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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38706_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_lysine-specific_demethylase_6A_[Helicoverpa_armigera]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001701 P in utero embryonic development
GO:0001843 P neural tube closure
GO:0003007 P heart morphogenesis
GO:0003016 P respiratory system process
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007507 P heart development
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0021915 P neural tube development
GO:0031490 F chromatin DNA binding
GO:0032525 P somite rostral/caudal axis specification
GO:0035097 C histone methyltransferase complex
GO:0035264 P multicellular organism growth
GO:0042802 F identical protein binding
GO:0044666 C MLL3/4 complex
GO:0046872 F metal ion binding
GO:0048333 P mesodermal cell differentiation
GO:0048568 P embryonic organ development
GO:0048570 P notochord morphogenesis
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0060070 P canonical Wnt signaling pathway
GO:0071557 P histone H3-K27 demethylation
GO:0071558 F histone H3-tri/di-methyl-lysine-27 demethylase activity
GO:0072358 P circulatory system development
Transcript
Level		FPKM:1.39 TPM:1.35
ORF EntryO_SariASG16110_3prime_partial:A_SariASG_c38706_g1_i4
Sequence
(Nucleotide)
TTTACCACCGATGCGTGTCGTTGGGAGAGGCCGCGGGACGTGCCCGGGCTGCTGTTTGGT
GTCTCCAGCGAGCTGTAGCCGCGGAACCAGAGTCTGGAGCCGGCCTCTATTTGTTGGGCA
GGTGTTTCGCCGCCCAAGGGAAAGTCCACGACGCGTTCATTGCCTACAGGAATTCTGTCG
AGAAATCTGAAGGAAACGCGGATACTTGGTGTTCCATAGGTGTATTGTATCAGCAGCAAA
ATCAACCGATGGACGCCCTTCAAGCGTACATATGCGCCGTCCAGTTGGATAAGGGACACT
CGGCCGCTTGGACGAACTTGGGCAGTTTGTACGAGAGCTGTCAGATGCCGCGCGACGCGT
TCGCTTGTTACACGAACGGTGGTACGGCGGCGACGGCGTCGAACGCTGCGCTCAGGCAAA
GGCTTTCCTTCCTGAAGGCGCATCTCGCGCACGCACCTATGCCCTCGGTTACCGGCAAGC
GACGTCCACTGCCGTCTATAGAGGAGGCTTGGAACTTACCTATATCGGCGGAGATGTCGT
CACGCGCCCCCAAGTCCGCCCCACCACCGTACCCCGGCAAGCGCGCTGAGGAACCGCCAC
CACTCTCCCACCACCAGCTCCAAACGCTGCACTATCTCCAGAAGAACTCGCACAACCTCT
CACCCCACCAGCAAGCGTTGATGCAGCAACTTCTATCGCAGTATCGTTTGACTCAAACGT
CGAGGGCGCGTACGGTGACGAAGAACGAAAGCGGTGGTGGTACCGCGACCGGCGGCAGCG
GCGACAGTACTGAGTCGCTCGCAGAGGATCTGCTGAAGAAGTTTGCAGACTCACAACCGG
ATATTAAGAAGGAACCGGTAGTCAATGTGGAAAATTCGAGCTGTAGCGGTAACAATGAGG
CGATGCTCGGAGGACGGCAACCCGTCGTAAAACTGGAACCATTGAAAACGGACCCACTCA
AACCTGTCAACTTTCACACCGGCATGAATTCTAAACAGATATTGGATGCGTGCAAGGAAA
ACGCCGGCCCACCCACAGCGTGGTCCGTGTTGGGTGACGGGTGCGGACCACCGGAGCCGC
CTTCAGTGCCGCCGCCGCGACTCACGCCGGAGCAACTCGCTCCGCCCGCGCCGTTCGTCT
ACGTCGAGTCGAAACGTGAAGCCTTCTCGCCGCAGTTACAGGACTTTTGCCTGAAACATC
CGATCGCGATGGTGCGCGGACTCACCGCCGCGCTCAAACTCGACCTCGGCCTGTTCTCGA
CGAAAACGCTAGTGGAAGCGTGGCCTGACCACGCGGTCGAGGTGCGCACGCAGCTCATGC
AGTCCGCCGACGAGAACTGGGACCCGACCGGCCGACGGCGCGTCTGGGCGTGCGCTTCAC
ACAGGTCGCATACGACTGTCCGCAAGTACGCGCAGTACCAGGCTGGCTCCTTCCAGGAGT
CGCTGCGGGAAGAACGAGAGCGCGGCGGAACGGCCGGACCGCCTCTTTCAGACTCTGACG
GGTCTGGTCCCGTTAAAAGGCGTAGAGGAGCGCGTATGCTGCGCTTCGGCACCAACGTCG
ATCTCTCCGACGAGCGCAAGTGGCGGCCGCAGCTCGCCGAACTACAGAAGCTGCCGGCGT
TCGCTCGCGTCGCCTCCGCTGCCAACATGCTGTCGCACGTCGGACACGTCATCCTCGGTA
TGAACACGGTCCAGCTTTACATGAAAGTGCCCGGGAGCAGGACACCCGGCCACCAGGAGA
ACAACAACTTCTGTTCGATCAACATCAACATAGGACCCGGCGACTGCGAGTGGTTCGGTG
TCCCGGATGCGTACTGGGGAGGGGTTCGCGACCTCTGCGAGAGGCACGGTCTCTCCTACC
TGCACGGGTCGTGGTGGCCGGACCCGGAGGAGCTGCGCGCACACGGCGTCCCCGTGTACA
GGTTCACGCAGCGGCCCGGGGACCTCGTGTGGGTGAACGCGGGATGCGTGCATTGGGTTC
AGGCGACCGGCTGGTGTAACAATATCGCGTGGAACGTCGGCCCGCTGACGGCGCGGCAGT
ACTCGCTCGCGCTCGAACGGTACGAGTGGAACAAAGTACAAAATTTCAAATCGATAGTAC
CGATGGTTCACCTGACGTGGAACCTGGCGCGTAACATCCGCGTGTCCGACCCGAG
(2155 bp)

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