SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38865_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		ras-related_protein_Ral-a_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007464 P R3/R4 cell fate commitment
GO:0008152 P metabolic process
GO:0008593 P regulation of Notch signaling pathway
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0022604 P regulation of cell morphogenesis
GO:0030165 F PDZ domain binding
GO:0045087 P innate immune response
GO:0045824 P negative regulation of innate immune response
GO:0046329 P negative regulation of JNK cascade
GO:0050829 P defense response to Gram-negative bacterium
Transcript
Level		FPKM:19.46 TPM:18.85
ORF EntryO_SariASG16496_complete:A_SariASG_c38865_g1_i2
Sequence
(Nucleotide)
CGTGTTTGACAATTGACAGATTCGCGTATTGTGAGTATTGTGAAAGACTATTTTTTTAAA
AGTAAATAAGGATAATTTTTAACTGCTACATTATCCAAGAAATCTCATCACCACCGTTTT
ATTTGCATCTTGTTCGTGGGTGGTTCCGCGGCCCGCTGCAGACATGTCGAAGAAGCCGGC
CGCGCAGCCGACGCTGCACAAGGTGATCATGGTGGGCTCAGGGGGTGTCGGCAAGTCCGC
GCTCACTCTCCAGTTCATGTACGATGAGTTCGTCGAAGACTATGAACCCACTAAAGCAGA
CAGTTATAGGAAGAAAGTAGTGTTAGATGGTGAAGAGGTCCAGATCGACATCCTGGATAC
TGCGGGACAAGAGGACTACGCTGCTATTAGAGACAACTATTTCAGGTCTGGTGAAGGGTT
TCTATGCGTGTTTTCAATCACTGAACCAGAGAGCTTCGATGCCACACAGGAGTTCAGAGA
ACAGATCTTGCGCGTTAAGAACGACGAGAACATTCCGTTCCTGCTGGTCGGCAACAAGTC
GGACCTGGCGGACAAGCGGCGCGTCCCGCTGGAGGTGTGCCGGGAGCGGGCGCAGCAGTG
GCAGGTGCCCTACGTCGAGACCTCAGCCAAAACCAGGGATAACGTCGATAAGGTTTTCTT
CGATTTGATGCGCGAGATCCGCTCACGCAAGTCGGACGACAGCCGCGCGACCAACGGCGA
CGTCAAGGGGAAAAAGCGTAGGAAAATCAAGTGCGCCATATTGTAGGCCTCGAGACCTAG
GCACTATGCCCGGGTCGGGACGAGCTGTGCGTCAGCCCGGGGCACCACTATCTAACAGAC
AGGGATAGTTTTGTCACTTTTACATTGTATTCTACTTGAATAGCTATTTTATAATCATAA
TAGAGGTTGACTCTTTACTCCATTGTTGTGAAAGTTGTCTATTGGATTATACACGAGTTT
TATTTATATATTTTTTAGAAAATAAATTAATATCTGCAAAATAGAACAGATTATTTTCCC
TCACAAGGATATAAACTATATTATTTAAGTCTTTATCAATATATTTTTGATATTAACGAT
AACGACTATTTATTACGTATCCTGTATATCGATATTATGGTGATATCGATTTGATATAAA
GAAATAGTTAATATTTACATGTATAAGGGTGCTCAAATTTGCTCATAATAATTAAAATGT
GACAAAATACAATGTAAAAGTTACAGTACAATGAGTGTAGTAGCGCTGAATCCTCCCCGG
GCTCCGCCCCCGCGTCCGCTCCTCCGCCAGTCTGTCTGTTAGTGTGTGTGTGTGCGTGTC
ACAGTGTATACACAGTGTCCGAGTTTGTCCAAATAATCTCACGCTTTGCACGTGTCGGTG
TTCACTCGCATTTATTACATTAATGCTGGACTTATACGACGAGTCTATTTATCAATGAAT
GTTGTATACTGTTATTACAATGATATCATTTCAGTTGTCGATAAAATTATGTTGTCACAT
TTGTTAAATTTTCATCGATAAGTTCACCGAATGCAACTGAACACCGTATATGGGAAACTA
TAATATGTATCGATAGTTGTTAATAGTGTAAGTTTATGTAAAAATATGATATTTCGCCCA
TCTCGGTGCTGACAATTCCGGAAACTGTATCCTTGTGAAATGCCAACAGAACACATTGAG
ATTGTTTTATTGTATTATTATTATTTGTAAAAGACGGAGTAATCTCAACGAGCGAGAAAT
CTCAATTTTTGGAACCGTTTCCGGTAAATGGTATTTAATCGTATTTAAGCTTCTGCTTGG
ACTTTATTCTGTACATGGATACATTTTATGTGAGAGTACATACATAATATGTAGACATTC
GTACTTGTCGGAATCACGATACAAACAAGAGGCGATGTTGACTTGAAGTTTATGTACATA
GTAAAAACAATTCAATGAAAATAACCAATGCAAAGTTTTAAAAAGGAAGAGAGAGATATT
TGAAAAATAAACGCACGTTTATCGATATTTGAATACAGAAAGAGTTCGTAGGAATTTGAA
ACAAAAATATTGTTATGAACTGTATTTAAGATGTTATCGAAATGTATCGCTTGTTGTCAA
CAATGTGCTTGAGCGAGACGAAGAGGGTGCGGGGAGCGCATGAATGTTTAGTTTTTTTAT
TGTATTTATTATATTATAAATAAGCTATAAATGTGAAACGCGTTATTATTCTCACCGCGC
TATATTATAACCGTAGAGATGTAATCGGTAAGTTTTATTTTTATGAAGATTTTTATGTTA
TTCGATTTGCCAATTTTGAGAATTATAAAATTATACTCCTGATTAAAATTCCTACAAGTA
TCACTTGAATTATTGCATCTTATTGAAGCAAGTGATTATTTTTAAGTTGTTACATAGTTT
TGTCTGCGCCTCGAGAGATCACTTATTTGTATTCTGTTAATTAAACTGGGTAATATTGTT
TCGTAATTCACGATATAGATCCCGAAGCGTGTAGTTTCATGTTAACTCAAGCACCACCAG
AACTCGAACCTTATATACGAGGGGCCATCATAGTTTTCTGGCCAAGGGCCACATAGGTCA
ATGGTACCTCAACCATGGTGAGTGCACTTTTATAGATTGGGTTATTGGAACCCATGCAGT
TTACATTAATGCAATGTTATTTGCTAGAAAATAGTTAACAGAGACACAATTAAATTCCAG
AATTACGATGTTCACTGTTAAGAGAAAGATTTGTCTCTGAAATTTGTTTTTTTAAATCTC
CTGTTAGCTGAAATTAATAAAACAACAATTTTTACATAAACATTTGCCACGGTACAATTA
GATTCGTTAAGTTCGTAATTATTTTAAACGGAATCTTGTACATTTATTTATATCACTAAA
GAATGTATTTTGTATTTAATGGCCTGAATTACCACACTCCTTATTATTTTAGAGTAAAAA
TGGAAAGAGTTGTTCATGCATGCGACTTTTTTATCGGTAAAGTGTTGGAAATGACTTGGG
AGAGTAAACGTAGCTTTAATATCGATTATCGGATAAGTTATGTTAGTTGTACTGGACCGC
ACTATACTATGAGTCCCACGTGTCTGTATCCGTCACGTTAGATATTTGCTAGACTACATT
ATTTTTACGCGAATTTTCGCCACTCTGCAAAGGAAATAATAAGGAGGTCAGATCGG
(3176 bp)

- SilkBase 1999-2023 -