCGCCCTGCGCACACTCTGCCCCGGGGGCGGCGCCCGCGCCCCCGGCGCCCGCCGCCG
CCTCGTGCGCGTCCCGCAGCTCGCGGCGCAAGCTCTCCGTCCGCGAGACCCACCGCCTCT
CCTCGTTGACCATATCAGCTCTCAGCCTGTGCAGTTGGTCCCGCAGCCGGTGGCACTCTG
CCTCAGCGAGCTGGCTCTGCTCCTGCAGCTGCGGCTGCGCGACCCTCAGCCGCTGCAGCT
CCGCGCTGTTCCTCTGGCACTCCTGCAATTCCCTCCTGGCCGCTTCCCAGGATGTCCGGG
AGCTCTCCAGCCGTTCATTACAATCGTCTAGAGCACTTTTTGTCTCAGCAAGCTCCAGCT
CCAATTTCTTGTTGGTTGTTGTGAGTCTATATACAGCTTCTATTTGATTAACTTCCAATT
CTTCTTTAGCTGCCATGGATCTTTTTAATCTCTCCAGTTCGGATGTTTGCTCTGCTATTT
TATCTCTTAAACTTTTGATAACCTGTTCATTATCCTTGTCTTTGACCCTTAATTTCTTTA
TGATATTAGAATGCTGTAACTGTTGCTTTGACAATTTCTCTCCCTCATCCTGCAACTGAG
CTATAACCTCATCTTTTTCTTTTAATACATTCTCAAGTTCCGATGAGATCTTTCTTGATG
ATTCAGATTTTAAGTTGTCCAGTTGCTTTCTTAAATGATCCTTCTCTCTGATTGCTTGTT
GAAACTTTTTCTCCAGAGCTGACATTCGCTGTGTGTATTCTTCAGTAATTGTATTTAAGT
CTCCATTGTCATGTCTTGCTATTAAATTCTCCACTTGTGTTTTTAAATCAGCATTACTCT
CAACAAGTTCTGCATTACTTCTACTAACTTCCATCAACCTATTCTCTCTTGCTTCTAGTA
CCTCTGCCATTTCAGATAACCTTCTAATTAGTTTTTCATTCTCCGATGTATGACTATCAT
CGCTGGCATTGCTTTGTACTGACACTTCAGAAAGTTCTCTGTTATGGCCTCTAATTTTGG
TTACCAAAGATTTACCTAATAATAAATCTACAAGATTAGGAGATGTTGCTCCATCAAATT
TGGAATGTTTGAAAGCATACTTAGCAGGACTACTTCTAAGTCCATTTTCACCATTAGGAC
TAGGTATTATTTCTATATCAGATGATGTAGTGGTTTCCAATTCATCTCCAGACGTATGAC
CTGAAGTTCTGTCTGAACCAATTTTTACTAAATCACTTTTGCTGTCTGAACTTGTTGGGG
ATACGCGTTCTTTAATATTGGTGCCTTTTTGTGAGGATTCACTGCTCTGTGAGCTATTGC
ACTGTAGTTTTCCCACATTAATGAATTCATCAGATTGCTTAGAGTCAGCAGAAACATTCA
CATTGTAAAATGAAGAAGAATCACTAAGTTTATCAATCAGTATATTATCTTCATGTTCTT
CTCTTACTCTTTCTTCAATAACATTTTCTAGATTAATGCTATCATTATCTGCATTTAGAG
TTCGATCAGACAAAGAACCGTCATTTGATGAATTTTCACTCACTTGCATTTTCTGGTGTA
ATAATACTGCTTGTTCTAAGTTGATAGATTCCTTCTCTATGACTTTTCTACTACAGTCTT
TTTTTGGAAATGGTGTTACTTGTTTATCATCTGAATCCAATATAGTTGGTGCTGTGCATT
CTGATATGGAATTATATGACATAGTGTCGTCATCATCATCAGCAACTAAACTAACACTAT
CAGCAGTGTCTGGTTTTTCTGTGTGATCACCGATTGGAGTTGATTTTTTATCACTTACAT
CAAGAGTAATATTTGTGGAGCTACTACTAGTTTTTTCATTTTCACAACTATCAAAACCTA
AACATTCAATAGAACTAGGGCTAATTAAGCTGTCAGGTAAAATTTCCACAGATTCAGAAT
TTGGCTTCTGACCTGTACTACTACTAGACATAGAATGGATTGATGCTTCTGAATCTGGAG
TAGTTTTAAGACTTTGTGACAACACTTCAACAGAATCCGAGCTATTTCTACTAGAAACCA
AAGATAATATATTAGATCTTGTTGATCCTCTTCTTTCATCGACATTTGATTCATCGCTTT
TACTTTTACACTCTCCACTCTCACTTTCAGACATCACTAGTTGACTTTTTGAGAATAGAT
CATCTTGGCTTCCAAATTTAGGGTCCGATATTATATTCATAGACTTCGCTTTCGGTGGTC
GTATTATAGTAGTATCGTTTTTAGGTTGGTCAAAAAAGGAACCGGCAAACGAGCCCCACA
TACCCTGTGAATTGGATTTAGAAGGGCTTTCTGTGACAACTGGTTGCTCTTTGATAGTAC
TGCTCCTCGATTCCGAGGTTGTACTCGGACCCCATGAAACATAATAATCAAGCTCTTTTT
GAGAAGTATTACTCATACCTGAGGCACTTTTGGTTTCATTTTGTAGCGAAGAATCATTCT
GTTCTTCGTCGCCGCTCTCATCCTGGATGTCCAAGGCTTTGTCAATTGTTTTTTGAGCTT
CTTTCAAGGCAGACTTCGCGAGACTCGTCAAACCCGACGTGTCAAACCAATTCATTTTAT
CGAGACATTAGACACCACTAAAGGTACATATCACAGCACAATCGAAACATTTAATTAGAG
CAGGATAAGAAAGTATAGAATATTTGTTATGAAAAATATTCATTCAAAATTTATCACAAC
AAAAGTGACGTGACGTTCCAATTTTGTTTGTGTACACTATACCTAACTACCTAATTTCTA
TGTAAACCAGACCTGCAAGTGCTATTGCCAATATCAGCGATAGTCAAATGAAATTACATT
AATTTAAAAATTTAGTCACATTATTAAACTGTGTAAAATTAATTAGATAACGATTTTTAG
GATTCCACAGGTAATATTT
(3499 bp)

- SilkBase 1999-2023 -