SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15836_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		caspase-6_[Spodoptera_exigua]
Ontology
GO:0001782 P B cell homeostasis
GO:0004190 F aspartic-type endopeptidase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004861 F cyclin-dependent protein serine/threonine kinase inhibitor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007507 P heart development
GO:0007605 P sensory perception of sound
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0009611 P response to wounding
GO:0010033 P response to organic substance
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030182 P neuron differentiation
GO:0030216 P keratinocyte differentiation
GO:0030218 P erythrocyte differentiation
GO:0030889 P negative regulation of B cell proliferation
GO:0034349 P glial cell apoptotic process
GO:0043029 P T cell homeostasis
GO:0043066 P negative regulation of apoptotic process
GO:0045165 P cell fate commitment
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045786 P negative regulation of cell cycle
GO:0046007 P negative regulation of activated T cell proliferation
GO:0048011 P neurotrophin TRK receptor signaling pathway
GO:0051402 P neuron apoptotic process
GO:0071310 P cellular response to organic substance
GO:0097153 F cysteine-type endopeptidase activity involved in apoptotic process
GO:0097194 P execution phase of apoptosis
GO:0097200 F cysteine-type endopeptidase activity involved in execution phase of apoptosis
Transcript
Level		FPKM:1.21 TPM:1.21
ORF EntryO_SariMG1541_complete:A_SariMG_comp15836_c0_seq1
Sequence
(Nucleotide)
CGAGGAGCAAAATTATGAATTATAATAGAAATGAAATTATCTTAAATACATTTATTAAAT
TAAATAGTAGAAAATAATTGGTACAAACATTTAAACTTATTTAGGTAACTGTATATATAG
ATTTTTTCTTAGTGTGCTCTCAAATAATGGTACTTGGGCACGCTGTAATTTTGTACAAAC
ACTGGTGACTTTATTTGTTACTTTAGTAAAAATTTCATATAAATGTGCTCTTCTCGCATA
CTGTTTTATCATCATACAAAGGAGTTGTATAAACAAAGATCCATATTTTTCATGTCTGTA
TGCTTCATACTCTGGAGCAGTGGCCCAATACACTAGAAAATCTGATTTCCTTAGGTGATA
ATCTGAGGTCCCATCAGCAACTAGCGCACATTCAGATTTATCATCAACTTGACATGCTTG
TATTACGAGGACTTTGGGTACACCTCGTAAGTGTTTAGCTTCATCAGAATCTAATAAGTG
TTGTATGTCTTCGACTTTGATCTTGACTGAATCAGCAGCATACACATGACCTCTGACTCC
ATGAGACAGAATACATAACATAAAAACACTATCATTTTTATTGACACTTTTAATTGTTTT
TTTAATGCATTCAATCATTTCTTTATGATCTAAATCAGAATAGCTATAAACTGTAAAACT
TAAGTCTGTCATAGTTTTTTCCAAAAGCAATTTATCAGCTGTAGAACCCAAACGCGGATC
CAGGGAATCTTTCTGATTATAACTCTCTATACTATACTTTGATGGAAAGAAATTTTCTTG
GTTTATTATTAAACAAATGCCAATTTTCTTGGGATCTTTGATTTTGTATCCATCTTTAAA
CAAATTTGTAGTATCAGACTTCAAATTTTCATCAGACAAATGATCCAAATTTAAATCTCC
AAATTTGGACAACATATCTTGAAAATTTGTATTATCAAATTTATCATTAATATTATCAAC
ACCTGGTTCCTCAGAAAACATAGAAGAATCTTCAACTACTTGAGAGGCACTTTGAACATC
TGTAACTTTGTTATCTGATTTATCCTGTAAATCTTTTAGCTCCATAGCAATATTCCTTAA
ACCAGAAAGATTTGACATGATCCTCACTAATTTCTCTACATTTATTTCAGAACTAAGTTT
TTTTTTTTCATGTGAAACATAATTTACTTTAATGAATTTTTGACACATCAGCTCTAAAAA
TATCAATTCACAGACATCATGTTCTCCTACTTCAACATTGTAGGATTTTAGAGATCTTTT
TAACTTTCCAAGATTATCAGATGTCATATTTTCACAGGCTTTGTACAACAATTTCCTTAA
AGGATTTATATGCATACTAAAGGTTGTCACATCTGATTGGTAATATCTTTTCATAGTGGG
TACATGTAGTCCAAGCCTTCTTACAATATTGTACAGTTGACATATTAGTAGTGCTTCTAT
GAATTCGTGTTTCCATGTTGATCTAGCTTTAGCATGTTGGTACCATTCGTGCAGCAAGTT
CAAGTTAGTGCCCGTAGCATCCTTAGCTATTCGCTGGTATACAATCAACTTTTGTAGTGC
CGTGTCTGGCACCTCGTATAAGAGAAACACTAGCGACGTCATATCGTAAACATTATCTTG
CAATTCCCTATCTATTGCAGAAATAGCATCCACATTTATAATATCATTATTACTTATTAG
CTGTTCTGTTGGCAAAGATTGGTGGTAAATAGCGTCCGTTTGCCACATCTTTAAAATAAA
ATTTCAAATAGTTTCTGCTTACAGTTACAGTTTTTGTTAATTTGATTCAGTGCTGGTTTT
A
(1801 bp)

- SilkBase 1999-2023 -