SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariASG_c38585_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_I_subunit_RPA1_[Bombyx_mori]
Ontology
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:12.94 TPM:12.53
ORF EntryO_SariASG15790_5prime_partial:A_SariASG_c38585_g1_i2
Sequence
(Nucleotide)
GATCGGAAGAGCGTACAGGGCAAGAATTTTAAAAGGTGAAAAAACTTTGAGATTGCATTA
TGCAAATTGCAAATCTTACAATGCTGATTTTGATGGTGATGAAATGAATGCCCATTTTCC
GCAAAATGAAATAGCTAGAAGTGAAGCATATAATATAATGTCAGTAAGAAAACAGTATCT
CGTCCCAAAAGATGGTACTCCCTTAAGTGGTTTGATTCAAGACCATGTTATTTCTGGAGT
AAGGATGTCCTTAAGGGGTACATTTTTTACAAAGTCAGATTATCAGCAACTAGTCTTTCA
AGCATTATCAACTCATAAAGGGCAAATTAAACTGCTTCCAGCAACTATTTTGAAACCCAT
TATGCTGTGGTCGGGTAAGCAAGTGCTGTCAACAATTATAATAAACACTATACCTAAGGG
AAAACCCCTTCTTTCCTTGGTAGGTAAAGCTAAAATTAGCTCAAAAGCATGGCAGAGAGA
AACCCCTCAACCATGGAAAAGTGGTGGTACTCCTTTTACTAATTCAGACACAATGACAGA
AGCAGAAGTTGTAATAAGAAATGGTGAACTATTATGTGGAGTGTTGGATAAAACTCATTA
TGGTGCAACACCTTATGGTTTAGTACACTGTATGTATGAGCTATATGGAGGAGACAGCTC
TTGTGCATTATTAAGCTCTTTCTCAAAAGTTTTTACATTTTACTTACAATGGATAGGATT
CACCCTTGGTGTTAAAGATATTTTAGTAGTTGAGGAAGCAAATAAAAGACGAGACAATTA
TGTTTGTCTTGTTCGGAATGCAGGTAAAGTTGCTGCTGTTAAAGCCACTGAACTGCCATT
AGATGTTGAAGAAAATAAGTTAAAGAATACTATTGAACAAATGTATGCTAAAGATCCTAA
ATTTAGAGCTAGTTTAGATCGACAATACAAAAGCATGCTTGATTCATATACTAACAATAT
AAATAAAGTTTGTCTCTCGGAAGGCTTACTAGAAAAATTTCCTTACAATAATCTTCAACT
GATGGTACAATCTGGTGCCAAAGGTTCAACTGTTAATACTATGCAAATTTCTTGTTTGCT
TGGTCAAATTGAATTGGAAGGGAAAAGGCCACCTTTAATGATATCTGGGAGATCGTTACC
TAGTTTCCCTCCATATGATGTTTCTCCGAGAGCTGGTGGGTTTATTGATGGTCGTTTCAT
GACTGGTATACAACCTCAAGAATTCTTCTTTCATTGTATGGCTGGTCGTGAAGGTTTGAT
TGATACTGCTGTAAAAACTAGTCGATCAGGTTACCTACAAAGATGTTTAATAAAACATTT
GGAAAGTTTATGTGTTGCTTACGATCACACAGTTAGAGATGCAGATGGCAGTGTCATTCA
GTTTGCTTATGGAGAGGATGGATTAGATGTACTAAAATGTCAATACCTTAAAGCTGATCA
ATTAGGTTTTCTTGATAAGAATTCTGATGCACTGGTTAGTAAAGGTGTACTAAAAAAGTT
AAAAAAAGATGCTGACTTGAAGGTTATTTCTAAGGCACAAAAATCATTTAAAAAATGGAA
AAAAAAACATGGAGATCCTCTAGAAAAATGCCGCGTGAGTGGATTTAGTCAGTTTTCAAT
TTTGGCAAAGAAAGATATAGAGCTAGAAGAAACCAAACGCAAAGAAAAGATTAGAAGAGA
TCCATATTATTGGGACTTAGAGAAACAATGGAGGTCTTTAGATGAAGAAGAAAAATTACA
ATACTCTAGGAAGTTATGTCCTGATCCAATACCAAGCAAGAGTTCCCCAGAGTACAAATT
TGGTGTGATTAATGAGCAGCTAGACGAACTTATTAAAAAATATTTAAAAAACAGAAAGAA
TGATCCATATGATCAGTGTACAGAAAAAAATAAATTTTCAGAGGTAATGAACGCCAAATA
TTTAGAATCAATGGTAGCTCCTGGGGAACCAGTTGGACTGTTAGCTGCACAATCTATTGG
GGAACCTTCAACGCAAATGACATTGAACACTTTCCATTTTGCTGGACGCGGTGACATGAA
TGTTACCCTCGGTATTCCACGTCTGAGAGAAATCTTAATGACAGCTTCTGCTAAATTAAA
AACACCAAACATGGACATACCATTCCTGAATATACCGGACCTGACAAAGAAAGCTGAAAG
ATTGAGGCAGAAACTAAACAGAGTCACTGTATCCGATGTTTTAGAAAAGATTGACGTTCA
ATGTGAAATAGTTACGAATCCGGAGAGGCAATTGAAGAGCACAATGCGGTTTACATTTTT
GCCACATTCGCAATATAAAACTCAGTATGCAGTCAAACCGGCGCAGATTATAAAACATAT
GCAGAATAAATTCTTTGATGAGATGTTCTCAATAATTAGGAAACAAGCGAAGGCGACTTG
TGGCGTGCTTTGGGCAACAGAACAGAAGAAGCAAAGGTCTAGAGCGAATGATGATGGAGA
TGATGATGATGCCCAGGAACCTCCTGAAAAAGTTGATAAGGATGACATTGATAGTTCTGA
TGACGATGCTCCGAACGATGATGATGATAATACAGCAGCTAAAATACACAACAAAAGAGC
CGAGGAACAAGAGTACGAAGATCCAGAAACGGATGAAGAGGAAAAATCTGACGATGAGAC
AGAATTCGTCGATAATCAACCAAAAGACAACGACGATATAGCTGAAGTTTCAGCAAAAGA
TATAGATCCTGATTCTAGTAAAATCATGTCAGATGTAGTGGACAGTTTGAAACACGCAAC
GAATTACAACTTCGATACGAAATCGCATCAGTGGTGCGAGCTGACCGTGTTGTTTCCAAT
TTCTTTTCTCAGGGTGGATTTGTCGCAGGCCCTGCGCGAAACCGCCGGCAAGTCTGTTAT
ACACGAAGTAAAACATATTAAACGAGCAATCACCAACAAGGAGAGAGACATACTGTATCT
TAAAACTGAAGGCATCAACATCTTACAGATGTTCAAGTATAACCATCTATTGGACTTGAA
TAAACTGTACAGTAACGACATACACGCGATAGCGAACACTTATGGCATAGAAGCAGCGAA
TAAAGTTATTATAAAAGAAATTCAAAATGTATTCAACGTCTATGGAATTACGGTTGACCC
TAGGCATCTGTCTCTAGTAGCAGATTACATGACTTACAATGGTATATTTGAACCGATGAG
CCGGAAGGGTATGGAAGCTTCATCGTCACCACTACAGCAAATGTCTTTCGAGTCATCGTT
GATATTTCTAAGGGACGCTGTATTGAACTCGAAGAAGGACCATCTGAGATCGGCATCCAG
TTGTTTGATGATCGGTCAGCCTTGTCGTAGCGGCACTGGCATGTTCACATTACAACATTA
CAGTGAAGTGAAGACATAAAATTATAACCTATATTGTTTTTATTATTGGCAATAAATCAT
TTTTACAGAAACAAAAAAAAAAG
(3443 bp)

- SilkBase 1999-2023 -