SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38929_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		lanC-like_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0009789 P positive regulation of abscisic acid-activated signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030864 C cortical actin cytoskeleton
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070273 F phosphatidylinositol-4-phosphate binding
Transcript
Level		FPKM:4.04 TPM:3.92
ORF EntryO_SariASG16701_5prime_partial:A_SariASG_c38929_g1_i2
Sequence
(Nucleotide)
CCGATATTGGGTAATGTTGGGATCTGGTGGTTTGGCGCTGTATTATTTAATGTCCGCGTT
AAGGAATAACGGTAGTCACGAAATATTAAAGACTTCAGTGCAGTATTTAAATTTAGATAA
CTTAAAAGGAAAAAGAATAAGTTTTCTTTGTGGAGATGCTGGTCCACTTGCTTTGGCAAC
TGTAATATCATACAAATTTGGGAATAAACGTCCTGATATGTTGCCTGATTATAAAACTCT
GGCACAAAGATTAATGGATTTAATATCTTTATTGAATGCTTCAGCCGATGAACTCTTATA
CGGAAAAGCAGGATATCTTTATGCTTTATTATTTGTTAATAAAAATATTCCTGGAAAAGA
AATTATACCAGCTAATCATATTGAGAAGGTGATTAGCAGCATTTTAAAATCTGGAAAACA
ATTTTCATCAGAAATGGTATCAGACAGCCCACTATTGTGGCAATGGCATGAGAAAATATA
CTTTGGTGCAGCTCATGGCATGGCTGGAATACTATACATTCTTTTACAAGCTCGCATTTA
CATTAATATTAATGACATGCGAAATTTCGTAAAACCAAGTGTGGATTGGTTACTAAATCA
GCGCTTTGCAAGTGGCAATTTTCCTTCATCTATGAATAGTTCTAATGGAGATAACCTGGT
TCAGTGGTGTCATGGCGCTCCTGGTTTTGTAGCGTTATGCATTTTAGCACATCAGGTATA
TGAAGAGGAGAGGTATTTAAATATTGCACTCGAGTGTGGTGACGTGATATGGCAGCGAGG
TCTGTGTAGAAAGGGTTACAGTTTATGCCACGGAGTCAGTGGAAACGCTTATGCTTTTAT
TCAACTATACCAATGCACTAAGGTACTTTTGAATCAATCAATTTATACTTAGGATGTGTG
TGTACATTTATGTTAGGACTTTTATGGCCCAACTGAGTCGTAAAATGGTAGTCACATAGT
CAAAAACCCATTGTAGTGACACATTTCGGTTCGTCACCTTCCAGAGTACATCCAGCAGTT
AGAACGTTGATAGAGCAATTGAGTCAGACTTACAACCGCCGTACACTTGTGAAAAAGCCG
CCATAGTGACACGCTAAGACGCATCAGCAAGTTTATATCCGGAGCTACCTAGACATCTGT
AGAAGACATCGAATCGACACAAGCCGTGTGTGACTCTTCTATAGTAAAATCGCG
(1194 bp)

- SilkBase 1999-2023 -