SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38721_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		putative_RNA-binding_protein_Luc7-like_2_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0016607 C nuclear speck
GO:0019899 F enzyme binding
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:7.96 TPM:7.71
ORF EntryO_SariASG16147_3prime_partial:A_SariASG_c38721_g1_i5
Sequence
(Nucleotide)
CCTAATATGAAATTTGTGCGTGTAAGTTTTGGTGTGATATTGGCACACGGCGTTAAATTA
CTATAGGTGTAAGCGTTACGTTCATATAAAAATTCCAGGATTTATTCAAAACGCTGTCAG
TAGACTTTATTCAATATGTCTGCCCACGAGCAAATGAGGGCAATGTTGGATCAATTGATG
GGCACTTCAAGAAATGGTGAAACAGATAAGCATGGGGTTAAATTTTATGATGACTCTGTT
TGCAAATCATTCTTATTGCAATGTTGTCCACATGAAATCCTTTCATCTACACGTATGGAT
CTGGGTGAGTGTCCAAAAATTCATGACTTGGCCCTTCGTGCGGATTACGAATTAGCATCA
AAAACCAAAGACTATTTCTATGACATTGATGCGACAGAACACTTAGAGGCTTTTATAGCC
GATTGTGATCGCCGGACAACCGCAGCCAAACAGCGTCTAGCTGAGACTCAAGAGGAACTG
TCCGCAGAAGTGACTGAGAAAGCGAACTCCGTACACGAACTTGCTGAGCAGATTGGTCAG
AAGTTGGCGAGGGCCGAAGCACTCGGAGAAGAGGGAATGGTTGAAGAGAGTGTTAAACTA
ATGGGAGAGATTGACGAGTTGCGTAAAAGGAAAGCGGTGGCGGAACAGGAATACCGTAAT
TCGATGCCCGCGTCGTCATATCAGCAACAAAAGTTGAGAGTCTGTGAAGTCTGCTCCGCG
TATCTCGGTATTCACGACAACGATAGAAGATTGGCGGACCATTTTGGAGGGAAACTTCAC
CTTGGATTCATTACTATTCGTGAGAAATTAACAGAATTGAAGAAAACTGTTGACAAGAGA
CGCGATGAACGTGGTGCGTCAGAACGCGAGCGCGGCGCCGGTAGACGTCATTACGTAGGC
GGACGTGAGCTGGACAGGCGGGCGCGGAGACACCGCGAGTCCGCACGAGACCGCGGCGAT
CGAGACCGAGGCGAACGAGACCGCGGCGAGCGAGACCGAGGCGACCGAGACCGCGGCGAA
CGAGACAAAGACCGTGAACGTGAACGCAAACGTGGCAGCCGATCGCGCAGTAGAAGTCGA
CAGGGAAATTC
(1091 bp)

- SilkBase 1999-2023 -