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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38876_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_16_isoform_X2_[Helicoverpa_armigera]
Ontology
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
Transcript
Level		FPKM:2.54 TPM:2.46
ORF EntryO_SariASG16563_complete:A_SariASG_c38876_g1_i1
Sequence
(Nucleotide)
TTGTCACGGAAGATGTCTGACGGTCTTGGTGTACTTTTCTGACACAATTATAGAAAAATT
CAATTCATTTGTTACAAACGACTCTGTTAGGCAGTTGCGCATTCGGAACAATGGTTAAGA
AAAAGAGACAGAACGACCCTGGTGAAAACGGCGATGAATCGACTGAATCGTGCGAGGAGA
ATGTCAAATCAGCATGTCCTCACGTAGCGAAGGCAGTCGATTTAACACGATTGAAGAAAT
CTTTAAAAGCGGGAGGTTTCGATAAAGAGTGCGCCGAATGCAAGAAATCCAATATAACTG
ATAATTGGGACCCCGATTTTGAAGAAGATTTTTCATTGTGGATGTGTTTACGTTGCGGCA
CGCAGTTATGCGGACGAACATGTAACAAACACGCTTTGAACCATTTCAACACACCCCACT
CTGACTGCCATGCCCTCACCACTAACACTTCTACTTGGGATGTTTACTGTTATAACTGCA
ACAATGAAGTAACTGCATCAACTTCAAAAAAACTTCATGAATGCATAGAATACCTAAAGA
AACAGGCCATGGCTGGTGCAAACATAAAACCTTTACCACCAATTGAATTACCATATGAAC
AGCTTAAAGATGTACCCACAATAGAAACTATAGCCAAGGATCCATTAAAATTTAAAAATA
AAAACTTGTCAAACCTATACCGAGTTAGAGGGTTGACCAACTTAGGAAACACATGTTTCT
TTAATTCAGTAATACAGTGTTTAGTTCAAACACCATATTTGTTGCAAGTTTTACAAGAAA
TGGCGACACCAGGTGAGAGATTTACATTACCAGGGGGAAAGTTAAAGTTGAAGTCAGAAA
GTGAAGAAGTGAAGGAAGTAGATTTGCCCCCAATCACAGGACAACTAGGAGAATGGAGTT
TTTTGACTCGGATACTGGCTGAGACTCTGGAAGAATTACAAACAGGTGAAGGTGGTGTTT
ACACTCCGAGGAAGTTGTTGTCTGCTTTAGAGCTCAAACTGCCGCAGTTTGGAGGTGGTG
ATCAGCATGATTCTCATGAGCTACTAAGACATTTATTAGAGGCTGTCAGATCGGAGGACC
TTCGCCGGTATCAGTCGGTGATCCTGAGCAGCCTTGGTATGAGCTCGAAAGTGGACCCTG
CTAAAGTGGATGGTGAGGTCAAGCAGAAAGTCAAGTTTTATGGACAACAAGCATCCGACA
CCATGCTCAGGCCTGAACAGGTGTTCCGGGGCTTCTTAGTCTCGACCCTGGAGTGTCAGG
AGTGCCTGCACCAGTCCGATCGAATGGAGTACTTCCTCGACCTCTCATTGCCTGTGGCCG
CAAGCAGACCTCAACCACCAGCGGTTGTACGAAGGAAAACTCCCAATGAAGACAATATGT
ACAATACGCAAGAGGAAAACAAACCTTCGAAACATCAGTTGAAGAAGGAAAGAATGGCTG
CCAGAAAGGCCGCGCGCAAAAACAAAGGTAACTCCACTTCAAAAGATGAGGCACCGGCCG
AAACTAATGGTCCCACAAAGGAGGAGGGTAAATCTTCTTCGGAGTCGGATGCTGATGTCG
AGGATAACCTTGAGGATGCACCTAGGCAACCAGACACGCATTCGGCGTCCGTCGGTTCTC
AGGCTATAGCTCACACAGCCGCCAATTTCGCTGCCTACCACATGGAATCCGGCTACAACT
CGGAAAAAGTTATCAGCTCAGAATCGATCAGGACGAGCCCAGTCGACTTGGATAAGGAGA
AAACAGACAACACTCCAGAAAACGCTGACAAAGACAAGATAGATATGGCGACTTCCACGA
CCGTAATACCATTAGAATACAAACCACTTATATCTGTTGAGAATGTGTCAAACCCTGACT
CGGGAGTGGCCAGTCCTGAAGCGACCAAGCACAACTCTACGGAGACAGTTGATACCGTCG
ACTCACCGATTAATGATAAAGAATTAAGCAGGGATTCGTTTTCCAGTGAAGTTAATTTAG
ATTTGATGAGTGCGCAAAACAAGCTTTCCCCGATTAAGGGAGAATACGAAAGGCCAGTCT
CGAGGATATCATTCGCTCCTGATTACAGCAATGAAGTAGTTACACGCGGTATCAGCGTAC
AGGGTTGCAGGAATCTACTAGAACACAGTGGGGAGAGCAGTTATGAGTCTCTTACCGAAA
GCAAGACTCTTAATGATATTGATAACCATTTAGATAAACTTAAACTCCAAGAGGATGATA
TGAACACAAAAAATCCTATTGTCCCCTCGCTGGTGCCGATCGAAAGCCCGGTAGAACCCC
CCGCTCCGCCACCTGTGCCGAAACCGAAGATGTTCAACACAGAAACGGAGAAACAGAGGG
ACTATATATCGTATCCTCGCCAGAGTCCGTTCTCTCCTCGATACGTGTGTGACGAGGACG
AATGCAGCGTCCAGTCTTGCCTCAGCCAGTTCACAGCGCTGGAACTGCTGACCGGTAATA
ACAAGGTTAGCTGCGAAACCTGCACCGAACGCACCAACGGCAAGGACGGGAAGACCGTTT
ACACGAATGCGACGAAACGTTTCCTCGTGTCCAGTCCGCCGGCCATACTGATTCTCCATC
TGAAGAGGTTCCAGATAGGTCCGCGTTGCATGTTCAGGAAGATGGCAAAGCACGTCGACT
TCCCGACGATCCTCGACCTGGCGCCATTTTGTGATATGAACAAAGTGAGGAAGTTGCCGA
ACGCTAGCGGTTGGCAGAACGAAGTGCTCTATTCGCTGTACGGTGTGGTGGAACATTCTG
GAAGTATGCACGGGGGTCATTACGTCGCGTACGTGAAGGTTCGCCAGCCGGTTAAGGCCG
GGGATGCGAGATGGTGGTTCTTGCCGAAGAGCGCGAACACTATGTTGGCTAAAGCTGGTC
GGGGTGACGGTGACTCTGAATCAGAGTCAGACCTGTCTGGATACGAGTCTGGCGAGGGTC
CATCGTCAGTGGCTGAGCCACCATCCGGCAAATGGTATTACGTATCAGATAGTATGGTAT
CGGAAGTCACGGAGGAGAAAGTGCTAAGGGCGCAGGCGTACCTCCTGTTCTATGAGAGAA
TTTTATAAACGGTCTCTCCCCGGATCCCGATGTGGAACTCTAGGTAACTGCGAACAGTCG
TGTAACAAGGGGTGCAATAGTCGTTAACTTTTGTTAACGTACTGTATACACACAATATGT
CCTTTGTATTCTGTTACTCTTTATTAAGTTTTACGTTATAACAAGTAAGACTATTCTGTA
TTATCAAACGTGACGATGATTATTTATTTGAAATACTTTTTTTTGTTATCTTATTTCACC
CGGTTTTCATTAGTATCGATACATCCAAATTAATAGGAGCTTTTTGATGGTCACACACAC
ACAACTCATGTTGTCAGTTTAATGGCCTAATATTCCTTTTGGCATTTAAGTGGAAGACTG
ACGCTTGAATTTTTTGTTTTGTTAATGACTCTTCAATCCGTATAATTATCGACTTTCAGT
AGTGGTCAGATCGAAAAAAAATTTTTGCCTGAGCTTTCAATGAAGAATAACCACTGTTAT
TAACAGAAAACAGATTGGTAGAGCATTTTCATATTTGTTACTGTGTCTATATCAATCACA
ACTTGATAAATATATAACCGGAAATTATAAATGTTTTGGCGTAATATTTGAGAGTCGGTA
ACTCTAGTAGTTCATTATTTTACGTCGAATCGTCACTTAATATCGATTGAGATTGTGCTC
AAACGCCTATATAAAAAAATAGAAAATCGATAACTTCTTTTATAGTGTCAGTGTGAAAAA
CATATGTATATGTTCGTCCCCACCTTATTATTGGGTGTCATACCATTCGCATCTATAACT
CGACTTCACATATATCCGCTATTTTCCTATGAAAAGTTCCTATCAAAGATTAATTACACT
TATTAAGAGATCTTGAGAATTATATCGTGTTTCAATGGAAACTATTCCTTTGAGCAAAAT
AAAACGGCAACACCGGCTTCTGTTTCATAGAAGATAAAATAACTATGGTGCTTCAGTATT
CAGTCGATATCTGCGCATATCTGGTCGAAGTTATAGAGCCCTGGAACCAAATTGGGGAAC
CATTCTCATTTCAATGTTTTTTTCTCTCTGTACTATGTAAGTTTAACGTTTGAACGCGAT
CTCATCTGATGTTAAGTGAAGTCTACTGCCATTCGTCTTCAGTTCTTTTTTAATATAGGC
CACAATTAACTAAATGATTGTCCTATTAAAGGCTATATAACAAGGAAAATGATTCTCAAA
CTGATCGACCCCTCCCCAATTGTCATTCAATATATAATTTATAACGCAAATCGCTTTTGC
TTTATTGTGGTCTTCCATTAAAGTGTCAAGTGTACTATATTTAATACTTAGAAGTTAGTT
TCCTTATGCTTGTAATCAACGTGCATTGTATTAAATTATGAGGGGGTATATTCAAAATAA
ATCAATTATTTTTCAACGAATAACTCTTGATTTTCTTTCAATTCTTGTAACTATTTTGAG
CAATTGTGTTGTTTTATAAAGCTTAACTTTAATATTTTAAAA
(4542 bp)

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