SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMG_comp120917_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TAF5-like_RNA_polymerase_II_p300/CBP-associated_factor-associated_factor_65_kDa_subunit_5L_[Amyelois_transitella]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0043966 P histone H3 acetylation
Transcript
Level		FPKM:2.31 TPM:2.32
ORF EntryO_SariMG29232_complete:A_SariMG_comp120917_c0_seq1
Sequence
(Nucleotide)
TAGAAATCTCGTGAGAATATTATTTGTGTTCCTTGGTTAATATTCTATTACAATAAAAAT
TGTACAACTTGGGATGTCTCTAATGAAAAAAACTAGGAACGATGCAATTAAAGCCGCCGT
AACGTCTTACTTAGAACGCCGAAATTATCCAGACTTAGATGTGTTTGGCAATAACAATTC
CCATAGTCACAGCGCAGAACAAATGGCGGTCGCGACTATTGTACAATGTGAATCAAGTCG
AGCAAACTCTATCTTATTCTCGTGTATTAATAATGATTCTGCACAGTACGATATACAGTA
CACAAGATTAGTTAACTTTATAAAAGAAATCAAAATTGAGAAAGTAAAAAATGAACTCTC
AGGTTTACTGAGCCCTTTACTCTGCCATTTATATTTGGAAATGCTTCGTGGAGGACATGG
AGGCGCAGCACAGATGTTTTTAAAGAGACATTTGACAACATTACCACAAAAAGACTTATC
ATACCACCAACCTATTGATGGTAATTTACCTTCAGCATTATACCGGCCAAACAGCTTAGA
ACAATTGTTTAATTCATTACAAAATGGAACAATAGACAATGAAACTCCAGAAAAAGACTA
TATGAATCAGATACTCGATGACATTGGTTCAATATACACTTTACAAGAAATTGAGGCCAG
ACCATCAATTGCTGCATTCAGATCATGTAAATATGATATTTATTTATCACAAGATGCCCT
GAATATGCTAAAATCTTATTTGGCGAAACATAGCCATGTGTTATTGATACAAGTATTACA
AACATGGTTCCACATTGATATTAATAATGATACAAATAAAAAGAACTCAGAAGATGAAGA
AGAAACCGAAGACTCTGTACATACAACAGTAAATAATTCTAAGGAGAAAGTGACAGACAC
AAATGTGCTTCCATCAGATATATTTGCTAAGTGCAACGGTCACACAGAATACCAATGTGT
CGATGAGGAGGTTTTAGAACTGCAAGAAGCAATAAAGGGTGTAAGAGAATCAATGGCACC
CTTAAAATTATACAAAATAGCTGCACCTGATACACACTTAGTATGTGCCAAAACTGATCC
AAAGTGTAATATATTATGTGGAGGGTTCAGTAATTCTGAAATAAGACTATGGGATCTTGG
ACAAAATAATGTTAGAAGAAGAGCTACTCAGAATATATCTGAAGTGGAATTAGCATGTTA
CATGCCGCTTGAATCTCTACCAGATGATGACTCATTACAAATCGGCGCAGGAGTGCCTCT
CAGGGGTCACTCAGGTCCAGTAAATGCTGTTGGTGTATTCCCGAAAGAGAATTTAGTTTT
ATCAGCCTCACACGATAACACAATGAGAGTCTGGAAACTTACTGATTATTCTTGTGCCGC
TATATACAGGGGTCACAACTATCCCATCTGGTGTATGGATATATCAAAAAGCGGACTCTT
TATAGTGACCGGATCCCATGACCGTACTGCCAAACTGTGGTCACTAAACAGAACGTTCCC
GGTTAGAATATTTGTCGGTCACACATCTGATGTTACGTGTGTGAAATTCCATCCGAACGA
GTCGTACATAGCGGCTGGTGGCGCAGACCGCAGTGTGCGGCTGTGGGCGGTCTGTGACGC
GCGTCTCATGCGTGTACTCTGGGGCCACCGCGATATAGTTAGGACACTGGCTTTCGCACC
TTCAGGCGCTTATTTAGCAAGTTCTGGTGATGATAAAAAAATAAAAGTCTGGGATTTAGC
CGCATGTACGTGTGTACACGAACACCGCGGTCATCATAGTAAGGTCACTGCACTCGATTG
GTCTGCCGTTGGTAAAGCCAGTTTGACAAACAGAGTATTACCTGATCCAAATGATTCTTC
ATTGGAAAATTCATTGTTATGTTCAGCTGGAATGGATGGAATTGTAAAGATGGTATGGGA
TGGTCAGACAAAAACCAAACATGGAACCAATCAAGACATGTTGACCTCTACATATAACAC
AAAGTGTACATATTTAGTAGATGTACAAGTTCATCCAGACTGGGTTGTGGCTATTGGAAC
AAAAAGATAAAACAAATCCATGATTAAATAATGATTTTTCAATGACATTAATGTATAAAT
TGATATTAAAAAAAATTAAATTTCACTCATACTTTTAGAAATCTGAA
(2147 bp)

- SilkBase 1999-2023 -