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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15572_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_sly1_homolog_[Amyelois_transitella]
Ontology
GO:0000149 F SNARE binding
GO:0000902 P cell morphogenesis
GO:0001666 P response to hypoxia
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005798 C Golgi-associated vesicle
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0006909 P phagocytosis
GO:0009636 P response to toxic substance
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017119 C Golgi transport complex
GO:0019905 F syntaxin binding
GO:0022008 P neurogenesis
GO:0031201 C SNARE complex
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
Transcript
Level		FPKM:11.20 TPM:11.23
ORF EntryO_SariMG1344_3prime_partial:A_SariMG_comp15572_c0_seq1
Sequence
(Nucleotide)
GCAATGTTATTTATTGAAAACTAGTGAATTTTCTGATTACTTATCCATAAGTATATTTAA
AATTAAAGGGTTGAATGAAAGAAAGAATAAAACAAAATGACAACCTTACGAGAGCGACAA
TTAAATGCCCTGAAGCAAATGCTTAATTTGAATCAGACTTTAACAAAGAATATGGCTAAC
GAGCCTGTTTGGAAAGTATTGATTTATGACAGAGTTGGCCAAGATATAATTTCTCCCTTG
GTATCAATCAAAGAGCTTCGTGAACTAGGCGTTACTCTTCATGTACAGCTTCATTCAGAT
AGAGATCCTATACCAGAAGTTCCAGCAGTATACTTTTGTGCACCTACTGAGGAAAACCTA
GGCCGAATATGTCAAGATTTAGACAATGGCATCTATGATCAATATCACCTGAACTTCATT
TCTCCTATAACACGTCAGAAACTTGAAGATCTAGCTGCCTCTGCTATTCAATCAAATTCA
GCTATAAACATTCACAAAGTTTATGATCAATATTTGAACTTTATATGTTTAGAAGATGAT
CTGTTTATTATGAAACATCAGCAATCAGATGCATTGTCATATTATGCTATAAACAAAGGT
GACACAAAAGACACTGAAATGGAAGTTATAATGGACAATATAGTGGAAAGTTTATTCTCT
GTATTTGTGACTTTAGGCAATGTTCCTATAATACGAAGTAGTAAAGGTAATGCCGCAGAA
ATGGTTGCCAAAAAATTGGATAAAAAGTTAAGGGAAAACCTCTGGGATGCCAGAAACAAT
TTATTTCATGGCAACACAGGGCAAGCCGGATCATTTAGCTTCACCAGACCAATGTTGATT
TTATTGGACAGAAATATTGATATGGCGACACCATTACATCACACATGGACATACCAAGCA
TTGGCTCATGATGTACTAGATTTATCACTGAATAGAGCTGTAGTACCAGAGAACACCGGA
GCAGTACTATCAGAAGAAAAACCAAAAACACGATTATGTGATTTAGACTCGAAGGACCCG
TTATGGTCAGAACACAAAAGCAGTCCATTCCCAACAGTCGCTGAAGCTATTCAAGAAGAT
CTCGATAAATACAGGAGCTCAGAGGCAGAAGTGAAAAAATTAAAAAGTTCCATGGGCTTG
GACGCTGACAGTGACTTGGCTCTCAGCATGGTGAGCGACAACACGCAGAGGCTTACCAGT
GCCGTTAATTCCTTGCCGCAACTTATGGAGAAAAAAAGACTCATTGATATGCACACTACA
ATTGCTACAGCGATTCTAAATGCGATCAAATCGAGAAGACTAGATTCCTTTTTCGAACTG
GAAGAAAAGATAATGAGCAAAAGCAGTGCCGTTGAGAGTAAAACGGTAATGGATCTAATA
ACAGATCCTAGTGCCGGAACTGAGGAGGATAAAATGCGTTTGTTTATCATATATTATTTA
TGTACGTCACAATTACCGGAAGATGAATATAAGAAGTTTGAGAACGCACTCGTGACCGCT
AATTGTGACATCAAACCGATGTCATACATGAAGCGTTGGAAAGGTTTCTCGAAAATGTCA
AGTCAGTATGAAGGCGGCGGTACGAAAACGGTTTCAATGTTTTCCAAGCTGGTCTCGCAA
GGTTCCTCATTCGTTATGGAAGGAGTCAAGAATCTAGTTGTTAAAAAACATAAACTACCG
GTGAGCCGTGTGGTGGAGGGTGCCCTGGGGGGCGGTGGGGGCGCTGGG
(1728 bp)

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