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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c39025_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		sorting_nexin-27_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0001772 C immunological synapse
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0042493 P response to xenobiotic stimulus
GO:0071203 C WASH complex
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:7.42 TPM:7.18
ORF EntryO_SariASG16932_3prime_partial:A_SariASG_c39025_g1_i1
Sequence
(Nucleotide)
CGAAAATGAATACTGTTCAAAATGGCTGAGACAGAAACCGATAATAACAGTGTTATCAGA
ACAGATAGAAGCAGTAAGGGAATTGTGCCTAGCAATGGGCCCCGTCGCGTTACTATATAC
AAAACTGAAACCGGATTCGGTTTTAACGTGCGCGGTCAAGTTTCTGAGGGTGGACAGTTG
AGGTCAATCAACGGGGAGCTGTATGCTCCTCTGCAGCATGTCAGCGCAGTCCTCGAGAAC
GGAGCGGCTGAACAAGCCGGGATTAGAAAAGGCGATAGAATTCTCGAAGTGAATGGCGTG
AACGTCGAAGGTTCAACTCACAGGCAGGTCGTTGACCTGATCAAATCTGGAGGCGACTGT
CTAACATTGACGGTCATATCTGTCACACCGAGGGAAGCAGAACGGCTAGAACCGTGCGAC
GATGGGTCTGCGCCGGTCGGCGTCATCGGCGGCGCTGCCAACTCGCGCGCCACAGTGTAC
CAACGTTACGACTACACGGACAAGCGGTCCTTGCCCGTCTCCATACCGGACTACCGGGTC
GTGATGGAGAGGAACACGGGTAGATCTTATATCGCGTTCAACGTGCACATGGCCGGAAGA
CATCTCTGCAGCCGCAGGTATAGAGAGTTCGCGGCCTTACATCAGCTGCTGCGGAAGGAT
TTTATCGGGTTCAATTTCCCGAAGCTGCCGGGAAAGTGGCCGTTCACACTGAGCGAGCAT
CACCTCGACATGAGAAGGAGGGGCCTGGAACAGTATTTGGAAAAAGTATGCGCTGTGCGC
GTGATAGCGGAGTCGGACGCGGTGCAGGAGTTCCTGACCGACTCGGACGACTCGTCGAAC
CCGACGCCGGTGGAGCTGAAGGTGCTGCTGCCGGACAAGGCGGTGGCGACGGTGTCGGTG
CTCCGGTCGACGAACGCGGACGACGTGTACCGCGCCGTCTGCGACAAGATCGACCTGTCG
AAGTCGTTGCGGAACTATTTCTATTTGTTCGAAATCGTCGAATACAATTTCGAGCGCAAG
CTGCAGCCGAACGAGTACCCGCACTCGCTGTACATACAGAACTACTCGACGGCGTCGAGC
AGCTGTCTCTGCGTGCGCAAGTGGGTGTTCAACCCGCGCGCCGAGCTCGCGCTGCTCGGC
GCCGACCCCACGGCGGCCGCCTTCATCTTCTGGCAGGC
(1178 bp)

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