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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15217_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.59 TPM:3.60
ORF EntryO_SariMG1132_5prime_partial:A_SariMG_comp15217_c0_seq1
Sequence
(Nucleotide)
GTAAAGCGGGGTATTACTGTATTCTTAAAGAAACGTGCTCTTTGGTAAATCGAAGGCGTT
TACAAAATCATCAAGTGTGCAGCAATATGTGAATCCATCTTTAGGTATCAACCACAACAT
TGCATCTCCGTTGCAAATATTTTTGCAAAGTATATGCTCGTCCTTTGGCGTCGGTTCGTT
TACGTAAACGACCGCTATATGACCTTCACTACCCTTAATAACCTTCCATAAATATCTCGG
TATTTTTCCTTCGTTTCTCTGCGTATATTTACTCGCTCCTGACCACACAGATAGTGTTGG
TTCAATGTCGAGTTGGTTCCTCACGGAATCTTCGATCTCTGACCACGAAGTCCTCTCAGT
GCACGGCCGCCATATTGGAACAGCATTGAGATAATCAACGTAAGTGCTAGTCTGCATTGG
ACCAAAGGTGACGTCTGTCGCGTTAACCAATTGCCCCTTATAATAGCAACATGAAGCGGC
ACTATCGACACATGTATACTCTTTATCTCGCCCCCCACTCTTAACTCCAGGATACTCGGT
CCATTTTAGCCAACCACCATTGATCCGGTATCTTGCACTGGTCAAAGTCGTTTGCGTGTA
CAGGGGTACGTCATCTTGCGTGTCCAAGCAGACCTCGTAAGCCTCGATAAAAGTGTTTCC
ATTGAAGCCGACACGGACAGTTTCACTGTTTTCCGTTAAACAGCGTTCGCCCGTCTTCTT
TACAACCGGCACGACTTGTCTGTCGCAGTGGAAATCCGAATACTTGTAAGATTTCCCTTC
AAATGAGAAATCGTTTTTACGTTCACAGGTGACGTCGATTTCACTCTTCCCGGGAAACTT
TTGGAAAGTGCTCGGGCACAAGAGTTTTAACTTTTCCCCGGAGTCGAAGTTCAGGTATTG
ATTTGTAGTTTGATATGTGGGCCAAGTGGATGACTCCGTTAGAATTACTGGAGTGTTGAT
TACTGACTCGACGTCTCTGTTTACTAGACAGCCTTCTGAAGAGACGCTAAAAGTTTTCCC
CAAGGTACCGTGGACATTATTAACTCGGCAAGAATATTCTCCCCAATCAAATATGTCAAG
TCTGTAATTATCTCTCGCTGAATCTAAGGGTTTACCGTTATGCAACCATTCGACCGTTGC
AAATGGCTTTGCAGAAACTTCACAGTTCAAATCACCTTTCCCTTTCCAATCACTGATAGC
GGAGTCGGTGAGTATTGTGAAATTCGGTTCATATCCAACATCAACAAGAATTGTGTCCGA
ATTCGAACCGAATCTGTTGCTGACGCGACACGTGTAGTTTCCGTCCATCCATACGGTTGC
ATTCACAAAATGCAGATACGATCCCGTGACGTTCATTAAATTTCCATTCATATACCATCT
AACTGAATCCGTTGCCGTGTGAGGTAGAGGACACTTAATCTTTTCTGATTTTCCTTGTAA
GATGTACACTATATGAACATTTTCATAATCGACTTCCTCTGTAACAGTGACATTGAAGGG
CCTTGTATCTGAACCGAATACATTTCTAGCTGTGCACCAGTACGTCTTTGAATCTGTTAA
AACTGGATTGTTAATGATAAGAGCTCCATCTTCGATAGAATATTTTTGGTCTTGGACTAT
AGCTTCCCCGTCTTTGCTATTGCTCCATTTGATATCTGGTTTCGGATATCCAGTTACGTT
ACACGGGATTCTCAGAGCAACATCTCCTATTAAACCTTTAAATGTGTTAATTCTATTATT
GATCCTTGCCGGAGCTTCAACAATTAGTTCTGTGGTTATCTCATCGCTGCCCAATACATT
TGTAGCGATACACTTGTAAATTCCGGCATCCGATAACACAGCACTCTTAATATGTAACTG
CTCTACCACATTTGATAAACTTTGGAATTTATCCATTTCATTGCTCTTAAAATACCAAGC
GACCGTAGGTTTTGGAACACCATTTAATATAGCGTTAGATATAGTAGCTGGTGACGTTTC
TCTCACAATCAAAGGATTTACAGATTTCGCCAGTTTAGGTTTCGACAGATTATTTATGTC
GAGATTAACATCGTAGCTTTGGCTCTCGTTTTCATCGGATATTAAAGTAACAGTGCATCT
ATATTTGCCAATTAGATCCAAATCCATGTAATTAACTATCAACGCTGATTCATTTGAAGA
CAGGTAATATTTGCCAGATGGCTTTAGGGGTTCCATATTACCTTCTCCCGGTTTAAAGAA
CCATTTAATCTTAACGGGCAACTCTGATTCTACCGCACATGGTATAATATAAGATTTTCC
ATATTTTAAGCTCTTTATCTCTTCTCGTAGACCATGCCTTTGGAAAGGAGATAAAACCTT
CACATCAATAGCTTCAACCGTGGCGCCACGAGAATTCAAAGAATGACAGTAATATCTTCT
CGAATCCTTTATGTTATTTAGATTAAGCGTACTAATGTATTCCAAATTCTTGTTTCCCGT
ATCGCTTTGATAATACCGAATAGAAGATGGGATTACCACATTGTCCTCATCTCGCCATTC
TACTTTTGCTTCAGGTTTGGCAGACACATGACAGCTCACTAGTATACTGCTACCATATTT
TGCAGTGATCTTTGATCCTTTATCTATTACTACTCTAGGTTTGGTTGTAACAATGAGTTC
AGTGAAATGCTCATCTCGACCGGCCCCGTTATCGGCGATACATTTATATTTACGAGATTG
TGATAAATTGTTTACATTCACAATAAGCTCGTCATTATTGCCCGGTAAAGGTTCATATGT
ACCGGACGAATCGGTTTCAACATACCAAGATATTGTAGGGTTCGGTTTAGCTGCGAGAAT
TTTGCACGATATTGAGACAGTACTGGCGTTAGTTGTTACTACTTCTGTTTGAGATTTATC
GATGACTGGCGTTATTGTTATGATTTTCGGCTGTACAGGCGTCTTAGAAACTCTTCGTAT
GGTTTGACCATTATGCTTTAACCTTCCTTTGATCGCAATTTTAATCATATGGTTAGGAGA
TGAAAACTCATCTGTCGTAAAGAAATTACCATAGACCGGATGCAAAGGTAACTCCATTAA
GACATTTTCGTTCATGTCCAAAATTTGTGCCGTCTCTATAATCACTTCATTATCTGGATC
CGTAACAGTTACTGATAGAAAGTTCATGTCATCTGCTATGGGTTGTGTAACTGTTTTATC
TGGTCCGTTAGGCATTACAACGGAAAATCCGTGTTGGAACGAGAAATCAGTCCTTCCGGT
GATCACTATAGATGTGGAGCTATGGCCTGAAACTAGTACTGAATATTGTCCAGATACAAG
GTCCGTCAACTCAACTGCCTTGGAATCGTCAGTCCACATTAGAGTGTTCATATGAACAGA
TGTACTGGGTGCACGTGCTTGAAGCTCCACATGCACACCAGATGTTGTGATAAGAACGCT
TTTAACTTTGTCGTCGACGGCGAATGGTATATTAGTAAGCCGGAACGGGGGTATAATTCT
TGAAGTCAGTAAGCTCTTCTTTCCCCGAATCTTAGCTCTGATCACTTCGATCATCGTGGT
AACTTCGTTTTTATTAATTTTGAATACTTGACCGGAACACGACGCGGCAATTTCGTAGTA
CACCGCAACCTTTTGACTTGTAGGTGCAAAACAATCACCCGTAAGAACAAATACTACCTG
ACTCTGTTTACTCTGGCAGAGCTCAATGACGGAGCCGTAGTCCAAATAATCTTTAGCCGA
GGCATCTGTAAAAACGTACACGTACGAACCAGGTTCACTTTCCTCCAGGGCACGTTTGAT
TCCTCCCATCGCCATTTCAGGACAATCTCTGTTAACATCGTTATGTGCCCGCAGTGAATA
TACGGACTTTTTAAAGTTTTTACGATCACTGGTTTTATCTACAAGGGTTACAACTGGATC
ATTGAATGATACGAGCACGAACTCTTTAATTTCGCTAGATTTCTCCTCCAACGCTACATC
CATAATCTGGTCTACCTGGCTCTTGACCTGATCTATATCGTCCCACATAGATAGAGTATC
GTCGATAACGAACGTCAAACTGCTCGTACCCTGGCATGATGACTTTAACACTTTAACAAG
CAACAGGAATATAATTGAATATTTGCGTAGAAACATTTTGTGCGCTA
(4127 bp)

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