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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c39053_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		poly(A)-specific_ribonuclease_PARN-like_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:26.47 TPM:25.63
ORF EntryO_SariASG17074_5prime_partial:A_SariASG_c39053_g1_i3
Sequence
(Nucleotide)
GTACATTGTACAGTTTTTTTGTTGTGAATTAAAAACCACATTTAAACTCGCATTTGGATG
AATTTCTATCAATACTAATAGATATTTAACAATTGACAACTACTTATATTTTAATGCTAT
TTAATTAAAAGTTTGTTTCTTATAATATCGTTAAAATGGAAGTGGTGCGGAAAAATTTCA
AAGAAATGGTACCTCTTGTGAGTGACTCGATAAAAAAGGCAGATTTCTTAGCTATAGATA
TGGAGTTCACCGGTTTAATTAACGGACGAGATGTATCTGCATTTGATACTCCAGAGGAGT
ATTATCTCTGCCTATTGAAGGGATCTACGGAGTTTCTGCCGATACAATTCGGGCTTTGTG
CTTTCCAATGGGACGAGAAAGAAAAACAGTACGCATTAGATGCATATAATTTTTATTTGT
TTCCTCGTGATAAGTCTGGCCAAAATAACACTTTCTTGTGCCAAAGTTCTTGTTTGGATT
TTTTGGCGTCTCAGGGATTTGATTTCAATAAATTGATAAAAGAAGGTATATCATATGTGA
CAGAGGCAACTGAGAATAAAATGCGCAATAACCTCAAAATGAAACAGGAAGCATATTCAA
AAGAAAGGGAAAAAATAATTATACCTGAGGAGTTTAAGTCCTTGATAGAAGAAACATGTG
AAAAAGTTCGACAGTTTATAGATGAGAATAAATCTGACGAAATGGAAATAGACAGATGCA
ACTCATTTGTCAGGTTACTGCTATATCAAGAGCTAAGAAATACCTTCAAAGACAGTGTAT
TGGTACATACAAAAGTTGAGGATAATCAAAAAAGATTAAAAGTGACGAGAATAAAATCAG
AAGACGACACGAAGTTACATGAGACACGGAAGAAAGATCTCGAATGGGAGGAGCTTGAAG
AAGCCGTTGGTTTCTCTAAAGTCGCACGTCTCATTAGTTCTTCTGAAAAACTAGTCGTAG
GACACAACATGTTACACGATGTTCTTCATACGGTTAATCATTTCTTCCAACCGCTACCAC
CTGACTACAAGTCGTTTAAGGAATTGACGCACTTCATGTTTCCCAGTCTATTGGACACAA
AGTACATGGCAAGTCTACCACCGTTCAAGGACAAAGTGAATTCGAGTGTGTTACAGCATT
TACTAATGACATTGTCCGAAGCTCCATTCTCGTTACCCAAAGTTGAATCGAGGGCGGGCC
GCGGGTACAGCCGGCTGGAGGAGAAGCAGCACGAGGCCGGGTACGATGCTTTCATCACAG
GGCTGTGTTTCCTCGCGATGCAGGCGCACCTGTCGCGCATGCGCGGCGAGCCGCAGCCCT
CCCGCTCCCTCTCGCCGCACTCCGCCGCGCTGAAGCCCTTCCTCAACAAGCTCTACCTCT
CGAAGACGGCGCGCCAGGAGTCACCTTACATGAACCTCACCGGACCTGATCCGACTCCGT
CCAGGGATCACGTGTTCCACCTCACGTTCCCGAAGGAGTGGCAGAGGAATGAGATCAATC
AGCTCTTCAGCCCATTTGGTCCAGTGACGGTGTATTTTATCGATGACGTATCTGCGTTAG
TCGCATTGTCTTGGAGGGATAAAGCGCAGAATGTTGTCAGAGCGGTGTCTAAGAATTCGC
AACTGCGGCTTCTGCCCTTCAATAGATACAAGGCAATGTTGGCAGTTGCTGGCAATACAT
CGATGGCGGGCTCGACGCAGGGCGCAATGATGACAAACAACGTCAAGATCTCAAACGAAA
GACCTCCAGTGCTGTTGGCCAGTTGGCATCCCCCAAAGATCTCTACAATGACTGGCTTGC
GCCAGCCGCATCCGCCGGATTCTCGCAACCTTCATCAGTTCGTCGGTCCACCTTGTTTGT
GGGCCTATCCACGCTGCGGCTTCCGGAACACGCCCGAGTTAAAGGTTCAACAAACATTTA
CCAGCAATATTATTGGAACCCGTACGCCGAAGTCGGCCGAGCTGCCAGAGAAGGTGGTTC
GTGAGCGCTCGAACAGTTTGTCCAGCGCGGACAGCGGGCAACCGGCGAGAAAGCGAACCT
CGTCTGGTGTCTTTCTGATCCAGGAGGACGAACCGCCGCCGAAAAGGACAGACATCGTCC
GATCCAATTCAGAGGGGTCCGAGAAACCCAAAGCCGATGGGACAGCGAACGGACTCCGGA
TACCGTTGGAGGTCGCCCAGAGCGAGGAGAAAACGAAAGAGAAGAGAAAAGGGAAGAAGA
AAGAAAAGATTATAGAGAAATTTGACCCTGAAGCCACGACGAAATGCGTCAGTGGACATT
TCAAAGAAAGTGATAGTTGGGAATAAAAATAAAATGTCGTCAATGTTTTAAAAAAAAAA
(2339 bp)

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