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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c9956_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_U5_small_nuclear_ribonucleoprotein_200_kDa_helicase_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0007419 P ventral cord development
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:30.24 TPM:29.28
ORF EntryO_SariASG1125_complete:A_SariASG_c9956_g1_i1
Sequence
(Nucleotide)
TGGGGGGCAGGTGGGGGGAGCGCGCAAGGTGATACACCTGGAGGAGCTGGTGTTCGCGGC
CGGGTCGCACTTCATGGCGAACAAGCGCTGCCAGCTGCCGCCCGGATCATTCCGGAAACA
GAGGAAAGGTTACGAGGAAGTCCATGTGCCAGCGCTGAAGCCAAAACCGTTCGACGAAGG
GGAGACTATGACTCCAATAGACAAACTGCCCAAGTACGCTCAACCGGCCTTCGAAGGATT
CAAGACCTTGAACAGGATCCAGAGCCGTATATCGAAAGCCGCTTTGGAGTCGGACGAGAA
CTTGTTAGTTTGCGCCCCGACCGGCGCTGGTAAGACGAACGTGGCGCTGCTGTGCATCCT
CCGGGAACTGGGCAAGCATGTGAACGATGACGGCACCGTCAGCGTCAACGACTTCAAGCT
TATATACGTAGCGCCGATGCGGTCCCTGGTACAGGAGATGGTGGGGAACTTTAGCAAACG
TCTGGCCGTTTACAACATGAAGGTGTCAGAATTGACCGGTGACCATCAGCTCACCAGGGA
ACAGATTGAGGCCACCCAGCTGATCGTCTGCACTCCTGAGAAATGGGACATCATCACCAG
GAAAGGTGGGGAGAGATCGTTCACGAATCTCGTTAGGCTGATCATCATTGACGAGGTCCA
CCTTCTCCATGACGAGCGAGGACCTGTACTCGAAGCGCTGGTAGCGAGGACCCTGAGAAC
AGTGGAGCAAACTCAGGAGAATGTACGCTTGGTCGGTCTCTCGGCGACGTTGCCGAACTA
CACAGACGTCGCCGCTTTCCTACGAGTTAAGCCTGAAACGGGACTATTCTATTTTGATAA
CTCATTCAGGCCGGTGCCACTCGAACAGCAGTACATCGGTGTGACGGAGAAGAAGGCCCT
AAAGAGATTCCAGGTCATGAACGATATTGTCTACGAGAAGACGATGGAACACGCCGGCAG
GAATCAGATCCTAGTTTTCGTTCATTCGCGTAAGGAGACCGGGAAGACGGCGCGCGCGAT
ACGCGATATGTGCCTGGAGAAAGACACCCTTGGGCAATTTCTTAGGGAAGGTTCAGCTAG
TATGGAAGTACTCCGGACTGAGTCGGAACAGGTTAAGAACCCGGAACTACGGGAGCTGTT
GCCGTACGGGTTCGCCATACATCACGCCGGCATGAGCCGAGTTGACAGGACCCTCGTCGA
GGATCTATTCGCCGATAGACATATACAGGTGTTGGTGTCGACTGCGACGTTAGCGTGGGG
CGTGAACCTACCGGCGCACACTGTGGTGGTGAAGGGCACCCAGGTCTATTCCCCGGAGAA
GGGCAGGTGGACCGAGCTAGGAGCCCTGGACGTGCTCCAGATGCTGGGGCGAGCTGGCCG
TCCCCAGTACGACTCCAAGGGAGAAGGTATCCTGATAACAAACCACTCGGAGCTCCAGTA
CTACCTGTCGCTGTTGAACCAACAGCTCCCGATCGAGTCCCAGATGATAAGCAAGCTGCC
GGACATGCTCAACGCTGAGATAGTCCTAGGTTCGGTCCAGAGCGTCCGGGACGCTGTCAC
CTGGTTAGGTTACACGTATCTGTACATAAGAATGCTGCGTCAGCCGGCTTTGTACGGGAT
CTCGCCGGAGAAGATGCAGGAGGACAACCTGCTGGAGCTGCACCGAGCTGACCTCATACA
CACAGCGGCCAGCTTACTCGACAAGGCGGGACTGATCAAATACGAACGCAAGTCCGGTCA
CTTCCAACCGACGGAACTGGGCCGTATCGCGTCCCACTACTACTGCACGTACGAGACGAT
GCAGTCGTACAACCAGCTCCTGAAGCCGACCCTCGGCGAGATCGAGCTGTTCCGCGTGTT
CTCCCTCTCCGGCGAGTTCCGGCACATCGCCGTCCGGGAGGAGGAGAAACTCGAGCTGCA
CAAGCTCATGGAACGGGTCCCGATACCAATTAAGGAGAGTATAGAAGAACCATCAGCGAA
GATCAACGTCCTCCTCCAGGCTTACATATCCCAGCTGAAGCTGGAGGGGTTTGCGCTGAT
GGCTGACATGGTCTACGTCACCCAGTCAGCTTGCCGGCTGCTCAGGGCCATCTTCGAGAT
TGTTCTCCACAGGGGTTGGGCCCAGCTGGTTGACAAGACCCTGGCTCTGTGCAAGATGGT
GGATCGCAGGATGTGGCAGTCCATGTCACCGTTGAGACAGTTCCGGAAGATGCCCGAGGA
GGTAGTGAAGAAGTTAGAGAAGAAGAACTTCCCGTGGGAGAAGCTGTACGAGCTCGGGCC
GAACGAGATAGGGGAGTTGGTTCGGGCGCCGAAACTCGGCAAGATGATACACAAATACGT
GCACCAGTTCCCGAAGCTCGAGCTCTCGACCCACATTCAGCCGATAACGCGTTCCACGCT
CCGGGTCGAGCTCACCATCACACCGGACTTCCACTGGGATGAGAAGGTCCACGGTCAGTC
CGAAGCGTTCTGGATCCTCGTGGAGGACGTGGATTCGGAGGTGGTCCTCCACCACGAGTA
CTTCCTGCTGAAGCAGAAGTACTGCAAGGACGAGCACCAGGTGAAACTCTTCGTGCCTGT
CTTCGAACCCCTCCCGCCTCAATACTTCCTCAGGGTCGTTTCTGATAGGTGGATAGCAGC
TGAAACTCAACTTCCGGTGTCGTTCCGTCATCTGATACTCCCGGAGAAGAATCTGCCACC
GACGGAACTGCTCGATCTTCAGCCGCTGCCGATATCGGCTCTTAGGAATGGCAAGTACGA
AGAGTTGTACTCGGAAACATTCCCGCAGTTCAATCCCGTACAGACGCAGGTCTTCAACGC
CGTATACAATTCTGACGATAACGTATTCGTCGGAGCTCCGTCCGGTTCAGGGAAGTCGCT
GATCGCTGAACTGGCACTCCTGAGGCTGCTCTCCACCAACTCCTCGGCCAGAGCGGTCTA
CTTACTCCCGAAAGATGCCCTGGCTGATATCGTCTTCGCAGATTGGTATCACAAGTTCGG
TACCAAGTTTAACCTTAAGGTCGTCCAACTGACCGGCGAGACGGCGACAGATCACAAACT
CCTGAACAAGGGTCAGATCATCATCACCACAGCTGACAAATGGGATATACTATCGAGAAG
GTGGAAAGTCAGGAAGAGTGTACAGAGTGTCTCGCTGTTCATAGTCGACGCGCTCCAGCT
GCTCGGGGGCGAAGAGGGCCCAGTCCTCGAGGTCGTCTGCTCGAGGATGAGATATATTTC
CTCGCAGATTGGTCGTCCGATACGTATAGTGGCTCTGTCACTCCCCCTGGCGGACGCGCG
TGACGTCGCGCAGTGGCTGGGCTGTAACGCCAACGCGACCTTCAACTTCCATCCCAGCGT
GAGGCCCCTGCCGCTAGAGCTGCACATACAGGGCTTTAACATATCACACGCCGCGTCCCG
CCTCGCCGCGATGACGAAACCGATATACAACGCGGTCGTGCGCCACGCCGGGACGAAGCC
GTGCGCCGTGTTCGTGCCGTCACGCCGTCACGCCAGACTGCTGGCGGCCGACCTGCTCGC
CCTGGCAGCGGCGCAGCGCCGCCCGGCGAGGTTCCTGCACGCGAAGCCGGACCTAGTGCA
GCCGTTCCTCAAGCGTATACAGGATAAGATGTTAAAAGAGACTCTGGGCGCGGGAGTGGC
GTATTTACACGAGGGCGTGGAGCCGGGCGACCGGCGCGTCGTGCAGCAGCTGCTCGAGTG
CGGCGCGATACAGCTGTGCGTTGTCGCTGCCGAGCTCGCGTGGCCGCTCGCCGCCCACCT
GCACACCGTCATAGTGGCCGACACGTGCACGTACAATGGAAAGATGCACAGTTACGAGCA
GTACCCGATAACGACCGTGCTGCAGATGCTCGGGCGGGCGTGCAGACCGCTCGAGGACGA
GCATTCGGTCGCCGTTCTCATGTGCGCCGCGCACCACAAGACGTTCTTCACTAAACTCCT
CAACGACTGTCTACCGCTCGAGAGCCACTTGGACCACAGGCTACACGATCACCTGAACGC
TGAGATTGTCACGAAGACCATAGAGAATAAGCAGGACGCTGTCGACTACCTCACTTGGAC
CTTCCTCTATCGGAGACTCACTCAGAATCCCAACTATTATAACCTCCAAGGAGTCACTCA
TAGACACCTGTCAGACCACCTGTCAGAACTGGTCGAGTCTACGCTGAACGACCTGGAACA
GTCTAAATGCATCGCGATAGAAGACGAGATGGACGTCCAGCCGTTGAATTTGGGAATGAT
CGCTTCGTATTATTACATCAACTATACTACCATAGAGTTGTTCAGCCTCTCGCTGACCAG
TAAAACGAAGATCCGCGGCCTCCTGGAGATAATATCCTCAGCTGCGGAGTATTCAGACCT
CTGCATCAGACATCGCGAGGAGAACATCATCAAGGCACTGGCCTCCAAAGTGCCCCACAA
GCCGACAGCCCCCTCTGGGGGGGCGGTGAGGTACAACGACACGCACGTGAAGGCGCACGT
GCTCCTCCAGGCGCATCTCTCCAGGATGCAGCTCCCGGCGGAACTGCACGCGGACACCGG
TACCGTCCTCACCAAGGCCATAAGGCTGATCCAGGCGTGCGTGGACGTGGTCTCCAGCAG
TGGGTGGCTCTCCCCGGCGGTCGCTGCGATGGAGCTAGCCCAGATGGTGACGCAGGCGAT
GTGGGCCAAGGACTCCTACCTCAGGCAATTGCCTCACTTCACGCCGGAACTTGTACAGCG
TTGCTCCGATAAGAACGTTGAGACGGTGTTCGACGTCATGGAACTGGAAGACAACGCCCG
CGCGAAGTTATTGCAACTGTCGCCGACAGAGATGGCGGACGTCGCGAGATTTTGCAATAG
ATATCCAAACGTCGAGCTCAGTTATGAGGTGAAGAACGAACGTAGACTCCGCGCCGGGAA
GCCGATCGTCGTGGAAGTGTCTTTAGAGCGAGAGGACGATATCGTCGGACCCGTCATAGC
GCCCTTCTTCCCGCAGAAACGCGAGGAGGGCTGGTGGGTCGTTATCGGAGAACCAAAGAG
TAACACATTACTCTCTATCAAGAGGGTTTCCCTCGCAAGGAATGCTAAGGTACGTCTAGA
TTTTGTCTGCGGCAGTTCCGGCCGGCACACGTACACGCTTTACTTCATGTCAGACTCGTA
CCTTGGAGCTGATCAGGAGTACAAGTTCAACGTGGAAGTCGGAGAAGCGGCTTCAGACTC
GAGCGATACAGATTAGAGAGGAACTCCCCTCTCCCCTCCTTATCCCCTTTCCCCCTCTCT
GTCC
(5284 bp)

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