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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15591_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase-associated_protein_Rtf1_[Papilio_xuthus]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0007219 P Notch signaling pathway
GO:0016570 P histone modification
GO:0016593 C Cdc73/Paf1 complex
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
Transcript
Level		FPKM:10.04 TPM:10.07
ORF EntryO_SariMG1354_complete:A_SariMG_comp15591_c0_seq1
Sequence
(Nucleotide)
GTCGACTTCGAGAATCGAGAAGGAAAAAAGCTAACGTATTTTTGCATCATTTCTACTTTA
GAATATTTCCAAAATGGCTAAAAGAAAGAATAAACCGTTGATTGATTCCGACTCTAGCAG
TGAGTGCTCAGATTTAGATTCACAATTCCTGAACTTGGCAAAGAAAAAGAAAAAAGGTGA
TTCACCTCCTCCTAACAAATCAAAAGGTAGATCTGATAGATCATCAGGAAGTGAATCGGA
CTGGGATGATGATGATAAGAAGAACTCCAAATCGTCATCGTCGTCAGATTCTGGTTCAGA
AAGTGACGCGAGAAGCGATACATCGAAGAAGAAAGAAGAGCCTCGGAACACTAGAAAGAC
TTCATCAGACCACTCTGATGATAATAGGAAAAGGCCGGAACCTAGAAAAAGTACAGAAAG
TGTCGCATCGGAGAAAAAAAGAGACGTTTACAGTGAACCTGAAGAAGGTGAAGTCTCGTC
ACATTCATCGGATAATGATTCGATCGATTCCGCAGAGGAATTCGACGATGGGTACGATGA
GAATCTTATGGGGGACGAGGAAGACAGAGCTCGGCTTGCGGCTTTGTCCGAGAAAGAGAG
AGAACAGGAAATATTCAAACGTATTGAGAGGAGAGATCTCATGAAAACAAGGTGGGAGAT
TGAACGTAAACTCCGTCTGGCTCGTCGGTCGGCGGCGGAGAGATCAGCCTCGCCGGGGGA
GGTCGCCAGGAGGCGAGAGGCCCGGAGGAGGAGGAGAGCCCTGCGCCTGCAGCGGCAGAG
GGAGCGGCAGGCGAGACCCCCCACTCCTCAACGGGAGAGGGAGGTTCCTAAACAGGCGGA
ACCCCTCGTAGAGGAATCAAAGGAACCTGAGGAGGAGAAAGAATTACCGGCTCCCAGTCC
AGGGGAAATATTGGATGACCCCAAAGATGCAGAAGAATCGGAGCGGTCCGCGTCACCGTT
GTTTGGGGCTAAGACCGAAAGGAAGAGGAACGTCGATGACAGGAGGCAGAACGCAATGGC
GGCGCTGAGGGCGCAGCGCGACGCGAAGGCGACCAGGGTGGAGCACTTCAAACAGAAGAA
ACGTCTCGAAGAAGAGAAGAACAAGGACAAAGACGACGAAGACGACGCCGACGCTGAAAT
AATCGGCGGCACAAGCAAACAGAGCGTTAAGCTAAAAGCCTCGGACATTTATTCCGACGA
TTCCGGTTCAGAATCGGAAGACAACAAATCGGGTCGTCGAAGTCCGTCAAATTGCTCGTC
ATCATTCGCCGAGGAAGAAGAGAAGAAGAGAGAGGAAGTAGAGATCAAATACGCCGATAC
GAAAGAACAAATCAACAAACTTAGATTAAGCAGGTTTAAGTTAGAGAGGCTCGTGCATTT
GCCGTTTTTCGCGCGCGTAGTCACAGGGTGCTTCGTTCGCATCGGAATCGGGAATAATAA
CGGGAATCCCGTATACAGGGTGGCGGAAATAGTAGACGTATACGAAACGGCCAAAGTGTA
CAACTTGGGCAATACGAGGACAAACAAGGGTTTCAAGTTGAGACACGGCACACAGGACAG
GGTATTCCGATTGGAATTCGTCAGTAATCAGGAATTCTCGGATACCGAATTCCAGAAGTG
GTACAAAGCTATAAAGGACGCCAATAAGAAGCCGCCGACTATGGAGTTCGTCAGGAGCAA
GATCAGCGAGGTCAAGGACGCGCTCATGTACGAGTTCAAGGAGGAAGACGTCGAGAAGAT
CGTAGCGGAGAAGGATAGGTTCAGATCGCATCCGACGAACTATGCGATGAAGAAGACACA
ACTAATGAAGGAAAGAGACGTCGCACAGTTGCGAGGCGACGAGGAACTAGTGATGGATCT
GAACTCGAAGATCCAGGAGTTGGAAGACAGGGCGAACCAGCTGGACAAGACCAGGACATC
ATCGATACAGAGCATATCGTATATTAACAACAGGAATAGAAAATTGAACGTGGAAACAGC
GGAGAAAGCCATCATGGAGGAGGTGAAAGCGAATAAAGGCAAGAAAACCGATGACCCATT
CACAAGAAGACACACGAAGCCGGTGATGAACTTCAAGTCGCATCAGGGCAACAGGAGTCA
GGAGATGATGAGGAGTGAAGTTGAAGCCGTAGAAGTTCAGATGCAAAAAGTGGAGGAACA
GAAAGCAGTAATGCGGGACCGGCAAGAGAGGGAACGATTAGTTCACCATCAAGACGTGGA
GAAGATGAGGAAAGATAAACCTTCCTCGACTGACAACGCGAGTCTTTACTCGCTTCACGA
TTTTGACATAAACATTGAACTAGATTTACCCGTTGCGAAAGCGATAAACTCCCAGCCGAA
GCAGACGACGACGAAGGTGAAGGAAACGGGGCCGAAACGGTCGCTGAATCTCGAGGAATA
CAAGAAACGACACGGGCTCATATGAGTGTCGTTTTGGACAGTATTATTATGTTCCTGATG
TGTGCTCGCGTGCGGGGACTTAACGTGATTGTAGGCGCGGGGGCCGAATATTCGGTTTTA
CGTGAGGCCGAAAATTCGGTTTCACGTGAGGCCGAAAATTCGCGACCACGTGTGAAAGAA
GGTTCGTTATCGCGTGCAACCGAAGCTTCGATATTAGGCGAGCCCGATGATTTGGTAATG
CGAGGACGAAAATGCATATTATGCAAAATGTTGGTTTACATGCGCTTCTGAGGGTTCGAT
ATCACGCGTTGTCGAAGGTCCGGATTCGGTCGCTGTAAATATACTGTGATGCCGATATTC
GGCTGCGACGCTTATTCAGCTTTGCTGATTTTCGGTTTTAATGTACACCGTCGACGGTTC
CCGATGCGGACAACAAGTCGACAAGACTTATATATAATTTATCATTTAATTTTCCGACAA
TTTTTTATTTCTTAATTCCCGATTATA
(2907 bp)

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