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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38876_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_16_isoform_X4_[Helicoverpa_armigera]
Ontology
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
Transcript
Level		FPKM:7.70 TPM:7.45
ORF EntryO_SariASG16568_complete:A_SariASG_c38876_g1_i4
Sequence
(Nucleotide)
TTGTCACGGAAGATGTCTGACGGTCTTGGTGTACTTTTCTGACACAATTATAGAAAAATT
CAATTCATTTGTTACAAACGACTCTGTTAGGTTAATATCGTTATAGTGTATGTGATTGCA
GTTGCGCATTCGGAACAATGGTTAAGAAAAAGAGACAGAACGACCCTGGTGAAAACGGCG
ATGAATCGACTGAATCGTGCGAGGAGAATGTCAAATCAGCATGTCCTCACGTAGCGAAGG
CAGTCGATTTAACACGATTGAAGAAATCTTTAAAAGCGGGAGGTTTCGATAAAGAGTGCG
CCGAATGCAAGAAATCCAATATAACTGATAATTGGGACCCCGATTTTGAAGAAGATTTTT
CATTGTGGATGTGTTTACGTTGCGGCACGCAGTTATGCGGACGAACATGTAACAAACACG
CTTTGAACCATTTCAACACACCCCACTCTGACTGCCATGCCCTCACCACTAACACTTCTA
CTTGGGATGTTTACTGTTATAACTGCAACAATGAAGTAACTGCATCAACTTCAAAAAAAC
TTCATGAATGCATAGAATACCTAAAGAAACAGGCCATGGCTGGTGCAAACATAAAACCTT
TACCACCAATTGAATTACCATATGAACAGCTTAAAGATGTACCCACAATAGAAACTATAG
CCAAGGATCCATTAAAATTTAAAAATAAAAACTTGTCAAACCTATACCGAGTTAGAGGGT
TGACCAACTTAGGAAACACATGTTTCTTTAATTCAGTAATACAGTGTTTAGTTCAAACAC
CATATTTGTTGCAAGTTTTACAAGAAATGGCGACACCAGGTGAGAGATTTACATTACCAG
GGGGAAAGTTAAAGTTGAAGTCAGAAAGTGAAGAAGTGAAGGAAGTAGATTTGCCCCCAA
TCACAGGACAACTAGGAGAATGGAGTTTTTTGACTCGGATACTGGCTGAGACTCTGGAAG
AATTACAAACAGGTGAAGGTGGTGTTTACACTCCGAGGAAGTTGTTGTCTGCTTTAGAGC
TCAAACTGCCGCAGTTTGGAGGTGGTGATCAGCATGATTCTCATGAGCTACTAAGACATT
TATTAGAGGCTGTCAGATCGGAGGACCTTCGCCGGTATCAGTCGGTGATCCTGAGCAGCC
TTGGTATGAGCTCGAAAGTGGACCCTGCTAAAGTGGATGGTGAGGTCAAGCAGAAAGTCA
AGTTTTATGGACAACAAGCATCCGACACCATGCTCAGGCCTGAACAGGTGTTCCGGGGCT
TCTTAGTCTCGACCCTGGAGTGTCAGGAGTGCCTGCACCAGTCCGATCGAATGGAGTACT
TCCTCGACCTCTCATTGCCTGTGGCCGCAAGCAGACCTCAACCACCAGCGGTTGTACGAA
GGAAAACTCCCAATGGTAACTCCACTTCAAAAGATGAGGCACCGGCCGAAACTAATGGTC
CCACAAAGGAGGAGGGTAAATCTTCTTCGGAGTCGGATGCTGATGTCGAGGATAACCTTG
AGGATGCACCTAGGCAACCAGACACGCATTCGGCGTCCGTCGGTTCTCAGGCTATAGCTC
ACACAGCCGCCAATTTCGCTGCCTACCACATGGAATCCGGCTACAACTCGGAAAAAGTTA
TCAGCTCAGAATCGATCAGGACGAGCCCAGTCGACTTGGATAAGGAGAAAACAGACAACA
CTCCAGAAAACGCTGACAAAGACAAGATAGATATGGCGACTTCCACGACCGTAATACCAT
TAGAATACAAACCACTTATATCTGTTGAGAATGTGTCAAACCCTGACTCGGGAGTGGCCA
GTCCTGAAGCGACCAAGCACAACTCTACGGAGACAGTTGATACCGTCGACTCACCGATTA
ATGATAAAGAATTAAGCAGGGATTCGTTTTCCAGTGAAGTTAATTTAGATTTGATGAGTG
CGCAAAACAAGCTTTCCCCGATTAAGGGAGAATACGAAAGGCCAGTCTCGAGGATATCAT
TCGCTCCTGATTACAGCAATGAAGTAGTTACACGCGGTATCAGCGTACAGGGTTGCAGGA
ATCTACTAGAACACAGTGGGGAGAGCAGTTATGAGTCTCTTACCGAAAGCAAGACTCTTA
ATGATATTGATAACCATTTAGATAAACTTAAACTCCAAGAGGATGATATGAACACAAAAA
ATCCTATTGTCCCCTCGCTGGTGCCGATCGAAAGCCCGGTAGAACCCCCCGCTCCGCCAC
CTGTGCCGAAACCGAAGATGTTCAACACAGAAACGGAGAAACAGAGGGACTATATATCGT
ATCCTCGCCAGAGTCCGTTCTCTCCTCGATACGTGTGTGACGAGGACGAATGCAGCGTCC
AGTCTTGCCTCAGCCAGTTCACAGCGCTGGAACTGCTGACCGGTAATAACAAGGTTAGCT
GCGAAACCTGCACCGAACGCACCAACGGCAAGGACGGGAAGACCGTTTACACGAATGCGA
CGAAACGTTTCCTCGTGTCCAGTCCGCCGGCCATACTGATTCTCCATCTGAAGAGGTTCC
AGATAGGTCCGCGTTGCATGTTCAGGAAGATGGCAAAGCACGTCGACTTCCCGACGATCC
TCGACCTGGCGCCATTTTGTGATATGAACAAAGTGAGGAAGTTGCCGAACGCTAGCGGTT
GGCAGAACGAAGTGCTCTATTCGCTGTACGGTGTGGTGGAACATTCTGGAAGTATGCACG
GGGGTCATTACGTCGCGTACGTGAAGGTTCGCCAGCCGGTTAAGGCCGGGGATGCGAGAT
GGTGGTTCTTGCCGAAGAGCGCGAACACTATGTTGGCTAAAGCTGGTCGGGGTGACGGTG
ACTCTGAATCAGAGTCAGACCTGTCTGGATACGAGTCTGGCGAGGGTCCATCGTCAGTGG
CTGAGCCACCATCCGGCAAATGGTATTACGTATCAGATAGTATGGTATCGGAAGTCACGG
AGGAGAAAGTGCTAAGGGCGCAGGCGTACCTCCTGTTCTATGAGAGAATTTTATAAACGG
TCTCTCCCCGGATCCCGATGTGGAACTCTAGGTAACTGCGAACAGTCGTGTAACAAGGGG
TGCAATAGTCGTTAACTTTTGTTAACGTACTGTATACACACAATATGTCCTTTGTATTCT
GTTACTCTTTATTAAGTTTTACGTTATAACAAGTAAGACTATTCTGTATTATCAAACGTG
ACGATGATTATTTATTTGAAATACTTTTTTTTGTTATCTTATTTCACCCGGTTTTCATTA
GTATCGATACATCCAAATTAATAGGAGCTTTTTGATGGTCACACACACACAACTCATGTT
GTCAGTTTAATGGCCTAATATTCCTTTTGGCATTTAAGTGGAAGACTGACGCTTGAATTT
TTTGTTTTGTTAATGACTCTTCAATCCGTATAATTATCGACTTTCAGTAGTGGTCAGATC
GAAAAAAAATTTTTGCCTGAGCTTTCAATGAAGAATAACCACTGTTATTAACAGAAAACA
GATTGGTAGAGCATTTTCATATTTGTTACTGTGTCTATATCAATCACAACTTGATAAATA
TATAACCGGAAATTATAAATGTTTTGGCGTAATATTTGAGAGTCGGTAACTCTAGTAGTT
CATTATTTTACGTCGAATCGTCACTTAATATCGATTGAGATTGTGCTCAAACGCCTATAT
AAAAAAATAGAAAATCGATAACTTCTTTTATAGTGTCAGTGTGAAAAACATATGTATATG
TTCGTCCCCACCTTATTATTGGGTGTCATACCATTCGCATCTATAACTCGACTTCACATA
TATCCGCTATTTTCCTATGAAAAGTTCCTATCAAAGATTAATTACACTTATTAAGAGATC
TTGAGAATTATATCGTGTTTCAATGGAAACTATTCCTTTGAGCAAAATAAAACGGCAACA
CCGGCTTCTGTTTCATAGAAGATAAAATAACTATGGTGCTTCAGTATTCAGTCGATATCT
GCGCATATCTGGTCGAAGTTATAGAGCCCTGGAACCAAATTGGGGAACCATTCTCATTTC
AATGTTTTTTTCTCTCTGTACTATGTAAGTTTAACGTTTGAACGCGATCTCATCTGATGT
TAAGTGAAGTCTACTGCCATTCGTCTTCAGTTCTTTTTTAATATAGGCCACAATTAACTA
AATGATTGTCCTATTAAAGGCTATATAACAAGGAAAATGATTCTCAAACTGATCGACCCC
TCCCCAATTGTCATTCAATATATAATTTATAACGCAAATCGCTTTTGCTTTATTGTGGTC
TTCCATTAAAGTGTCAAGTGTACTATATTTAATACTTAGAAGTTAGTTTCCTTATGCTTG
TAATCAACGTGCATTGTATTAAATTATGAGGGGGTATATTCAAAATAAATCAATTATTTT
TCAACGAATAACTCTTGATTTTCTTTCAATTCTTGTAACTATTTTGAGCAATTGTGTTGT
TTTATAAAGCTTAACTTTAATATTTTAAAA
(4470 bp)

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