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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15862_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein-like_[Papilio_polytes]
Ontology
GO:0005319 F lipid transporter activity
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006695 P cholesterol biosynthetic process
GO:0007165 P signal transduction
GO:0008144 F obsolete drug binding
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0017137 F small GTPase binding
GO:0030299 P intestinal cholesterol absorption
GO:0030301 P cholesterol transport
GO:0031489 F myosin V binding
GO:0031526 C brush border membrane
GO:0042157 P lipoprotein metabolic process
GO:0042493 P response to xenobiotic stimulus
Transcript
Level		FPKM:25.79 TPM:25.86
ORF EntryO_SariMG1552_3prime_partial:A_SariMG_comp15862_c0_seq1
Sequence
(Nucleotide)
AAATAACCAAACTGAAGAACATTCGGAAATATAATACTTCTATAACTTCTGTGTAAGAAA
ATGCGAGCACAATGATTGGAATGTTTGTAAAAGTAATACCAGTTATAACAGTCGATCCGA
CTTGTTGCAAAGCATCTTGTACTCTCTCGTCTGGCTGTCGCTTGCTTGTTGTGAAAGCGT
ATGCAATATGACTGCAAAACTCGACAGTGATACCAATTGATATGATAAGATTAACGCAAG
ATACTGGATTTAAAGGAATACTCCAAATATACATGACACCCATCATATTAACCACGACCA
AAACACAAGTAAATATAACGGCAAACGAGGTCAAAATATTAAATCCGGATGCAAGAAGAT
TAATTAGTAAAGCACCAATGATACAATAAGAAAGAGACACAAATGTATCACTCCACATTG
TCAAATATTGCTCAAAGAAGACATAGAAAATAGAATAAGGAAAAACTTCGACATCCAGAC
CTGTATGTTTTTGTATAGCAGCTGTTATATTGGCACTAATTTCATATCCATACTTTACAG
CGTTTGTAAAGTCTTGTGAGGAACTGAGAGGTGTATGATAAGCCATAAAATTGCTGTCAT
AAACAGTGGCCCGACCTTCAGAATCAAGCACATAGTTAACAGCATTAGAATAACTTGCCA
GTCCACCTTTATTGCAGACCTGAGTTGGTTCATCTTGTAAAAAGAAAGGTATGTACCTTT
CGAACGCTTCTGTACTGGGTCTCAATCCATTAGCCCATTCATTTCTACTAATTGAACAAG
ACGAACATTCAGCAGAATTGTCAACACTTTGGCAAAATCCATTGTTCGTTGTATTATATT
TGCAGCATGTACCATATAAACTAGTCCAATCGATGAAATCGTCTATCCATGAATTAGAAC
TTTTAGAAATATATGTGATTTCACTATGTTGAGAAGCCAGAAAAACCTGGGTTATCAGTG
AATCATCGTAACAAAGTTGACCACCACAAATAACGTTTTGATGGTTGACATCTGAGAAAT
TTAATCCACTCTTTAAAACAAAATAAACTGGTGGGCCAATACGTAAGAGTTCAGAAACGG
CTTGTAAATATCTGTACACATACGAGTCGGAAGGTAAGGCCATTTCTTGATCTAAGCCTA
TTTTCAGTTGTGGTATGAGGACTGTACTCACTGACACCATTAGCATAAATAAAATAGCAA
CAATAATTCTAACTTTCCAATTTACTATGAATTTTGAGTAGGGCACCATTAATCTTTTTA
TAACACTTTCGTAAGGTTTATTAGAGATCAATGGGTTCACCTTATCAACTACTTTCTTTT
GAATACAACATAAAACATCTATACGATTATCTGCTGCTCTTTTATAATCGATCGATAAAA
TAGCTATAACTGTTGTTATTTGAAAAATAAACAAGAACGTTAAAGATAAGCTGGCGAATA
TAGCGAATGTTAAAACAGCTGGTGAATTTGTAATACTACCAATAGCAAAGCAAGTTATTT
GTGTAACGGACGAAACAAACATTGAGGGGCCTACAGAACTCATCATTTTTTCAAAAACGA
ATCTCTTCTTTTTTTCTTTGCTTAAATTTTCATCATAATCGTCATATTCTTTTAATCTAC
CTTCGATATCATGCAATGTGTTAACCATTAGGAAAACATTATCAATACCAACTGATAACA
CAAAGAAAGGAATAACGTTTATCGCCAACAAAGTAGTGGTAAGGCCAGTATACCCCATTA
CTCCTATAGCACAAACTATAGAAATAACAACTACTAAAATACTTCCTATGGCTACCGTAA
CTTTACTGTCGATAAAACACGTTCTGTAATACCTTATATTACCTAATGATATGGTTACAT
ATAGAAACATTACTAAATAACTTACGGCTATTGGTATGGCTTCTGCAACAGATATACGTC
TTAATTCATCCTCAATTGACCTTTCAGCGCCAAAAGACACTTCGACAAAATCTGATTTCC
AGTTAGCCTCGTAGTCATGCATTAAGTCAATGAACTTTTGTTCCCATTCAAGAACTGGTC
TGAGATCTTCCTCCAAAAGAAAATTTGATATGGGGAAGTTAATTAACAAAGTGTCAGCTC
CTAGAATATTGTCTTTTTCAAATCCACCTAACGCAATTTCAGGTTCTACACCTCCACCCC
ATGAAGCCATACAATTTAACCCGAAATAGTTATTTAAGCAATTTTGTATACGATTCAAAT
ATGTATTTTCGTTTATATCATTTATATCCTCCCCAAGATATATTGTTGCCGACATATAAA
CACACTGATCAAGATATTGGTCACCACCACGATGGCGATTAGGCGCATAACAAACCTCCT
CCAAAGTTACGCCTCTAGTATCTCTACCGATGTTTATAATTGCATCTTCAAGTTTTACTA
ACTCTCTCAAAGCTTCTATCCTAAAAGCAGGACCATAAGTTACGTTTCCAAATTCGAAGG
ATTCTAACTCCCTAAATCGCAGAAATACTTGTGCGGCACGATAAAATGGACCGAACCTAG
AATTAAAAAAATTCAATTCTTGGCGACTACGAGATTCCGGAGGAGACCAAAGTTCTATGG
GATCAGTTGTAAGGTTAATATTTATTGCACCATATAACATTCCAAACACCAACCACGAAG
TTATCATAAAGATCAGCATAGGATTGGCAGCCGAAAATACACCGATTTTTGAAAACAAAA
TTTGAAAAAATCTAGTGAACTTGCTAATTTCTGTTTCTACGATAGGCTTCGTTGTATTAT
TTATCATTCTTCTATATTCTAATATTGTTAAAATTAAAAATATTATTAAACTGATAACAA
AGAACGTAATTCCTATTGAAAACCCGATACAGTTTACGTTAAAAACCGTACATAATTCTG
GAACAACTGGTTCGTTTCCTGTCGGACACATGGCAGAGCAATCAACACAGCTGCAAGGTA
GATCTTCTTCCATGGTTTCGTTGCACCGCGGAGCATAGACGTTCATAGAATCTTCTTCGG
TGGGCCATCTCAAAAAATTTACCTGAACTGGAACCATCGGATTATTTCCTGTATCTCCAG
TGAAACCGAACCAGGCGTCTGCATCACAAACGACAGCATTTCCACACATCATGTTAATAG
CTGGTAATCCGGTCTGAGGAACGATAACACCCGCACAGGAAGCATGCGCTTCTAACATGA
ATGGCTCGTGGACCCTGTAGTCTATTTCGTTAACATATTCTATGTTATTTGCCACTTCTG
TGTACACGTCTACGAAGCGAGACTGATCAGGTGAACAATTCATTTCACATATTTGCCTGA
CAAAGTTTCTGAAGCAGGTAGGACACCGTCCTAGTACGCCTTCAGCTAACATTAAGTTTT
CTGCAAGTTTTAAAATTTGTATCGGTTCGCAACAAGTCAGTATTTGATCATTCGGTATTC
TGTTTCCTTCATCATCGTATACTAAGTGCGGACATCTACGTGCAAGAATCTCTAGTGCTT
CCTGTGCCTCTCCTTGGGGTGTTCCTTCGATGAACGGTTTTGCTTCTTCATCGAAAGGAC
AAGGTTTTGCATGTCCTCCTATTTCGATGCACTCGCCTCGAAAACGACATCTGGCTTTGA
CGCCAAAACACAAGCATAAAAATATAAATGTTATTAAAAGCTTCATTTTGACGAAACACG
GAGTATTTATTTCATATTTATTTCACTTATAAGACCTATCGATTACCGCGAATGTATGCG
AGTGATCGAATCGTCCTCAAGTAGATTCGTGTGAGTTTGTTCAAATTTTATCTGTTTACA
TTACAA
(3786 bp)

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