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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38601_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:23.86 TPM:23.11
ORF EntryO_SariASG15807_5prime_partial:A_SariASG_c38601_g1_i1
Sequence
(Nucleotide)
CATCTGGCCCCCGTTGTTACAACTGTAATCGATATGGTCATGTAAGTAAATTTTGCAATT
TTAAGAAGAAAAATAATGATAACGTGAAAGGTTATGCAGCTGTTTTTTCTGCAACTCAAG
AGCAAATGGACAATGTATCATGGATTGTGGACTCTGGTGCATCTCTACACATGACAAATA
TATCTGATGGAATGTATGACATCAAGGCACCTCCGATACATAGTATAATGGTTGCCAACA
ATGAATCAATCACTGTACAGCATATGGGTAATGTTGACCTAGATCTCCTGGGTGAAGACG
GTAACATGAACCATATACAGGTAAAAGATATTTTGTATGTCCCACAACTGAGTACTAGTT
TATTGTCAGTTAACCAGCTGATAAAGAATGGCTGTCAAGTATTATTTAATAAAACTGGTT
GTGAAATATTTAATAATCAGAAGAAATTAGTTGCTACAGCTAAGCTTACAAACAATATGT
ATAAGTTGAATACATTTAATAACAATGTTACATTTGTTGCAACTTCTGAAGAAAATAATT
TAAATATTTGGCATAGAAGAATGGGACATTTAAATTTTAATGATATAAAAAAATTGCCAT
TTTGTACGGATGGAGTAAAATTACTGGATAATAAAGATATAAATATTAAATGCATTCCTT
GTTTGAAAGGTAAACAAACGAGATTTCCATTCTCTAATAATGGTTCAAGGGCATCCAGTA
CATTACAAATAGTGCACTCAGATTTATGTGGACCTATGGAAGTTCCATCTATGGGTGGAG
CCAGGTATTTTATAACCTTTATAGATGATTTCTCGAGAAAGGTAAATGTATATTTTTTTA
AAAATAAAACCAATATAAAAGAGGTATTTAAAATATACAAAAATGAAATGGAAAATCAAT
TGGATTGCCAAATAAAAATTCTGAGAACAGATAATGGTCTGGAATATATTAATAATGAGA
TGTCTAAATTCTTATCAGGTTATGGCATCAAGCATCAGACAACAGCTCCGTATACACCGG
AGCAGAATGGGCTGGCAGAACGCATGAATCGTACACTTGTAGAGCATGCCAAATGTATGC
TGGAGGATGCTGGATTATCCAAGAAGTTCTGGGCTGAGGCAGTGGAAACTGCTGCTCATA
TAATTAACCGTTCACCGACTCGCGTCCTTAACAATGTGACACCACTAGAGAAATTGACAG
GTTTGAAACCAAATATTTCTTATTTAAGAGTTTTTGGGTGTAAAGCTATGGTGCATGTGC
CAAAGGAAAGGAGGTTGAAGTGGGATTCGAAATCAAGAGAAATGATATTTCTTGGTTATT
GTGAAAATACCAAAGGGTACCGATTGATGGATCCACACACTCAGAAGGTTACTAAGAGCA
GAAATGTCATATTTATAGAAGATGGGCAGAATGATAAAAAAGTTTTATTGCCAAATGCTA
ACATTAATACTCCATTAAAGACACCTATGCCATTAGATGAGGTTGTTGAGACCGCTGAAA
CTAGTGAAGCTGCCAACGCTACAACTCCTGATTCTTCCATCCACTCTACAGAAGATGAAT
CTAATAGAACTATATGTGAGAGTTTCGATTCTAAAGATGATATGACAGATCAAGATTCCA
CATATAAACCAAGCACTGATTGCACATTTAGTTCTTCTGACAATTTTGTAAACTTAAGGC
CCCGGGGAGCACGACCCAGGTATGTTTATGATGATAATGAAGATGAAGATGAAATTAAGT
ATGCATGTTTGGCTTTAAATCAGGATCCATTGACATTAGAAGAAGCTTTATCTAGCTCAG
AGTCTAGTCATTGGCAGAAGGCCATGGAAGAGGAGTTCAAATCATTAAAGAAGAATAACA
CTTGGGTGTTATGTGATTTACCAAACGGGAAGAGAGCTATATCATGCAAATGGGTTTTTA
AAACAAAGAGGAATGAGAGTGATGATATAATAAAGTATAAAGCCAGATTAGTAATTAAAG
GATGTTCCCAAAGGAAAGGATATGATTACAATGAAGTATACTCACCGGTAATTAGATATT
CATCTTTGCGTTACTTGCTATCTTTAGCAGTAAAACATAATTTAGATATCAATCAAATGG
ATGCCGTATCTGCTTTCCTACAAGGTGATATAGAAGAGGATATATATATGGTTCAACCTC
CAAACTTTGGGGAGAACAATACACAGGTGTGTCTACTAAAAAAATCTCTATATGGACTGA
AGCAAGCTAGTAGACAGTGGAATCAAAAACTGGACTGTACACTTAAAGAAATTGGCCTGA
CACAGTCACTACTTGATCCCTGCATTTACTATAAAATAAGGAATGAAGATATAACTTATT
TAGCTCTTTATGTGGACGATATAATTTTGTTTACAAATTCCCTGGAAACCAAAAATTATA
TTAAAAGTAATTTATTTACTAAATTTGAGATTAAGGACTTAGGTGAACTGAAATATTGTC
TGGGTTTACATGTACACAGAGACAGAGACAATGGGATTATATGTATAGATCAAGCAAAGT
ATATACAAGATATTCTGAGTAAATATGGAATGTTGAACTGTAAGAGTGTTAAAACACCAA
TTGACCCTAATACAAAGTTTAATATTAATAAAAATGAAGATTTAATTGCAGATAAATATC
CATATCAGGAAATAATTGGGTCTTTATTATATTTATCACAGGGGACTCGCCCTGATATAT
CATATGCTGTGAATACACTCAGCAGATTTAACTCAAAGCCAGATATGCAGCATTGGGTGG
CGTTGAAACGGATATTGAGATATTTAAAATTTACAGTAAAATATACACTTACTTATAAGA
AAAATCAAGGAAAAGGTATACATGGTTATTGCGATGCGGACTGGTGTAGCGATGAAACCG
ATCGAAGATCATGTACTGGCTATGTTTTTATTCATCAAGGTGGCGCAATTACATGGAACT
CGCGTCGTCAATCGACAATAGCGCTATCTACGACCGAGGCTGAATATATGTCTCTTTCAA
GCTGCACTCAAGAGGCAATGTGGCTTAAACAAATGCAAGACGAATTTTGGCCGCAATTAG
CAAATGAACCTGTAACTATATTGTGTGATAATCAAAGTGCTATTAAACTTGCAGGTACCA
TTAATTATCATCCCAGGACTAAGCACATAGATATACGACATCATTTTATACGTGATAAGG
TGCGTTTGAAGAAGATTGTTATCAAATATGTCCAAACGAGTGAGATGGTCGCTGATGCTC
TGACCAAAGGCACTCCTCAAATTAAGCTAGATTACTGTTCATCAAAAATGGGTTTATGTC
TAAGGGAGGATGATGGAATTTAGTCATAAACAATTGAAGAATACATTTATTTATTATCGG
TTGTTAGTATATCGTCTGTGCACGCGCCTCTCGCGGAGCTGTTTGTGTATTAACCTTTTA
TTCAAGTCACTTAATATAGTATACATATTCTCATAAAAGACTTTTATTTACATCAGGTTA
TGGGCCCAGAG
(3491 bp)

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