SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38933_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E2/E3_hybrid_ubiquitin-protein_ligase_UBE2O_isoform_X3_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006513 P protein monoubiquitination
GO:0006810 P transport
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044822 F RNA binding
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
Transcript
Level		FPKM:19.21 TPM:18.60
ORF EntryO_SariASG16712_complete:A_SariASG_c38933_g1_i2
Sequence
(Nucleotide)
GCAAATTTTACCTGATTTGTGAGAAATTTTGATTAGCTTAAACGAAACGTACGTTTTTTT
GCACAGATAACTGTAAGATGGCGGTTCCGTTGCATATTTTATTGACGCATGCGCCACACA
TTGCAATCAGCTGTCAGAAAGAATATAAGCACGTAAAAAAACAAAATTATTTGTGTCTTT
AGATAATTCCCGTCAAATATGGCGGGGCAAAATCCAGGTTCGCCGACTGACTTTCAGTAT
TTTTACGAGGATGAAGTTTATAAGATCAACAACCGCGGCCAAGTGGTCTTTGGTTTGGTG
CTTGAAAACTACGAAGCCAATTCAAGTGATCAAGAAAGCGACAATGAAACACCTATACAA
AAAGGTGAAATTCGTGTTGTATGGCACCCCTCTGGCACCGAACGGGTTATATCAGAGAAG
TCCGTTGGCCTGGCTGACCGGTCCCTTATGCCAGGAGATGTCGTCCGTAGACTTATCGCC
GGGAAAGATACTCAACGCGGTTACTGTCGCGATATCGTTATGACAACAGCTCTGCAAATA
GTCGGCACCAAACACGTGATCTCCTGTGTAGAGAGTGAAAGACTGCAACCCTTGGAAGAA
TTCACTCCTGATTTGGCAGTGTGCCTCGACTCTTGGGTTGGAACGTCTAAGGCTGTCCAT
AGCAAGCTTCGCCTGGTATCAAGTGATGGATCTCGACTCGAATACCCAGACCTTGATACG
TGTCCTCTTGAAGACTACTCCACGCGGCGCCGTCGGTCTACCCCCTACTCTTCTTCCGAG
TTCTACCCTGGACAGGTGGTCTATGGACCTCTTGGCTCATTGGATAACGCAAATTGGCTT
CATATGACAAAAGAAATGAACGCTGCCAGAAAGCATAAGATGCATGATCATAAGTTTACT
GTGGAAGCTGTCGTGACAGAGAGTGTTAGTGTCCACTGGCAATGTCGCGCCCTCTGTACG
CACCCCACAGAAACAGGTGCACCTCAGCAACCCAAATTTCTTGTCGAAGGTGAAGATTTG
AAGAATTTGAAGCTGTTGAACGTTTTTGAGCCGTGCACATTGCAAGTCGGTGACAGGAAT
TTCCTAACCATCGGTCAGGAGGACACGTTTATAGGCAAGAATCAGTGGAGGAAGCATCAG
AGTAAATACTACAGGAATCTTCGTAAACAGGCGAGGCCGATTAAGAAGGCGTCAAAATCT
GAAACAAACTCCAGTGAACATGTACCGTCTAGACCAAAGAAACGTGCATCATCACATCGG
AAACTGAAATCGACTGATAATGAAATGGACATCGATAATGCGGAAGAGAAGTTGGAATGC
CTGGACGACGTGCTGAAGAGGGGGGATTCAAACTGTCCCAGTATAAAGGTAGAGGCAATC
CGTGACGTCACTCTCCCGATGGCTAGCAGCCAGGAAGACACGGCTACGGAGGAGAAGAAC
GATTCAGGAATAAGTCCGGAGCCTCGGCGCGAGCAGAACCCGCTGGTGAACGGCGACAGT
AAGACCGCGCCGGGTTACAACGACGACGACTCCGACAACTGGGAGAACACCAGCAGCGAC
GGCAGCGACACCGATAGCGGCGCCACGTGGTCGTCGCGTTGCTCGTCGGCGGCGTCGCAG
CGCGGCAAGCGGTCGCCGCAGCTTGCGGTGCGGCTGCTGCGCGGGAAGCGTTTGAAACGT
ACACCCCGGCGCGTGCCGCCCGCGCCGCCCCCGCGCCTCGGCGAGCGCGTCGTCGTCGAG
ACTCTGCACACCACCAGTCACGCCAACGTCGTCTGGCAGGATGGTACTATAGAAATGGGC
ATACCATCGACACAGTTATACCCCATACATCATCTCGACGGACAGGAATGCTTCCCGGGT
GACTTTGTTGTTAGTGGGGCTGCTAATATTGAAGAGAACCAACAGTTGAAGCATCGTGAA
TATGGCGTCGTTCAACGTGTAGACCATCACGGTCGCACAGCGATCGTTCAATGGTATCGC
ACATATACCAGCTCCGATGAGCCAGTTCCGCAAATGATGTACGAGAGTGAGGTCAGCGTT
TATGACCTTAAGGACCACCCGGACTTCCAGTACCGGCCCGGCACCGTGGTCATTAGAGTC
GCTAATTTCACCGGCGAGGACACCAACTGCACCGCGGGACAGGTTATTGACAATTTCCCA
TCTGGACGCGTGAAGGTATGGTGGGTCGACGGACACACGAGTATGTGCTGGCCTCAAGAT
CTTTATAAGGTGGGTGAATACGACTCGGACGATAGCGAACTGTGGGCCTCGGACGATTCC
GGGTCCGAGGACTCGTGGGAGACCCAGAGCTCCGCCCACGAGCCGGAACCCCCCAACCCC
GCGGCGGACGCGGAGCAACCGCCCCTCGGCCCCGCCGCGCCGCCGGTGCCTGCCGCCGCT
TCTGACGCTACAACTCAACAGCATTCGAATACGGAACAGCAGATAAGTGAGAAGGCGAAC
GATAGCGGTATCACGGTGCCGAAGCTTCTGGAACCGCGTCTGGCGGCGCACATCGAACGC
GGCCGTATCGCTATGCGCCGCCTCGAGGAGATGTTCGCGAAGCATCCAACGTTACAGAGC
CAAGAGATAATGCGCAAACTTCTCAATCTATATAAGGATTGTCGATTTTTGGATCGATTG
ATGGGCACGTCGTTTTTCCACGAAGACCATTTCTTGGGTCTGCTCGAACGCGTCCGTGAA
CGCGGCGCGAGCACGCCGCGCGCGGGCGAGCGTCGCGTGCACGAGCAACTCGCGCGTCTC
TTCACGCCGAACGAAACCGCCAGCGAAGTGAACGACAAGTTGTTGCCCGACATGCTCGTC
GACGCACCCCCCGACCCACCCGCGCACGCCATCATCACTGCCAACGTCACCATCGAACCT
ATGGAGGTCGAAAGCGGCCTTCCAAGGAAACCATTACACTTGAACATTGATCTGACGCAG
GCGTCTGGATCAGAAACAAACACTACAGTGGAAATTAATAATACTACTGGAAATGCATCG
TCAGATACTGGTGACGTCGATAATACAACTCGGAACGTGTGCTATAAGCTTTGCTCTCTA
ATTCACTCGCAGTTAGAAAAGGCACACGCCGAAGTCAGTCGGAGAAGGCCGCAAGAATTG
GCCAATTTCCTTAACGAAGTATTGAAAAAGAGAAACGCGTCTGAAGAGAACTTACTCTAC
CACTTTTCAGTTCAATACGGTGCTCTGGTGGTCAGCATGGCCGAGGAGGACGATGTGAAG
GAGGAAGAGAAGAAATCAGATGAGGATACTGAAGCCTCCGTGAATGTTAATAATGTGAAT
ACTACATCTGCCACGACCGATGGTGATGGGTTGGTAGCCACAGTTACGGCGCCGCTAGCG
ACAGTGGAAGGGGTCGACGTAGAAGCGGAAGGTGAAGGTGCGAAAGCGGAAGTCGCGGCA
GGCGAGGGCTTCAGTCTTTTGGAGTTCGCACCAGCCGCGCACCGCTTCCAGCTCTCGATC
CTGCAGCCCTCAGACCCTAGAACCTTCTATTCGGCTGTCAAACGGGAAATTAAGCTGCTG
AAAAGTGACCTACCACCTGGTGTCTGGGTGCGAGGTTACGAGAATCGTATCGACTTACTA
TCGGTGATGATAGCCGGGCCGACGAAGACGCCGTACGAGGACGGGCTGTTCGTGTTCGAC
GTACAGTTGGGCGGGGAGTACCCGCGCGCGCCTCCGCTCTGCCATTACCACTCCTACTGC
TCTGACCGACTCAATCCTAACCTATACGAGGACGGAAAGGTTTGCGTTTCTCTGCTGGGG
ACGTGGTCCGGGCGCGGGGTGGAGGTGTGGGGCAAGGACAGCTCCCTCCTACAAGTCATA
GTGTCGTTACAAGGGTTGATATTAAACTCGGAGCCGTACTTCAACGAAGCCGGCTATGAG
AAACAGAAAGGCACCCAACAGGGTAACGAGAACTCGCGCATGTACAACGAGATGGTACTG
CTCAAGCTGGTTCAATCGATGACGAAGATGGTGCTGAACCCGCCGGAGCCGTTCGCCGTC
GAGATCGCGCGTCACATGCGCGCGCACGCCGCCGGCCTCTGCCGCCGGCTCGAAGGACTC
GTGGCGCTGTCGAACGGCGAGCCCGGTGACGTCACCCCGCCCGAGTACCCGCTAGTGCCG
GCGTCGCGCGGCTTCTGCCTCACGCTCCGCTCCTCGCTGGAAGCGTTCCGCGCCGCGCTG
CGCCGGTGCGGTATACACGTCGACACGTAGCGCACGCGTGCCGCCACGCGTAGCGCACGC
GCGCCGCCACACGTTCGCCTTTGCGACGTCGACGTGCAGCGTGCGTGGTCACTGAGACGC
GCGTCTTCCTGCACACGTGACGTGACGCGAGTCGATGCGAATCCAATTACACTGAGTTTT
GATTCGGTTCGACAAGCGTCCACGTCGCGTCCGGTGGCGTTTTAAAAGTGCGTTTCTATT
AACGCGAACGTCGACGGGTTGACACATTAAGAATTCAAAGTGAAACGTCGGTCGGTCAAT
AACATTTAACCGGTTGAAAATTTCAAGTTTACGGACTACGTCGCTAATATGTACGGAGTT
GAAGAATCCACGTACTTTCCTATACCCGATTGCGCGCGTTTGATTCTCTCTATAGTATAA
CTATGTCTTGTGTTGTGTCACGCAACTTGAATTTGCAAATAGATTACGTGTTTTGTGAAA
ATTAAGACGCCGGTCTCTAAGTCTAGACGTTTGATGTGGCCACATCGAAGCGTGCGTACG
TCTCCCTCCCCCCCCCCTCTCCTCCTCCCCCGCAACCGTTTCGTGTAAAATTTGCTGGTG
ACGTAGTGTGTCGACCCTTATGATCCACATTTTCCAAAGGAATAATATCACCGTCACATG
ACGTCTCGTGTGGAAATTAAGACGCGCGTCTCAGTGACGAAGTTGTGATTTGAACGCTCT
CGTGGAGAGAACCGTCACCGTTTCACATGTATCTGAGTTAAAAAAATCTAATAATCACAA
TACGGGAACGTCACTTTGCGGTTTGAAAAATATACAAATAAAAAGAGAATATAAATAAAT
AAAAAATAAATAAATGATATATTTAATTATGATTATAGCCGTAATATTATTATTTATTAT
TGTGATGCACTTTTTCGATTGTAGAGGGAATGTTTAAAAAGATATTCGCGACCCCGCTCT
ATTTTATTATAAGGTCTGTGTTTATTGTTGTTCACTTTGTTTATTTATTTATTTTTATTA
TGTTTCTTTTTTTTATCTCGTCAATTCCACACAATTGAAAATTAATTTACCCCATTCCCT
TTGATGATATTTACAATAAAAATAACGGAAATTCTAAACGATACGTCGAATCTTATGGAA
GTGGATAAATGTGATCGGTGAGTTATCATTGAGTAAATTTGTTATATAGTGTTATTTATT
TATTTATTTTAATAAAAAAGGAAATAAATAATTATTGTGCTACTTCTAAATATGCAGTGA
TGTAATTTACCAGTACTTATTTGGAATTACCTAAAAATATTTTTACACAGCGAAACTATA
CTTGTTTCTCTTACTGTTAATATTAAATAAAGATATTTAAATGAATAAAAAGAAAGACAG
GTGATTTTTCTTAGTATACATATATGCGCGTTGACGATTATTGTTCCTAGTTATGTCCAA
TTTTTTTTTGTTTAATTATTTATTTAATATTTTTCCTATTCATAAATATTTGAAAACTGC
GTCCATTGTCTGTCGTTTGTTTATGATATTTTGTGTGTCCGTGCGCGTAGATATTTCACT
GAAATGTATGTCATTATTTAATTTATTTCCCGTTCAGTAAGTTATTCATTTATATAGTAA
TATCCAATTTGGTTAAATCGTAACACCATACTTATATAGTCAGAACACATATAGATAATT
ATTTAGAAATTCATGTTTAGACAAATAATATACACAAAAGTTTTAGAACCATATTTTCGT
CTGTTATCATCGTTACCATTTTTTTTTTATTCTTAAAAAATCTAGATCTGTGCCCATTTC
GACCCGTTTCTTTCGTTATTTGCGC
(6025 bp)

- SilkBase 1999-2023 -