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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c8900_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_U1_small_nuclear_ribonucleoprotein_C_[Plutella_xylostella]
Ontology
GO:0000243 C commitment complex
GO:0000387 P spliceosomal snRNP assembly
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0046872 F metal ion binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:42.68 TPM:41.33
ORF EntryO_SariASG1014_5prime_partial:A_SariASG_c8900_g1_i1
Sequence
(Nucleotide)
GGAGACCCTGTTCTTGCCTGTCACTAAATTTATCGGAAACATATCAAGCGTGGTTTGTTG
TGATCTGTTAGGGAATTGTATAGTAAAAATGCCGAAATATTATTGTGATTATTGTGACAC
ATATTTAACTCATGACTCGCCAAGTGTCAGGAAAACTCACTGTACAGGTAGAAAACATAA
AGACAATGTGAAATTTTACTATCAAAAATGGATGGAAGAACAAGCACAACATCTTATCGA
CGCGACAACAGCAGCATTTAAAGCTGGTAAAATTGCACAAAATCCATTTGGCACAAAAGG
TGCATCTATTCCACCACCTTGGGATCCTTCAGTGATGGGTCCAGGTGGGCCTAGACCTCC
AGTTCCCGCTCCCGGTGGTCCGCCAGGCATGATACCTCCGCCAACGATGGGTCCCGGCGG
CCCCATGGCGCCACCTATGATGATGGGCCCTCATGGTCCAATGCCTCCAATGATGGGAAT
GAGACCACCTATGATGGGCCCATTAATGGGTCCTATGGGCCCAATGGGGCCGATGGGACA
GATGAGACCACCCCTTATGAATGCACCACCAATGAATAAACAGTGAAAACTTGGTGTGTA
ATGTGTACATGTTTTTAAACATAAAGTTATTATAATTTAAAAGTGACAATATTGGGTATA
CTAAATGGAATATTATATTTCTGATGTATATACTGTTCAGAAAGTGGTGACATTTGAAAG
AGTGTCCATTGTTTATACATCATTGTCTGACTTGGTCC
(758 bp)

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