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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15791_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_TRC8_homolog_isoform_X1_[Papilio_machaon]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007418 P ventral midline development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:9.12 TPM:9.15
ORF EntryO_SariMG1501_5prime_partial:A_SariMG_comp15791_c0_seq1
Sequence
(Nucleotide)
ATTAAGTTACTTCAATATATTAAAAGCTATTTACAAATAGCTTTTTGTCATTGTTTAAAG
TAATATTTTTCAAAACAAAAATACCTGAAATTTTCACACAAAATTCACATACATCACCCA
CTGAATCCAATGATTTTATTTCGATTTTAATGCAGTTTATCATTCGTATAAATAAAGAGT
CTGTTGTCGCAACGAGAGCGTCCAATAAAATCAAACCTGCTTTAAAATCTTTAAAATAAA
ACATCAGTTTAAAATGCATCATTAGTACATCTTAATAGAACAAAGTCTTCTTTCGATTTA
CGCACAGGAACACAGGACTAAAATACAAGACAAATCACACTGAAAATTAATTAAAAAAAA
CATTCGTCACGAGACATTTAAAACGTAAATCACAGGTGTACCGATGTGAACCGAAAACAA
AATTTTACCACTCGAGTCGTTTTATACTTTTATTAATGTTTTTTATTCTAAGTGGTAAGC
GTCATCATCCAGCAGTCATCTGACTCCGTCACCGAGGAGAAGGTCTGGTTCCTCCTCGAG
AAGTAAATTCTGATTGTTACTGTTCTCTTCGTTCCCAGCCTCTGAATTGTTATCCTTATT
CGCATCGTTATCTATCTTATACAATATGTCGTGACAGAGTGGACACCTGTCCTGAACGTA
TAGCCACTTTCTCAAACAGACGCCGTGGAAATAGTGGTTGCATCGCGTTATCTTCGCGGA
GTGCATCTCCTGGTAGCATATAGCACAAACATCGTCCAATGTGTTCAACTGGCCGGTCGA
GGCCTCCTTCAATGAGTTTATTTTGTTGACAGCGGTGCGCCTCTTCATGAATACCGACCA
TCCGGACCTCGCTTCGCACCAGATATTAAAGTACGCGTGAATACACATCATCACAGCTCG
AATCGCACCACCAGACTCGAACAGCAGAATCCATGCTCCATTAAAGAAGAGAAAGATACC
GAAGCAGAATTCTATAGAGTTCCCAAAGGCTCGAATGTAGTACACGTAATCATCAAGCTG
CTCCCAGAACGTGCTCCTGTATGCGTCGATTAGGAACAATGAGTATATCATAAGACTGAC
GACAACTTTCACTATGACTTCTACGCTGAAAGCGCTGACGGCCAACAGCCACGTAGAGAT
CGAGTGTTGAGACCATAAGTAAACTAGCAAAGATATTGGAAAGACAATGAGGAATGCGCA
GACCACGAGAGCTCGGACATGTCTGTGTGTGCTCGGATTGTGAGAAGCACTTAACGACAT
TAACATCGGATTCACTATATTGTGCAAAAAGTGTAACAAAGCAGTGAAAAGTAGGCAGAA
ATTCCGACATAATCTCACGAATCTCTTCTCTGGGTTCAACGATGTCAAGCCGGTTTGAAG
AGCGAGTATGTAGAAAAGGATAGCGGATACAGTGCCGATACTTTTGTCTTCCTCCTCATC
C
(1441 bp)

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