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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38701_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		putative_receptor_tyrosine_phosphatase_type_r2a_[Danaus_plexippus_plexippus]
Ontology
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007283 P spermatogenesis
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0008360 P regulation of cell shape
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0031290 P retinal ganglion cell axon guidance
GO:0032093 F SAM domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045467 P R7 cell development
GO:0048477 P oogenesis
GO:0048675 P axon extension
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0051124 P synaptic assembly at neuromuscular junction
GO:1903386 P negative regulation of homophilic cell adhesion
Transcript
Level		FPKM:1.82 TPM:1.76
ORF EntryO_SariASG16088_5prime_partial:A_SariASG_c38701_g1_i3
Sequence
(Nucleotide)
CTCTTCCGATCTCAAAACAATACGTTCCCGGGGCGCCTCCGATGAATGTGACGGCCGTGG
CCATATCTCCTACCGCTATCCGTGTATCCTGGCAACCGCCTCCCGCGGAGCGAGCTCACG
GAAGGATCGCTTACTACAAGCTGTTGTGTGTTGAATCCGGGCGAGGGGATTCCGAAGCGA
CTGTTGTGAAACTTAATCAGACGTCTTTTGTTCTGGACGAGTTGAGACGTTGGACGGAGT
ACAGAATTTGGGTGTTAGCCGGCACTAGCGTGGGAGACGGGCCCTCCTCGTATCCGGTCA
CCGTTCGCACGCATGAAGACGTGCCAGGGGAACCGCAGGACGTCAAGGTCAGCGCCAACA
ACTTTACGTCCATTCACGTGACTTGGAAACCGCCTCAAGAAAAAGAGAAGAATGGTATTA
TTCGTGGTTACCATGTGCACGTGCAAGAAGTTAGAGAAGAGGGTAAAGGCCTCCTCAACG
ATCCAATGCGTTTCAACGTAATAGACGATACGACTCTCGAATTGAATATATCCGGTCTAC
AACCGGACACTAGGTACAGTGTGCAAGTAGCCGCATTGACAAGGAAGGGAGACGGCGACC
GAAGTGCGCCGGTGTCAGTCAAGACGCCTGGCGGAGTGCCAAATAGGCCTACCGTCAACC
TTAAGGTTTTGGAAAGGGAACCAATAGTATCAATAGAATTAGATTGGGCGAAGCCAACGC
AAACATACGGAGAGATC
(737 bp)

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