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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp15109_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_39_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:13.05 TPM:13.09
ORF EntryO_SariMG1065_complete:A_SariMG_comp15109_c0_seq2
Sequence
(Nucleotide)
GTGACATTTAGGTGTTTTCTCTCGTAAATGTCTGTATGTTTTGAAGCTGCTAGGGTATAC
ATATACCCTAACTTAAATAACCAAAGCTCGATATTGTATAGACGATCGAATTAATAATTT
GAATGGCAGATTCTAAAACAGACGTGAGTGAAACTTTGGGTTGTATGATAATTACAGAAA
CAAATATACACAGCAGTTCAATTCCGGAAGAACTATATCTATTTGATTTTACAAAAATTG
ATGATGTGGACGCATGGCAAGAACAATCGGATACAGTACGTGATGTGGGCATGTCTAAAG
CTTTGCTTGTAATACATAAAAATATTGGATTTAGAAGAGCCATATTTTTTGCCTTGTTGA
ACCCTCAATTGAATGGAGCTGGATTTGCTGGAATTCGATCTCTTCGTACATATAATCTAA
CAGGTTATACAAAATTACAAATACAATGTAGAGGTCAAGGTGTTAACAATGGATTCAAAG
TTATTCTCAGACACAAAGGATTAAATGATGAACCTAATTATTCATTTGAACAGTATTTCC
AGGCGCCTAAGGATGAATTTTCAATTAGAGATTTGAAGTTTTCAGAGTTTAAAGCTTATT
ATAGAGGTAAAAGAGTTAATAATAACGAAACTCTTGATTTATCTCAGATCACAAGCTTTG
GTATACAAATGTATGGTGGCGTATATCAACCTGTCAAACAAAAAGGACCTGCTGCTTTAG
AGATTGATTGGATAAAAGCTGTATAGTAAAATAAATTGGATGAAAATTAAATATTTCATC
ATATTTCCCAAAACTATGAAAATAAAGGTTTCTACTTAACTGAACCCAGTCACCTAGAAA
TGATTTGAAATTGATAAATATTTCATTTACATGACTCATATTTGTAATCAAAGACAATTA
AAATAGCAGGCTTTATTTAAAACAATATTATAATATAATAAAATGAAATTACAGTATGGT
TTATTTTTTTATTTTATTTATGATATTGCTAGAATTATGTATTTCATATACAAAACAGTA
CACACTCAAGTTTTCCGTGTCCCACTTTAATATATTGGGTGCATATTTAACGCGTACCCA
AATCGGGTAGTTATCGTTGTCGCGTAGGCAGTAACAATGTGAGTGCTGTCATTGCGTCTG
GGAACAGTGAATGGTAGTTGACGAGTGGTACATATGCCGCCGTGATGACGCGACCCGCAA
ACCACCGTCCGTGCAAACTGTTCACCGAGGCTACGGCGGTCGCTATCGTGGGACATTTGC
AGTACACGTTCCCCTGAGGCGACGCTTTATCCACGTAAACGTGTAACACTCCGCCGTGTT
TGTTACACTCACTGATGACGTCATCCCTAATCTCGATATCCCAGCTCGGATTATTCTCAG
AAGCTGGATCAAACATGTTGTTAAGCATAAAACACTGCGTTGCTATGGGAGGCGCCACTT
GCGGTTGTGGATTCACGAGAGCATTGCTACTTCCTATTAATACTGACGCTGCAGCTTGTG
GAATCTGTAAACCTGTTCCTTCTGCAAGCTTGAACATCAGCTGCAAACGGCCTGTCGCTC
CAAGATCGATGCCTGCTCGGTCCAACTCATCCGCATCAAAGCGAGTGCTAGACCCACCAT
CTGTCCGTTCCGTCACATTACCTACTTTCATAGGTCGTCCTGCCAATTCGAAACCGTTCA
GTTGTTCCATTGCTTTCTTAGCATCCGCTGCATGATGGAATGTAAGAAATCCATATCCTT
TACTTTTGCCCGTCTCCGGGTCAGTCATTAATTGTATGTGATCGATTTTCCCAAACGGTT
CAAATATGCCTCGAAGCATATCTTCTGTAATATTAAAATGAAGCGAACCGACATACAATC
TGGTAGGTCCATTACTAGTTTTTGGTGCTAAGTTTGGCAGCGTGTTGCCTACTCTGTTCT
TTTCCGCTTGCGTATGTTGAACAATGATTGGGACACCAAGTAACTTTTGTCCAGTTAATC
CTAATGCCAGTGGCACTGATTCTGCGTCTTTGAATTCGATGTAAGCAATCCCTTTAAATC
TTCTAGTCTTGTTGCATGTAATCATTCTTACATCTCTAACTTTACCAACAGACGAAAAGA
ACTCTTCAAGATCTTTTGCCCTAATTCGTTGAGATAACTGCATACAAAACACAGTCCGTA
AGTCTCTTTCTTCAGGTGGTAAATCTTCTAGTTTTGGTTCAGGTCCTCTTGATTTTGAAC
GGTAATCTTTATGGGCTTCTTTTTCCAGACTCTTATCTTTTTTATGAGAATGTCTGTCAC
GACTACGGTCTCTTTCAAGACTACGTTCTTTATCCTTGCTCCGTCTTTTATCTTTGTCTT
TATCTCGTTCACGATCTTTTTCCTTTTCACGTTCTTTATCTCTGTGTCCGCGATCTTTAT
CCCGATCACGACGTTCACGGTCCCTTTCCTTTTCACGTTCTTTATTTTTCTTATCATCTC
TGTCTCTTGGACGTTGAGAATCTTTATCTCTTGATCTTCTTCTATCTCTTGACCGGCTGC
GTCTTCTACTGCTTTCTTTATCCTTTTCTTTGTGCTTATCGGTGTACTTGTCCGTTCGTT
GCTTTGAAGTGGAAGTGTTATCAAATTTATTATAGGGTGCTTCTAACATAGCCTCTACAT
CAAAATCTTCAGCCATTCTGACTTTCTAGAAAAAGCGCACAAAATAATAATCAATATGGT
TTCACCAAATTCGTGGCCTTTGTAAAAGCCTATAATACCCATGCAAAACAATTATAGGTA
ATCGTCTTGATCCGAAGAAGTGTTTTCACG
(2790 bp)

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