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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38860_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine-arginine_protein_55_isoform_X2_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0016607 C nuclear speck
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035062 C omega speckle
GO:0035327 C euchromatin
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.46 TPM:7.22
ORF EntryO_SariASG16478_complete:A_SariASG_c38860_g1_i1
Sequence
(Nucleotide)
GTGCTTGATTTCCGGATTCTGGTCGCTGACGTGCACGTGGTGAATGCTAGTTTTAAAAGT
AAATCAAAGTATTTCTGTAAAAATAATAACAAAACTTTGATAAATTGAACATTGATTTCC
ATAAGTGTTGATTCTTAGTGTCGACATTAGTAGCAAGGTGGACGAATCTGGCGCTAATCG
GAATAGCGCTAGCAAACCGATGAGCAAAACACAAAAAATGGTGGGCTCTCGGGTCTACGT
CGGTGGTCTCCCTTTTGGTGTGAGGGAGAGGGACCTTGAGAAGTTCTTCAAAGGTTTTGG
AAGAATTAGAGATATTCTAATCAAGAACGGTTATGGATTTGTGGAGTTTGAAGATTACAG
AGATGCTGATGATGCTGTGTATGAGTTGAATGGGAAAGAACTGCTTGGAGAAAGGGTGGT
CGTGGAGCCGGCCCGGGGAATCGACCGGAGCGCAGACCGGTACAGGCGAGATCGCTACTC
AGAGCGCGATCGCGATCGAGGCCGATCACGATACGATGACTACAATTATAGATACGGACC
ACCGACGCGTACGGAGTACCGACTTATTGTTGAAAATCTTTCTAGTCGCATTAGCTGGCA
GGTAAGAACACAATGATCTATTACCGGATTCAATCATCATTCCATTACTCATCATCCAGG
GTTCCTGAGCTGAAATCACTTTCAAACGGGCATGCTGCTGACGTAAACAAAACGACATGA
TATTTAAATCAAGGAGTGTATCAAAATCTGACTAAATATCAAGACGTTGGATACCGAACG
GCACAAGGAATTGGGGATGAATTGAAGATAACCTTAAACACATAGAAGAAGGATAGATAT
TACAAAAGGGAAGAAAATACATTGCAATGGGAAAAAAAACACAGAAAACTATAGACAGTG
ACAGGATTATATCTATGCCATGTAAATTACAAAGAGCTACACACAGACAGAATGGTGCAG
TGAGTGACTGGATCATTGACCGCTCTCAGGACATCTGGACCACTCTACTAACTAACATTA
ATTACTCACAACTTATTATTTAGAAATTAAAAAATTAAAAATATTTAATTTAATATCAAG
CAAAACTATTGTCAAGTAAAAGTTTTTAACTTTTGAAGTAAAAAGTCCAGTTTACTTATT
ATTTCTTATTGCCTTATAAAGAGATAATATATTAGAAATATTTTTTTGTTGTACAGTACT
TAACTTACCGAGCTTATAGAATCATTTTTGAAGGTGGCCAGTGCCCTCGGTGTGCTCTAG
CTGTGTGTGAGATGTGGTTCTGAGGGGCGATGTTAGAGATATCTGTGTCCCGGCTGGTCG
ACCCGTGCCGTCCTCCCCCGATGTGTGACCCGGATGTGTGACACCGGTGTGTGACCCCGG
TGGTGGCCCCCGGTGTGGTGACCCCAGCCCCCGACCCGCCGCGCCGCACTCGCCCCAAGG
ACCTGAAAGATTACATGCGTCAAGCTGGTGAAGTGACCTATGCTGATGCTCACAAACAGC
ATAGGAATGAAGGCGTGGTCGAGTTCGCGACTCATTCGGACATGCGAGCGGCTATCGAGA
AGTTGGACGGGACGGAGCTGAACGGACGGAAGATTCGACTCGTCGAGGACAGACGTTCCT
CCAGGCGTAGGACGAGGTCCTCGTCGAGCCGGTCGCGCAGCCGCTCTCGCGACCGACGCC
GTAGCCGGTCCAGGTCGCGTCGTTCGTCACGTTCCAAGTCACGTCCGAAGAGCAAGAGTC
CAGCGGCCAAGTCTCGATCACTATCCCGCTCCAAGGATAGAAGTCGTTCGAAGTCGCGGT
CGCGGTCGGCGTCTCGTAGATCGGAACACCGTTCGGAGTCGGGACGGTCGCCGTCGCGCA
AGTCCGCCGACAGGAACGGTCACCGTTCCACCTCCAGGTCCAAGTCGAGATCGCCGAAAG
CTGATTCCAAGGAAAGATCGCGATCCCGTAGCAAGGAGCAGCAGTCTCCGAAGCGTGAAG
AGGAACGTCGGAACAGCAAATCTCGTTCCCGTTCTCGATCCCGGTCCGGATCCCGCGAGC
GGTCGCACTCCCGCGACCGGTCTCAATCCCGGTCCCGGTCTCGTTCCTCGCACAGGCAGA
ACGGCGAGCCGCAAGATCGAGCCAGCACGGACCGTTCACCGAGAAGCGGTGAATAAAACA
CGTTATTGTTTATTAATAAAGATACATGCTAGATTTTTAGTGTTTCCTTATTATTAATTC
TTAAGGACTTTGTGACCTCATCGCTGTAACCTTGTCTAGACTTTGGTGTAAATTGTTAGT
ATTGTTGTTTATTTCCTACTAATCGATAACTAAAATTGTCAATAAATATAATTTTGTTTT
GTGTTTCAAAATTAATTTTCTATTTTTTTTTTATAAGAATAGTTAATGTACTTTCTTTTA
GTTAATTATTTGATGTATGTTATTAGTTTGCACATGTCGGTATTTTCTAATAACAATTAT
ATGTAAGTTTAACTTCTTTTTTTCTTTCTTTAATCTTTGGGGTCAGAATTGTATTAATGT
TATAAGATGTTTCTATGTATCACGTGCACTTAGGTTTGATCACTCACTAAACAATGTTCT
CATTGTCCTAGAATTATATAAAAAACTTAGCGTGGACAAGGGATAACTTTAATTATTAAA
TTTTAGAAAGTTTCGCAGGAAATTATTGTAATATTTAGGACAATTAATATATTATAGTGT
GTTAAATTTAAAAAAGTGAATTCTAATTATATACGAAAACCATATGAGATGAGCCAATCC
GTCATTCAACATCATTGAAGGAAATTGTGAAAGAAACTTCGTATGATATTTATAATTTGC
TTATATTGAAACGAAGATTTTTCGTTGGATAAAAGAAATATATGATTGTACTTTGTAAAT
AGTTCATTTCTTATTTTATTACCAAATAAATAAAAACTTAAGATTTAAAAAAAAAAAA
(2938 bp)

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