SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15485_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_15381_[Danaus_plexippus]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0005687 C U4 snRNP
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0034709 C methylosome
GO:0034715 C pICln-Sm protein complex
GO:0034719 C SMN-Sm protein complex
GO:0071208 F histone pre-mRNA DCP binding
Transcript
Level		FPKM:24.07 TPM:24.14
ORF EntryO_SariMG1293_complete:A_SariMG_comp15485_c0_seq1
Sequence
(Nucleotide)
TTGCGAAGTTGTTCGTTTGTTTGTTTTTAGCTTTTTGTAAATTTTATCCAAGAACATCTT
AGTCTTATAAACCTGATATTTAGTATACTTTTATTAGAGTGTAAAGCATTCATTTGCCAT
GTCGATCGGTGTTCCTATTAAAGTACTTCACGAAGCGGAAGGTCATGTAGTGACCTGCGA
AACAAATACCGGCGAAGTATACAGAGGAAAACTCATAGAAGCTGAAGATAATATGAATTG
TCAAATGACGCTTGTGACTGTTACGTATCGAGATGGACGCGTTGCGCAATTGGAGAATGT
GTATATACGGGGCTCCAAAATCAGGTTCCTTATTTTGCCGGACATGTTGAAGAACGCGCC
AATGTTCAAACGACAAGGAAACAAACCGACCGCAGGACGCGGTAAGAGTGCAATATTACG
AGCCCAAGCTGCTGGTAGGGGGAGACCGGGCGGGAGAGGCGGGGGGCATAGGGGCAGCTG
GCAGGGTGGATCCGGTCCTTCGCGACGTTAGCTGTCTCACATTGTACCTAATATTATTCT
AGATTAAGATGATGTCTCGTTGTATGTCAATGTTTTACTTTGATTTTTATATAACTAAAT
AAGTGAATATAACTTGTATATGGGCTGAATACAAATTGTTTTCGTATTTGAAACATGTGT
GCATGTTATTATACCTACTGTTTTAGTGATTTTAGTGTTGTAACTTGGACTCAACAATTA
AATAACCTTAAAAACTGGTGTGACGACAGTAATTAATTGTCAAACCCATTCTTACCCTAT
TCTTGGACTTTATTAACATCAAATTAAGTGTAATATCATGAATTTGAGTATAAAGTGAAA
AGAATAAATTACCTTCTTACAGTGTGCGTTTCATTATATTATAGACATTTTGTAAGTTTT
AGCAATGTAGTAATAGTGATTGATAATGCTTATACATAGAATAATATTTAGTTGAAATTT
AATATGTTGATGACCCATAACAATGAGACAGTAGAA
(996 bp)

- SilkBase 1999-2023 -