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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15281_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		ligatin_[Danaus_plexippus]
Ontology
GO:0001731 P formation of translation preinitiation complex
GO:0002192 P IRES-dependent translational initiation of linear mRNA
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0022627 C cytosolic small ribosomal subunit
GO:0032790 P ribosome disassembly
Transcript
Level		FPKM:4.32 TPM:4.33
ORF EntryO_SariMG1170_complete:A_SariMG_comp15281_c0_seq1
Sequence
(Nucleotide)
CTTCAAAAATCTATTACTCAATGAAAAGGCATTAAGATTATAATTAAATACCATACTATA
AGATTATAATTAATTACAATACCGCTTTATAACCATGTTATTCGCTAAGCCGTACAAGCT
AAAATCAAACAATTCGTTGAAAAATTCAGAAAAAAAGCATTTAGCACAACGTTTGCAAGA
TGAGTTTCCTTCAATTGCTGAGGAGAAAATTAAAGAAATTGTGCCGGCAAAATCAAACTG
CATATGTATGAAGTTAATACTGTGTTCTGGTACGATAGTCAATGTTTACGCAGTCGATGG
TATTCCTATGGTAATAGAAACACAAGAAGGCCTGGTACCTACCGTGTGTGCTTTATGGAA
AATTTCAGATTTAATTCCAACTATTGCTATACACAGCCCAGTGTTACCTAAGGTTCAAGG
TGGTGCTCCATTATATCTCCCTGGTGTACATTTTCCACCAGGAGGTGCTGGGTTTCCTAT
ATTTCAACGAGGGGCTATAATAGGTGTACATACTGTGGACAACATAGCTGCTGGGATTAT
TGGTAGAGCTACAATGTCTAGTGCTGATATGCTACTTAGAGCAGCCGGAGTCTGTCTAGA
CACCTTACATGTGTATGGTGATCAGCTGTGTAAAGATTCCAAATTTGGTAAGATTGAGAG
GCCAAAACTGGGACCTTATTCTCATGGATATGTTGACGGGGAAGATAATATTTCTGCTGG
TATCCAAGAGTTAATCATTCAACCTCAAGTGAGAGATGAATGGCCGAATCTTGGCAAACC
AAACCCCAAACCAGATCCAGCTCCGGTGCCAAATGAACCCAGAATTATACCAGACACTAT
TATACAGACCAATCAAAATGACGACAGTCAAAATCAATCTGATAATATCATTGTTACAGA
TTCCCAGTCTGAGTCGGACATACCGACAGATATGGATGGTCTCCTCAGGTGGTGTTTGTT
GTCATTCCTGAAACTGGAAGGCAAGAGCGTGGAGCTGCCAATCAAGACCAGTTTATTATA
CAGAAACCATATGATCCCGCTCTGCCCTCCGGAACTCACGTTAGATGTTAAGAAATCAAC
ATACAAGAAAGTGGGAAAGTTTCTAGAAGCCATGCAAAAGGAAGGGCTGATCGAGGTTCG
CGAGGTGGAGAAGGGCGTCGACGCTGTGACAGCTGTCAGCGTCGCACACGCGGCCGTGCG
CGCGCACCGCGCCCCCGCCCCTAGCGCCCCCGGGGTCCGTCCCCAGCGCGCAGACTCCGC
CCCCGGGGACGAGTACGCCCCGCCCGCCGTGCGCGAGCTCCACTGCGTGACGGCCGCCGT
CACCGACCTCTTCGCACCCATCAAGAAAGGCACAGCTATAACTGCGTCCGAGGTCCGGAG
CAGACTAACAGACTATGTGAAGAAACACAATCTGAACTCGGCGCAGCTGAAAGGCGCCGT
CACACTCGACGCTCTGCTCGCCAAAATACTTGGAAAACAAGAACAGGAGAACATAAAGTG
GGATGCACTGATGTCAGGAGTCCAGGACAAGATGACAGCAAGCACAGAGATGCGGTTCTC
AGACGGGACTCACAAACTAGTCAAGACTAAACTGGAACCTATCAAAATGCAAGTTGCTAC
CAGGAGCGGTAACAAAAAGGTTACACTAGTATCAAACTTGGAATCATTTGGGTTCAGTCT
GGCTGGACTGAGCCAAACCTGTCAGCGAGGAGTAGCGGCTTCCTGCACCATCACCAGATC
ACCTGGCGCTAAGTACGACCAACTGCTTCTGCAGGGAGACCAGACACATTTTGTGGCGAA
ACTCCTCATTGAAAAGTATGGACTACCAAAAAAGTTTGTTGAAGGAGCAGATAAAGCTCT
GAACAAAAAGAAGAATTAAAAAAATCCAAACGCGTAAGGGAAGTGTTGTAAAATATATTT
ATAGTGAACCTGTATATACAACACAATTATTACAGTGAGTGTTGAAACAAATTCCGAGGA
ACCTTTAAATCTGCAGCCTGGATAACTGCTAGTGATTTGTATTATTGAATTTTAAGTTTA
AAGATTTAATATCACATAAGAAGACTACAAGGACATTTATGTACTTTAGTTCTAGAATTT
ATTTTAATGAATAAATTAACACAGAAATAACTCCCAGTTTGTAAAACATAATTAGTAATA
AAAAATAATATACCTATATGAAGGCATGTGAGTGTCATAATTAAATAAAACTCATAAGGA
G
(2221 bp)

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