SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c39004_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		protein_SON_isoform_X2_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0000910 P cytokinesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043066 P negative regulation of apoptotic process
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0050733 F RS domain binding
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:14.98 TPM:14.51
ORF EntryO_SariASG16862_complete:A_SariASG_c39004_g1_i5
Sequence
(Nucleotide)
CCTGGTCAAATCACTAATTCGCCATTCCATTAGGAAGTGGAGTTTTTTTAACAATTTACA
TGTTATGTTATTTTGGTTTATTATAAATATTAATAAGTGGGCCATTTTCATATAAGGTAA
TGACGACGTTAATAGATAAGATTGAAAAATTAATCAAAAGAGAGAAAACTACACCGGAAC
GAAAGAAAGATGACTCGAAGAAGTCGTCTAATGAGATACTCTCCGAGTTGTTCGGTGTCT
TCAATGCAGATCCACCTAAAATTGACGATGTATCGGTAAAGAAAAAGAAGAGTAAAAAGA
AACACAAGAAAAAGGAGAAGAGAAGTCGTAGTTCAAGCAGTGATAGCGATACCGACTACT
CTGAATATTCACACAAACGTAAAAAGAGAAAAAAGAGCAAAACTAAGAAACGTAGACGTA
CTCGTTCACCCTCGATCACCGGATCACTCACACCGGTATTAATCAAACCAGAACAAGTCA
AAGTAAAAAATGAGCCTGTTGAAAAATTATCTAACAATAATAAGGTTAAAAGGGAAATTA
AAATTGAAAAAGATGAAAACAAAATACAACACATTAAAACAGAAGACAGAGACGATTGTA
CCCCACCAAAAACACCTGAGGCTATTCATATACCTATGCCTGAATCTCCAAAAGAACCCA
CACTTGAATATAATACAAATCAATTAGACAATAAGAAACAAGAAGTGGCTGCTGACAATG
ACAAAACAAAATCAAAGATTCAAATTAAGAATTTAAAGTTCAGTGCAGTATTCGAAGAAA
CAGTAAAGAAAGCTGAAGAAGAGGCTAGAAAGAAAGCTGAGAAATATGAAGAAGGTGAAT
ACACAGACTCATCAAGTAGTTCTGTGAAGGAAGTTGGAGTTAATTCACAATTTCCCAAAA
CATCTGACCCAGGTGGTATACTAAAACAACAAAGTCTTGAAGAAGTTAAATTAATTACTG
AAGAAAAAAGTGTTTCTAGTAAAACTAAGCGTACTGATAGTTCACATAAATCATCATCTC
ATAGACATAGGAGCAAATCACACAAAAGATCTAAAAGTAAATCTCGCCGCTCGAGGTCAA
GGTCTACTTCAAGAAGGCATAGGCGTCGGTCTAGTAGTAAATCACGTAACAGATCAAGAT
CAAGAAGAAGATCTCGGTCAAGAACTAGTCATAGATCTAGACATTACTCTCCCAGGCACA
GAAGTCGTAGATCGAGGTCAAGGTCACCGAGCGGTGTGAAATTAGCTGATAGTGAAAAGA
AACGTCTTCTGGAAGTAGCTAGAAGGAATGCCATTAATATGCTTAAAAATGGCGCTGTGC
CAGCCGGCGCGGCGGTCTTACCGCCGCACACTAGAAACCAAGTTATGGCTGCTATACAAT
CTGGAGGTAAATCTGTCGATGAGTTGACAGATTTCTGTAAACATTTATCGAAGAAGGAAG
CTCTCGGTGAACTATCTTCCGTCTCGTCGAACGACGATAATATGAGTGAGAACGAAGACA
CGATAGCGTTCCACCATCCCTTCTTAGTGAAAGAGAAGGCCCCTATAATTATGAGTATAA
GGGGCGGTGCACCGGTGCCTGTGAAGTCGACAGCTCTCCAAGTGATCAACAAGGAGGAGC
TTCGAATACAGTTTCCGGTCTCTTCGGGAACACAGCACAGGGAACAGGCCTCGGAATGGA
CTCCCGTCTCACCTTCCAGTAACGATATGCAAATTGCGAACATTAGCTCTATACCACCAC
CGCCGTTACCACCACCGCCGCTACCACCAGCTGCACCACTTATACCAGATCCAGAGGATA
CATCCCCGAGGCCGTCATCAGGACCGCTTGCAATACTCCCCCCACCTCCACCGGATACAA
TCGCACCTCCTACACATATCAAAAACGTATCATCGGGCAGTCTCACGACGACGCTGCCGG
CGCTGCCGGCCCCCGGACCTCAGGTGTACCCGCCGACTGTTGACCCTTCGAAAATGGATA
TGGCGGCTTTAGTTTCACAGAAACTATCTATGATCCGGAAAGAACAAGAGGAGAATGAAC
TGACCAATGGCGGTACGAATAGTGCATTTAACTACGGATGGACAAGGGATTCGTCGTTAG
GTCAATTCACAGGAACAACGGGAGCCCACATACTTACCCCCAAAGAATTGGCCAGTGGTA
CCCAAGCGTGGGCTAAAAAGGATCAGCTCCAACGTGCAGCGCCCGTAGAAAGCGGAATGG
GTATGCACCTACTGCAGAAAATGGGCTGGACTCCGGGACAGGGGTTAGGTAAAGAGGGCA
CTGGTACGCTACAGCCATTACTGCTAGAAGTAAAACTGGACACGCGAGGTCTGCAGGCCA
AAGAAGAGTATTCTGGTAGATATAGTAAAGGGATGAAACCGCCGAGACCTGGTGGTCGTT
TGCGGGGGGG
(2410 bp)

- SilkBase 1999-2023 -